| Chain sequence(s) |
B: MANLMEAKKLLKENKSKLKAAKTPEEVLELWKEAVKTAKRIGELIAAALA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:13)
[INFO] Main: Simulation completed successfully. (00:02:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | B | 1.2877 | |
| 2 | A | B | 0.3339 | |
| 3 | N | B | -0.3543 | |
| 4 | L | B | 0.1535 | |
| 5 | M | B | -0.0661 | |
| 6 | E | B | -1.5989 | |
| 7 | A | B | 0.0000 | |
| 8 | K | B | -2.5268 | |
| 9 | K | B | -2.8671 | |
| 10 | L | B | -2.0539 | |
| 11 | L | B | -1.6765 | |
| 12 | K | B | -3.4381 | |
| 13 | E | B | -3.2014 | |
| 14 | N | B | 0.0000 | |
| 15 | K | B | -2.7574 | |
| 16 | S | B | -2.4895 | |
| 17 | K | B | -2.5329 | |
| 18 | L | B | -1.8845 | |
| 19 | K | B | -2.3190 | |
| 20 | A | B | -1.6712 | |
| 21 | A | B | -1.9906 | |
| 22 | K | B | -2.3794 | |
| 23 | T | B | -1.7173 | |
| 24 | P | B | -1.4515 | |
| 25 | E | B | -2.3430 | |
| 26 | E | B | -2.0537 | |
| 27 | V | B | -0.7192 | |
| 28 | L | B | -0.3538 | |
| 29 | E | B | -1.8998 | |
| 30 | L | B | -0.9240 | |
| 31 | W | B | 0.2212 | |
| 32 | K | B | -1.0051 | |
| 33 | E | B | -1.5001 | |
| 34 | A | B | -0.9379 | |
| 35 | V | B | -0.7526 | |
| 36 | K | B | -2.5277 | |
| 37 | T | B | 0.0000 | |
| 38 | A | B | -1.8077 | |
| 39 | K | B | -3.3597 | |
| 40 | R | B | -3.5207 | |
| 41 | I | B | -2.0039 | |
| 42 | G | B | -2.0246 | |
| 43 | E | B | -2.3875 | |
| 44 | L | B | -0.6716 | |
| 45 | I | B | 0.4621 | |
| 46 | A | B | 0.2458 | |
| 47 | A | B | 0.4411 | |
| 48 | A | B | 1.1340 | |
| 49 | L | B | 1.6806 | |
| 50 | A | B | 0.9850 |