| Chain sequence(s) |
B: GPLAALRRALAEEMRERMEVMAAIVEQLFGKEKAEEFRKRLKALIERLLA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:14)
[INFO] Main: Simulation completed successfully. (00:02:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | B | 0.0766 | |
| 2 | P | B | 0.4860 | |
| 3 | L | B | 1.4781 | |
| 4 | A | B | 0.6430 | |
| 5 | A | B | 0.5936 | |
| 6 | L | B | 1.2912 | |
| 7 | R | B | -0.4211 | |
| 8 | R | B | -1.4838 | |
| 9 | A | B | -0.8818 | |
| 10 | L | B | -0.9967 | |
| 11 | A | B | 0.0000 | |
| 12 | E | B | -3.8152 | |
| 13 | E | B | -3.8643 | |
| 14 | M | B | -3.2634 | |
| 15 | R | B | -4.3130 | |
| 16 | E | B | -4.3969 | |
| 17 | R | B | -3.6102 | |
| 18 | M | B | 0.0000 | |
| 19 | E | B | -2.2947 | |
| 20 | V | B | -0.0271 | |
| 21 | M | B | -0.2297 | |
| 22 | A | B | 0.0000 | |
| 23 | A | B | -0.2851 | |
| 24 | I | B | 1.0282 | |
| 25 | V | B | 0.0000 | |
| 26 | E | B | -2.3654 | |
| 27 | Q | B | -0.8603 | |
| 28 | L | B | 1.1968 | |
| 29 | F | B | 0.8132 | |
| 30 | G | B | -1.6976 | |
| 31 | K | B | -3.8319 | |
| 32 | E | B | -4.1622 | |
| 33 | K | B | -3.6570 | |
| 34 | A | B | 0.0000 | |
| 35 | E | B | -4.9800 | |
| 36 | E | B | -4.5252 | |
| 37 | F | B | -3.6696 | |
| 38 | R | B | -4.2940 | |
| 39 | K | B | -4.1713 | |
| 40 | R | B | -3.6187 | |
| 41 | L | B | -2.8801 | |
| 42 | K | B | -3.1282 | |
| 43 | A | B | -2.2577 | |
| 44 | L | B | -1.3482 | |
| 45 | I | B | 0.0000 | |
| 46 | E | B | -2.7144 | |
| 47 | R | B | -2.3149 | |
| 48 | L | B | -1.1808 | |
| 49 | L | B | -0.6854 | |
| 50 | A | B | -0.7590 |