| Chain sequence(s) |
B: GPVETVSVSMSTDELLALGPSLRLAFGFGENLEEAVAEAQKQPPHLIVIA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:22)
[INFO] Main: Simulation completed successfully. (00:00:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | B | -0.3562 | |
| 2 | P | B | -0.0926 | |
| 3 | V | B | 0.6468 | |
| 4 | E | B | -0.7450 | |
| 5 | T | B | 0.2193 | |
| 6 | V | B | 1.6490 | |
| 7 | S | B | 1.3309 | |
| 8 | V | B | 2.0483 | |
| 9 | S | B | 0.8150 | |
| 10 | M | B | 0.2414 | |
| 11 | S | B | -0.9111 | |
| 12 | T | B | -0.4917 | |
| 13 | D | B | -1.8345 | |
| 14 | E | B | -1.7600 | |
| 15 | L | B | 0.0000 | |
| 16 | L | B | 1.0679 | |
| 17 | A | B | 0.3826 | |
| 18 | L | B | 1.3112 | |
| 19 | G | B | 0.8257 | |
| 20 | P | B | 0.6289 | |
| 21 | S | B | 0.4902 | |
| 22 | L | B | 0.4360 | |
| 23 | R | B | -1.2154 | |
| 24 | L | B | -0.6013 | |
| 25 | A | B | -0.8287 | |
| 26 | F | B | 0.7802 | |
| 27 | G | B | 0.5581 | |
| 28 | F | B | 1.2310 | |
| 29 | G | B | -0.9521 | |
| 30 | E | B | -2.2408 | |
| 31 | N | B | -1.3907 | |
| 32 | L | B | 0.0859 | |
| 33 | E | B | -1.5765 | |
| 34 | E | B | -1.9267 | |
| 35 | A | B | -0.2771 | |
| 36 | V | B | 0.5384 | |
| 37 | A | B | -0.9184 | |
| 38 | E | B | -1.4219 | |
| 39 | A | B | -1.0016 | |
| 40 | Q | B | -2.1982 | |
| 41 | K | B | -2.7459 | |
| 42 | Q | B | -2.1636 | |
| 43 | P | B | -1.4721 | |
| 44 | P | B | -1.3210 | |
| 45 | H | B | -0.5373 | |
| 46 | L | B | 1.0673 | |
| 47 | I | B | 1.5167 | |
| 48 | V | B | 2.3379 | |
| 49 | I | B | 1.5566 | |
| 50 | A | B | 0.8588 |