Project name: 23.E1E1

Status: done

Started: 2026-07-07 08:40:24
Settings
Chain sequence(s) H: QVQLQQPGAELVKPGASVKLSCKASGYTFTTFWMHWVKQRPGRGLEWIGRIVPNSGETTYNEKFKSKATLTADKSSSTAYMRLSSLTSEDSAVYYCARPDYWGQGTTLTVSS
L: DIQMTQSPSSLSASLGERVSLTCRASQKINGFLSWLQQKPDGTIKRLINAAVILDSGVPKRFSGSRSGSDYSLTISSLESEDFADYYCLQYATYPWTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:35)
Show buried residues

Minimal score value
-3.4021
Maximal score value
2.7947
Average score
-0.6558
Total score value
-143.6189

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5049
2 V H -0.8835
3 Q H -1.7076
4 L H 0.0000
5 Q H -2.0622
6 Q H 0.0000
7 P H -0.9752
8 G H -0.9201
9 A H -0.2466
11 E H -0.3386
12 L H 0.8315
13 V H -0.2572
14 K H -1.6447
15 P H -1.3255
16 G H -1.0977
17 A H -0.8638
18 S H -1.3016
19 V H 0.0000
20 K H -2.4258
21 L H 0.0000
22 S H -1.0326
23 C H 0.0000
24 K H -1.7488
25 A H 0.0000
26 S H -1.2417
27 G H -1.0271
28 Y H -0.3172
29 T H -0.2499
30 F H 0.0000
35 T H -0.8278
36 T H 0.1049
37 F H 0.8102
38 W H 0.3017
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.9730
45 R H -1.6404
46 P H -1.2349
47 G H -1.6204
48 R H -2.5000
49 G H -1.4883
50 L H 0.0000
51 E H -0.9895
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 R H -0.1598
56 I H 0.0000
57 V H -0.6087
58 P H 0.0000
59 N H -1.9489
62 S H -1.4869
63 G H -1.8187
64 E H -1.8689
65 T H -0.7892
66 T H -0.5787
67 Y H -1.1189
68 N H -2.0613
69 E H -3.4021
70 K H -3.2029
71 F H 0.0000
72 K H -2.9808
74 S H -1.7781
75 K H -1.6434
76 A H 0.0000
77 T H -1.1513
78 L H 0.0000
79 T H -0.9606
80 A H -1.1025
81 D H -1.8539
82 K H -2.4700
83 S H -1.2908
84 S H -1.0700
85 S H -1.2327
86 T H 0.0000
87 A H 0.0000
88 Y H -0.8134
89 M H 0.0000
90 R H -2.2271
91 L H 0.0000
92 S H -1.0538
93 S H -0.7760
94 L H 0.0000
95 T H -1.2407
96 S H -1.4523
97 E H -2.0203
98 D H 0.0000
99 S H -0.6944
100 A H 0.0000
101 V H -0.1098
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 P H 0.1661
116 D H -0.1958
117 Y H 0.1978
118 W H -0.2843
119 G H 0.0000
120 Q H -1.2964
121 G H 0.0000
122 T H 0.0000
123 T H -0.1879
124 L H 0.0000
125 T H -0.1611
126 V H 0.0000
127 S H -0.6407
128 S H -0.7693
1 D L -2.2418
2 I L 0.0000
3 Q L -2.1719
4 M L 0.0000
5 T L -1.3273
6 Q L -1.0788
7 S L -0.7218
8 P L -0.5823
9 S L -0.8432
10 S L -1.1289
11 L L -0.5774
12 S L -0.7986
13 A L 0.0000
14 S L -0.5388
15 L L 0.0976
16 G L -1.0878
17 E L -1.7632
18 R L -2.2896
19 V L 0.0000
20 S L -0.5991
21 L L 0.0000
22 T L -0.9102
23 C L 0.0000
24 R L -2.9095
25 A L 0.0000
26 S L -2.2092
27 Q L -2.9216
28 K L -2.8981
29 I L 0.0000
36 N L -1.8336
37 G L -0.2486
38 F L 1.0134
39 L L 0.0000
40 S L 0.0000
41 W L 0.0000
42 L L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.5039
46 P L -1.3559
47 D L -2.1893
48 G L -1.4196
49 T L -1.1207
50 I L 0.0000
51 K L -0.9541
52 R L -0.6906
53 L L 0.0000
54 I L 0.0000
55 N L 1.1306
56 A L 1.2750
57 A L 0.0000
65 V L 2.5171
66 I L 2.7947
67 L L 1.0740
68 D L -0.0708
69 S L -0.2925
70 G L -0.8360
71 V L 0.0000
72 P L -1.1329
74 K L -1.9286
75 R L -1.5425
76 F L 0.0000
77 S L 0.0685
78 G L 0.5861
79 S L -0.2698
80 R L -1.8585
83 S L -1.4855
84 G L -1.6647
85 S L -2.2361
86 D L -2.0592
87 Y L 0.0000
88 S L -0.7582
89 L L 0.0000
90 T L -0.6396
91 I L 0.0000
92 S L -1.5564
93 S L -1.4590
94 L L 0.0000
95 E L -1.7498
96 S L -1.0276
97 E L -1.9409
98 D L 0.0000
99 F L -0.8213
100 A L 0.0000
101 D L -1.2516
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 L L 0.0000
106 Q L 0.0000
107 Y L 0.7980
108 A L 0.1589
109 T L 0.1303
114 Y L 0.5042
115 P L -0.3527
116 W L 0.0732
117 T L -0.4062
118 F L -0.2077
119 G L 0.0000
120 G L -1.2019
121 G L 0.0000
122 T L 0.0000
123 K L -1.9996
124 L L 0.0000
125 E L -1.3162
126 I L 0.6459
127 K L -0.9684
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Laboratory of Theory of Biopolymers 2018