| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLISWDAPAVTVDHYVITYGETGAYWSYQEFTVPGSKSTATISGLSPGVDYTITVYANPYSDAPIYYSYHSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:59)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8144 | |
| 2 | S | A | 0.7585 | |
| 3 | S | A | 0.5678 | |
| 4 | V | A | 0.3931 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.5531 | |
| 7 | K | A | -2.5826 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.7248 | |
| 10 | V | A | -0.0212 | |
| 11 | V | A | 1.7375 | |
| 12 | A | A | 0.7161 | |
| 13 | A | A | 0.5362 | |
| 14 | T | A | -0.0765 | |
| 15 | P | A | -0.5476 | |
| 16 | T | A | 0.0401 | |
| 17 | S | A | 0.0000 | |
| 18 | L | A | 1.1101 | |
| 19 | I | A | 0.0000 | |
| 20 | S | A | -1.0256 | |
| 21 | W | A | 0.0000 | |
| 22 | D | A | -2.4338 | |
| 23 | A | A | -1.1134 | |
| 24 | P | A | 0.1071 | |
| 25 | A | A | 0.5458 | |
| 26 | V | A | 0.6964 | |
| 27 | T | A | 0.0323 | |
| 28 | V | A | -0.3488 | |
| 29 | D | A | -1.1261 | |
| 30 | H | A | -0.8905 | |
| 31 | Y | A | 0.0000 | |
| 32 | V | A | 0.0000 | |
| 33 | I | A | 0.0000 | |
| 34 | T | A | -0.8152 | |
| 35 | Y | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | E | A | -1.1352 | |
| 38 | T | A | -1.1109 | |
| 39 | G | A | -0.3831 | |
| 40 | A | A | 0.4634 | |
| 41 | Y | A | 1.7340 | |
| 42 | W | A | 1.6315 | |
| 43 | S | A | 0.3855 | |
| 44 | Y | A | 0.0116 | |
| 45 | Q | A | -1.4531 | |
| 46 | E | A | -1.9427 | |
| 47 | F | A | -0.6174 | |
| 48 | T | A | -0.2447 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.1405 | |
| 51 | G | A | -1.3074 | |
| 52 | S | A | -1.3276 | |
| 53 | K | A | -2.1210 | |
| 54 | S | A | -1.3738 | |
| 55 | T | A | -0.8954 | |
| 56 | A | A | 0.0000 | |
| 57 | T | A | 0.3844 | |
| 58 | I | A | 0.0000 | |
| 59 | S | A | -0.4538 | |
| 60 | G | A | -0.7155 | |
| 61 | L | A | 0.0000 | |
| 62 | S | A | -0.9177 | |
| 63 | P | A | -1.0162 | |
| 64 | G | A | -1.1755 | |
| 65 | V | A | -1.2001 | |
| 66 | D | A | -2.5177 | |
| 67 | Y | A | 0.0000 | |
| 68 | T | A | -1.0191 | |
| 69 | I | A | 0.0000 | |
| 70 | T | A | -0.1933 | |
| 71 | V | A | 0.0000 | |
| 72 | Y | A | 0.4164 | |
| 73 | A | A | 0.0000 | |
| 74 | N | A | 0.0000 | |
| 75 | P | A | -0.0184 | |
| 76 | Y | A | 0.4477 | |
| 77 | S | A | -0.6247 | |
| 78 | D | A | -1.3481 | |
| 79 | A | A | 0.3134 | |
| 80 | P | A | 0.9835 | |
| 81 | I | A | 2.1548 | |
| 82 | Y | A | 2.5537 | |
| 83 | Y | A | 2.2612 | |
| 84 | S | A | 1.3199 | |
| 85 | Y | A | 1.2269 | |
| 86 | H | A | 0.0352 | |
| 87 | S | A | -0.1596 | |
| 88 | P | A | 0.0474 | |
| 89 | I | A | 0.0737 | |
| 90 | S | A | -0.4571 | |
| 91 | I | A | -0.7516 | |
| 92 | N | A | -1.6736 | |
| 93 | Y | A | -1.5137 | |
| 94 | R | A | -2.5769 | |
| 95 | T | A | -1.0893 |