Project name: IVIVKGH20

Status: done

Started: 2026-02-13 09:51:35
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Chain sequence(s) A: IVIVKGH
C: IVIVKGH
B: IVIVKGH
E: IVIVKGH
D: IVIVKGH
G: IVIVKGH
F: IVIVKGH
I: IVIVKGH
H: IVIVKGH
K: IVIVKGH
J: IVIVKGH
M: IVIVKGH
L: IVIVKGH
O: IVIVKGH
N: IVIVKGH
Q: IVIVKGH
P: IVIVKGH
S: IVIVKGH
R: IVIVKGH
T: IVIVKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:15)
Show buried residues

Minimal score value
-2.1937
Maximal score value
5.6835
Average score
1.0917
Total score value
152.8346

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 5.3550
2 V A 5.2169
3 I A 4.3635
4 V A 2.5820
5 K A -0.4259
6 G A -1.0496
7 H A -1.4223
1 I B 5.0064
2 V B 5.6835
3 I B 4.5099
4 V B 3.3221
5 K B -0.2789
6 G B -1.0555
7 H B -1.4442
1 I C 4.2775
2 V C 4.1743
3 I C 4.1021
4 V C 2.3643
5 K C -0.6124
6 G C -0.9889
7 H C -1.4220
1 I D 3.4337
2 V D 3.4714
3 I D 2.4357
4 V D 2.0981
5 K D -0.1557
6 G D -1.3114
7 H D -2.1937
1 I E 3.4175
2 V E 2.5425
3 I E 1.9589
4 V E 0.6168
5 K E -1.8628
6 G E -1.5033
7 H E -1.7507
1 I F 3.3574
2 V F 2.9466
3 I F 2.1215
4 V F 1.1117
5 K F -1.4563
6 G F -1.7998
7 H F -1.8886
1 I G 3.3154
2 V G 3.4903
3 I G 2.9613
4 V G 2.1839
5 K G -1.0697
6 G G -1.3071
7 H G -1.4265
1 I H 3.4310
2 V H 3.8629
3 I H 3.9283
4 V H 2.4369
5 K H -0.7003
6 G H -1.0028
7 H H -1.4304
1 I I 4.0296
2 V I 3.7009
3 I I 3.7040
4 V I 2.6683
5 K I -0.7482
6 G I -1.0281
7 H I -1.4257
1 I J 3.5137
2 V J 3.7760
3 I J 3.4765
4 V J 2.6395
5 K J -0.4846
6 G J -1.1341
7 H J -1.4233
1 I K 3.5644
2 V K 3.6434
3 I K 2.3020
4 V K 1.8273
5 K K -1.2997
6 G K -1.4824
7 H K -1.6024
1 I L 3.5487
2 V L 0.0000
3 I L 2.2299
4 V L 0.8465
5 K L -1.8125
6 G L -1.8501
7 H L -1.9744
1 I M 3.6686
2 V M 0.0000
3 I M 2.1461
4 V M 0.7953
5 K M -1.9848
6 G M -1.9970
7 H M -1.8243
1 I N 0.0000
2 V N 3.2220
3 I N 1.7680
4 V N 1.2350
5 K N -1.3828
6 G N -1.8541
7 H N -1.9995
1 I O 0.0000
2 V O 2.5740
3 I O 1.8692
4 V O 0.8174
5 K O -1.6373
6 G O -1.3820
7 H O -1.6502
1 I P 3.4758
2 V P 0.0000
3 I P 2.2244
4 V P 0.7667
5 K P -1.4520
6 G P -1.7148
7 H P -1.9541
1 I Q 3.2538
2 V Q 3.3332
3 I Q 1.7614
4 V Q 1.0746
5 K Q -1.9801
6 G Q -1.6850
7 H Q -1.8259
1 I R 5.1659
2 V R 5.4931
3 I R 4.9957
4 V R 3.3238
5 K R -0.8667
6 G R -1.4565
7 H R -1.6720
1 I S 5.3634
2 V S 5.4933
3 I S 4.4810
4 V S 2.7321
5 K S -1.6730
6 G S -1.6660
7 H S -1.8620
1 I T 4.7564
2 V T 4.3830
3 I T 3.7767
4 V T 2.1407
5 K T -0.9134
6 G T -1.1443
7 H T -1.4039
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Laboratory of Theory of Biopolymers 2018