| Chain sequence(s) |
A: GYCAEKGIKCHNIHCCSGLTCKCKGSSCVCRK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.2990 | |
| 2 | Y | A | 1.0178 | |
| 3 | C | A | 0.4915 | |
| 4 | A | A | 0.0000 | |
| 5 | E | A | -2.5168 | |
| 6 | K | A | -3.0392 | |
| 7 | G | A | -1.5943 | |
| 8 | I | A | -0.8411 | |
| 9 | K | A | -1.9852 | |
| 10 | C | A | 0.0000 | |
| 11 | H | A | -1.7802 | |
| 12 | N | A | -1.8747 | |
| 13 | I | A | -0.7971 | |
| 14 | H | A | -1.2346 | |
| 15 | C | A | 0.0000 | |
| 16 | C | A | -0.5920 | |
| 17 | S | A | -0.9896 | |
| 18 | G | A | -1.4701 | |
| 19 | L | A | -2.0388 | |
| 20 | T | A | -1.5670 | |
| 21 | C | A | -1.5286 | |
| 22 | K | A | -1.8456 | |
| 23 | C | A | -1.1862 | |
| 24 | K | A | -1.8828 | |
| 25 | G | A | -1.3792 | |
| 26 | S | A | -0.7943 | |
| 27 | S | A | -0.9260 | |
| 28 | C | A | -0.8280 | |
| 29 | V | A | -1.2989 | |
| 30 | C | A | 0.0000 | |
| 31 | R | A | -2.7006 | |
| 32 | K | A | -2.7108 |