| Chain sequence(s) |
A: AQVQLQESGGGLVQPGGSLRLSCAASGFTFSSYGMSWVRQAPGKGLEWVSAINSNGGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCASGDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:09)
[INFO] Main: Simulation completed successfully. (00:01:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.6892 | |
| 2 | Q | A | -1.4307 | |
| 3 | V | A | -0.7547 | |
| 4 | Q | A | -1.5903 | |
| 5 | L | A | 0.0000 | |
| 6 | Q | A | -1.7306 | |
| 7 | E | A | 0.0000 | |
| 8 | S | A | -1.1547 | |
| 9 | G | A | -1.0465 | |
| 10 | G | A | -0.7215 | |
| 11 | G | A | -0.0015 | |
| 12 | L | A | 0.9961 | |
| 13 | V | A | -0.0411 | |
| 14 | Q | A | -1.3225 | |
| 15 | P | A | -1.5225 | |
| 16 | G | A | -1.3476 | |
| 17 | G | A | -0.8743 | |
| 18 | S | A | -0.9796 | |
| 19 | L | A | -0.7262 | |
| 20 | R | A | -1.7744 | |
| 21 | L | A | 0.0000 | |
| 22 | S | A | -0.7766 | |
| 23 | C | A | 0.0000 | |
| 24 | A | A | -1.0950 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -0.9672 | |
| 27 | G | A | -0.8393 | |
| 28 | F | A | -0.1705 | |
| 29 | T | A | 0.0291 | |
| 30 | F | A | 0.0000 | |
| 31 | S | A | -0.8590 | |
| 32 | S | A | -0.1262 | |
| 33 | Y | A | 0.5285 | |
| 34 | G | A | -0.4245 | |
| 35 | M | A | 0.0000 | |
| 36 | S | A | 0.2512 | |
| 37 | W | A | 0.0000 | |
| 38 | V | A | 0.0000 | |
| 39 | R | A | 0.0000 | |
| 40 | Q | A | -0.6926 | |
| 41 | A | A | -1.2558 | |
| 42 | P | A | -0.9803 | |
| 43 | G | A | -1.4247 | |
| 44 | K | A | -2.1024 | |
| 45 | G | A | -0.9286 | |
| 46 | L | A | 0.5195 | |
| 47 | E | A | -0.1913 | |
| 48 | W | A | 0.5229 | |
| 49 | V | A | 0.0000 | |
| 50 | S | A | 0.0000 | |
| 51 | A | A | 0.2289 | |
| 52 | I | A | 0.0000 | |
| 53 | N | A | -1.1682 | |
| 54 | S | A | -1.0352 | |
| 55 | N | A | -1.8964 | |
| 56 | G | A | -1.6231 | |
| 57 | G | A | -1.2313 | |
| 58 | S | A | -0.6551 | |
| 59 | T | A | 0.1242 | |
| 60 | Y | A | 0.6079 | |
| 61 | Y | A | -0.2959 | |
| 62 | A | A | -1.0738 | |
| 63 | D | A | -2.3481 | |
| 64 | S | A | -1.8026 | |
| 65 | V | A | 0.0000 | |
| 66 | K | A | -2.4551 | |
| 67 | G | A | -1.7630 | |
| 68 | R | A | -1.3491 | |
| 69 | F | A | 0.0000 | |
| 70 | T | A | -0.7074 | |
| 71 | I | A | 0.0000 | |
| 72 | S | A | -0.7382 | |
| 73 | R | A | -1.3793 | |
| 74 | D | A | -1.7425 | |
| 75 | N | A | -1.8614 | |
| 76 | A | A | -1.3680 | |
| 77 | K | A | -2.2706 | |
| 78 | N | A | -1.6492 | |
| 79 | T | A | 0.0000 | |
| 80 | V | A | 0.0000 | |
| 81 | Y | A | -0.5624 | |
| 82 | L | A | 0.0000 | |
| 83 | Q | A | -1.2223 | |
| 84 | M | A | 0.0000 | |
| 85 | N | A | -1.3049 | |
| 86 | S | A | -1.1753 | |
| 87 | L | A | 0.0000 | |
| 88 | K | A | -2.1868 | |
| 89 | P | A | -1.9332 | |
| 90 | E | A | -2.3244 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -0.9422 | |
| 93 | A | A | 0.0000 | |
| 94 | V | A | -0.3081 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | -0.0868 | |
| 97 | C | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | S | A | 0.0000 | |
| 100 | G | A | -0.7906 | |
| 101 | D | A | -1.3973 | |
| 102 | Y | A | 0.0782 | |
| 103 | W | A | -0.0101 | |
| 104 | G | A | -0.7102 | |
| 105 | Q | A | -1.4472 | |
| 106 | G | A | -0.9967 | |
| 107 | T | A | -1.0991 | |
| 108 | Q | A | -1.0379 | |
| 109 | V | A | 0.0000 | |
| 110 | T | A | -0.3603 | |
| 111 | V | A | 0.0000 | |
| 112 | S | A | -0.7988 | |
| 113 | S | A | -0.5055 |