| Chain sequence(s) |
H: QVQLQESGPGLVKPSDTLSLTCAVSGYSITGGYSWHWIRQPPGKGLEWMGYIHYSGYTDFNPSLKTRITISRDTSKNQFSLKLSSVTAVDTAVYYCARKDPSDAFPYWGQGTLVTVSS
L: EIVLTQSPDFQSVTPKEKVTITCRASQSISDHLHWYQQKPDQSPKLLIKYASHAISGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCQQGHSFPLTFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.4865 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.6756 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.7956 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.7427 | |
| 8 | G | H | -0.4959 | |
| 9 | P | H | -0.1871 | |
| 11 | G | H | 0.1224 | |
| 12 | L | H | 0.3628 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.4963 | |
| 15 | P | H | -1.2280 | |
| 16 | S | H | -1.1763 | |
| 17 | D | H | -1.5716 | |
| 18 | T | H | -1.1975 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.8838 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.7839 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -1.2069 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -1.2920 | |
| 27 | G | H | -1.0349 | |
| 28 | Y | H | -0.4215 | |
| 29 | S | H | -0.4163 | |
| 30 | I | H | 0.0000 | |
| 31 | T | H | -0.1462 | |
| 35 | G | H | -0.2906 | |
| 36 | G | H | 0.0279 | |
| 37 | Y | H | 0.2055 | |
| 38 | S | H | 0.0000 | |
| 39 | W | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6361 | |
| 45 | P | H | -0.4406 | |
| 46 | P | H | -0.7147 | |
| 47 | G | H | -1.4950 | |
| 48 | K | H | -2.2597 | |
| 49 | G | H | -1.4009 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7293 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | Y | H | 0.1782 | |
| 56 | I | H | 0.0000 | |
| 57 | H | H | 0.3053 | |
| 58 | Y | H | 0.5369 | |
| 59 | S | H | 0.2756 | |
| 63 | G | H | 0.3418 | |
| 64 | Y | H | 1.0896 | |
| 65 | T | H | 0.4013 | |
| 66 | D | H | -0.0753 | |
| 67 | F | H | -0.1777 | |
| 68 | N | H | -0.5665 | |
| 69 | P | H | -0.8135 | |
| 70 | S | H | -0.6762 | |
| 71 | L | H | 0.0000 | |
| 72 | K | H | -1.2439 | |
| 74 | T | H | -0.7809 | |
| 75 | R | H | -0.9923 | |
| 76 | I | H | 0.0000 | |
| 77 | T | H | -0.7689 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.6319 | |
| 80 | R | H | -1.2467 | |
| 81 | D | H | -1.7218 | |
| 82 | T | H | -1.3098 | |
| 83 | S | H | -1.4555 | |
| 84 | K | H | -2.3161 | |
| 85 | N | H | -1.5824 | |
| 86 | Q | H | -1.5613 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.7683 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.3741 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.9800 | |
| 93 | S | H | -0.9149 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | 0.0598 | |
| 96 | A | H | 0.6609 | |
| 97 | V | H | 1.7456 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.7623 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.2512 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | K | H | -0.3084 | |
| 108 | D | H | -0.4722 | |
| 109 | P | H | -0.4593 | |
| 110 | S | H | -0.4970 | |
| 113 | D | H | -0.6647 | |
| 114 | A | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | P | H | -0.2551 | |
| 117 | Y | H | -0.3234 | |
| 118 | W | H | -0.6721 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.9117 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.1082 | |
| 123 | L | H | 0.7421 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3817 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5906 | |
| 128 | S | H | -0.6134 | |
| 1 | E | L | -1.3825 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.6965 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.8333 | |
| 6 | Q | L | -0.8864 | |
| 7 | S | L | -0.9166 | |
| 8 | P | L | -0.6910 | |
| 9 | D | L | -1.4314 | |
| 10 | F | L | 0.2561 | |
| 11 | Q | L | -0.4095 | |
| 12 | S | L | -0.6838 | |
| 13 | V | L | -1.3327 | |
| 14 | T | L | -2.1396 | |
| 15 | P | L | -2.4796 | |
| 16 | K | L | -3.4036 | |
| 17 | E | L | -3.8255 | |
| 18 | K | L | -3.0433 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5599 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -1.0343 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3234 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.9827 | |
| 27 | Q | L | -1.6060 | |
| 28 | S | L | -1.5121 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -1.1807 | |
| 37 | D | L | -1.5192 | |
| 38 | H | L | -1.0880 | |
| 39 | L | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.7642 | |
| 46 | P | L | -1.6709 | |
| 47 | D | L | -2.6103 | |
| 48 | Q | L | -2.5107 | |
| 49 | S | L | -1.5157 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.3074 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | K | L | -0.7378 | |
| 56 | Y | L | -0.5077 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.8676 | |
| 66 | H | L | -0.9649 | |
| 67 | A | L | -0.3913 | |
| 68 | I | L | -0.0317 | |
| 69 | S | L | -0.2609 | |
| 70 | G | L | -0.3687 | |
| 71 | V | L | -0.1612 | |
| 72 | P | L | -0.2511 | |
| 74 | S | L | -0.4970 | |
| 75 | R | L | -1.1995 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.6081 | |
| 78 | G | L | -0.4953 | |
| 79 | S | L | -0.7735 | |
| 80 | G | L | -1.1417 | |
| 83 | S | L | -1.2894 | |
| 84 | G | L | -1.4209 | |
| 85 | T | L | -1.8289 | |
| 86 | D | L | -2.2224 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7250 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.4617 | |
| 93 | S | L | -2.8063 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -2.5999 | |
| 96 | A | L | -1.8620 | |
| 97 | E | L | -2.1643 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -1.2548 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8438 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.0000 | |
| 108 | H | L | -0.7574 | |
| 109 | S | L | -0.2855 | |
| 114 | F | L | 0.4554 | |
| 115 | P | L | 0.0000 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | -0.0202 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.2424 | |
| 121 | G | L | -1.1568 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.3160 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.2261 | |
| 126 | I | L | -1.6362 | |
| 127 | K | L | -1.9300 |