| Chain sequence(s) |
A: IVIVKGH
C: IVIVKGH B: IVIVKGH E: IVIVKGH D: IVIVKGH G: IVIVKGH F: IVIVKGH I: IVIVKGH H: IVIVKGH K: IVIVKGH J: IVIVKGH M: IVIVKGH L: IVIVKGH O: IVIVKGH N: IVIVKGH Q: IVIVKGH P: IVIVKGH S: IVIVKGH R: IVIVKGH T: IVIVKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:10)
[INFO] Main: Simulation completed successfully. (00:03:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 5.3550 | |
| 2 | V | A | 5.2169 | |
| 3 | I | A | 4.3635 | |
| 4 | V | A | 2.5820 | |
| 5 | K | A | -0.4259 | |
| 6 | G | A | -1.0496 | |
| 7 | H | A | -1.4223 | |
| 1 | I | B | 5.0064 | |
| 2 | V | B | 5.6835 | |
| 3 | I | B | 4.5099 | |
| 4 | V | B | 3.3221 | |
| 5 | K | B | -0.2789 | |
| 6 | G | B | -1.0555 | |
| 7 | H | B | -1.4442 | |
| 1 | I | C | 4.2775 | |
| 2 | V | C | 4.1743 | |
| 3 | I | C | 4.1021 | |
| 4 | V | C | 2.3643 | |
| 5 | K | C | -0.6124 | |
| 6 | G | C | -0.9889 | |
| 7 | H | C | -1.4220 | |
| 1 | I | D | 3.4337 | |
| 2 | V | D | 3.4714 | |
| 3 | I | D | 2.4357 | |
| 4 | V | D | 2.0981 | |
| 5 | K | D | -0.1557 | |
| 6 | G | D | -1.3114 | |
| 7 | H | D | -2.1937 | |
| 1 | I | E | 3.4175 | |
| 2 | V | E | 2.5425 | |
| 3 | I | E | 1.9589 | |
| 4 | V | E | 0.6168 | |
| 5 | K | E | -1.8628 | |
| 6 | G | E | -1.5033 | |
| 7 | H | E | -1.7507 | |
| 1 | I | F | 3.3574 | |
| 2 | V | F | 2.9466 | |
| 3 | I | F | 2.1215 | |
| 4 | V | F | 1.1117 | |
| 5 | K | F | -1.4563 | |
| 6 | G | F | -1.7998 | |
| 7 | H | F | -1.8886 | |
| 1 | I | G | 3.3154 | |
| 2 | V | G | 3.4903 | |
| 3 | I | G | 2.9613 | |
| 4 | V | G | 2.1839 | |
| 5 | K | G | -1.0697 | |
| 6 | G | G | -1.3071 | |
| 7 | H | G | -1.4265 | |
| 1 | I | H | 3.4310 | |
| 2 | V | H | 3.8629 | |
| 3 | I | H | 3.9283 | |
| 4 | V | H | 2.4369 | |
| 5 | K | H | -0.7003 | |
| 6 | G | H | -1.0028 | |
| 7 | H | H | -1.4304 | |
| 1 | I | I | 4.0296 | |
| 2 | V | I | 3.7009 | |
| 3 | I | I | 3.7040 | |
| 4 | V | I | 2.6683 | |
| 5 | K | I | -0.7482 | |
| 6 | G | I | -1.0281 | |
| 7 | H | I | -1.4257 | |
| 1 | I | J | 3.5137 | |
| 2 | V | J | 3.7760 | |
| 3 | I | J | 3.4765 | |
| 4 | V | J | 2.6395 | |
| 5 | K | J | -0.4846 | |
| 6 | G | J | -1.1341 | |
| 7 | H | J | -1.4233 | |
| 1 | I | K | 3.5644 | |
| 2 | V | K | 3.6434 | |
| 3 | I | K | 2.3020 | |
| 4 | V | K | 1.8273 | |
| 5 | K | K | -1.2997 | |
| 6 | G | K | -1.4824 | |
| 7 | H | K | -1.6024 | |
| 1 | I | L | 3.5487 | |
| 2 | V | L | 0.0000 | |
| 3 | I | L | 2.2299 | |
| 4 | V | L | 0.8465 | |
| 5 | K | L | -1.8125 | |
| 6 | G | L | -1.8501 | |
| 7 | H | L | -1.9744 | |
| 1 | I | M | 3.6686 | |
| 2 | V | M | 0.0000 | |
| 3 | I | M | 2.1461 | |
| 4 | V | M | 0.7953 | |
| 5 | K | M | -1.9848 | |
| 6 | G | M | -1.9970 | |
| 7 | H | M | -1.8243 | |
| 1 | I | N | 0.0000 | |
| 2 | V | N | 3.2220 | |
| 3 | I | N | 1.7680 | |
| 4 | V | N | 1.2350 | |
| 5 | K | N | -1.3828 | |
| 6 | G | N | -1.8541 | |
| 7 | H | N | -1.9995 | |
| 1 | I | O | 0.0000 | |
| 2 | V | O | 2.5740 | |
| 3 | I | O | 1.8692 | |
| 4 | V | O | 0.8174 | |
| 5 | K | O | -1.6373 | |
| 6 | G | O | -1.3820 | |
| 7 | H | O | -1.6502 | |
| 1 | I | P | 3.4758 | |
| 2 | V | P | 0.0000 | |
| 3 | I | P | 2.2244 | |
| 4 | V | P | 0.7667 | |
| 5 | K | P | -1.4520 | |
| 6 | G | P | -1.7148 | |
| 7 | H | P | -1.9541 | |
| 1 | I | Q | 3.2538 | |
| 2 | V | Q | 3.3332 | |
| 3 | I | Q | 1.7614 | |
| 4 | V | Q | 1.0746 | |
| 5 | K | Q | -1.9801 | |
| 6 | G | Q | -1.6850 | |
| 7 | H | Q | -1.8259 | |
| 1 | I | R | 5.1659 | |
| 2 | V | R | 5.4931 | |
| 3 | I | R | 4.9957 | |
| 4 | V | R | 3.3238 | |
| 5 | K | R | -0.8667 | |
| 6 | G | R | -1.4565 | |
| 7 | H | R | -1.6720 | |
| 1 | I | S | 5.3634 | |
| 2 | V | S | 5.4933 | |
| 3 | I | S | 4.4810 | |
| 4 | V | S | 2.7321 | |
| 5 | K | S | -1.6730 | |
| 6 | G | S | -1.6660 | |
| 7 | H | S | -1.8620 | |
| 1 | I | T | 4.7564 | |
| 2 | V | T | 4.3830 | |
| 3 | I | T | 3.7767 | |
| 4 | V | T | 2.1407 | |
| 5 | K | T | -0.9134 | |
| 6 | G | T | -1.1443 | |
| 7 | H | T | -1.4039 |