Project name: query_structure

Status: done

Started: 2026-03-17 01:18:03
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLISWDAPAVTVDHYVITYGETGAYWSYQEFTVPGSKSTATISGLSPGVDYTITVYANPYSDAPIYYSYHSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:01)
Show buried residues

Minimal score value
-2.5826
Maximal score value
2.5537
Average score
-0.2446
Total score value
-23.2343

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.8144
2 S A 0.7585
3 S A 0.5678
4 V A 0.3931
5 P A 0.0000
6 T A -1.5531
7 K A -2.5826
8 L A 0.0000
9 E A -1.7248
10 V A -0.0212
11 V A 1.7375
12 A A 0.7161
13 A A 0.5362
14 T A -0.0765
15 P A -0.5476
16 T A 0.0401
17 S A 0.0000
18 L A 1.1101
19 I A 0.0000
20 S A -1.0256
21 W A 0.0000
22 D A -2.4338
23 A A -1.1134
24 P A 0.1071
25 A A 0.5458
26 V A 0.6964
27 T A 0.0323
28 V A -0.3488
29 D A -1.1261
30 H A -0.8905
31 Y A 0.0000
32 V A 0.0000
33 I A 0.0000
34 T A -0.8152
35 Y A 0.0000
36 G A 0.0000
37 E A -1.1352
38 T A -1.1109
39 G A -0.3831
40 A A 0.4634
41 Y A 1.7340
42 W A 1.6315
43 S A 0.3855
44 Y A 0.0116
45 Q A -1.4531
46 E A -1.9427
47 F A -0.6174
48 T A -0.2447
49 V A 0.0000
50 P A -1.1405
51 G A -1.3074
52 S A -1.3276
53 K A -2.1210
54 S A -1.3738
55 T A -0.8954
56 A A 0.0000
57 T A 0.3844
58 I A 0.0000
59 S A -0.4538
60 G A -0.7155
61 L A 0.0000
62 S A -0.9177
63 P A -1.0162
64 G A -1.1755
65 V A -1.2001
66 D A -2.5177
67 Y A 0.0000
68 T A -1.0191
69 I A 0.0000
70 T A -0.1933
71 V A 0.0000
72 Y A 0.4164
73 A A 0.0000
74 N A 0.0000
75 P A -0.0184
76 Y A 0.4477
77 S A -0.6247
78 D A -1.3481
79 A A 0.3134
80 P A 0.9835
81 I A 2.1548
82 Y A 2.5537
83 Y A 2.2612
84 S A 1.3199
85 Y A 1.2269
86 H A 0.0352
87 S A -0.1596
88 P A 0.0474
89 I A 0.0737
90 S A -0.4571
91 I A -0.7516
92 N A -1.6736
93 Y A -1.5137
94 R A -2.5769
95 T A -1.0893
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Laboratory of Theory of Biopolymers 2018