| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWAKRPGAFDSFLIQYQESEKVGEAIVLTVPGSCRSYDLTGLKPGTEYTVSIYGVDVKYDIDSRPISSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.8000 | |
| 2 | P | A | -0.4637 | |
| 3 | A | A | -0.8457 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.4324 | |
| 6 | N | A | -1.5910 | |
| 7 | L | A | -0.3937 | |
| 8 | V | A | 1.1574 | |
| 9 | V | A | 0.6677 | |
| 10 | S | A | -0.5930 | |
| 11 | R | A | -1.9992 | |
| 12 | V | A | -1.0184 | |
| 13 | T | A | -1.7911 | |
| 14 | E | A | -3.0596 | |
| 15 | D | A | -2.7725 | |
| 16 | S | A | -2.0910 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.2158 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.6558 | |
| 21 | W | A | 0.0000 | |
| 22 | A | A | -1.8236 | |
| 23 | K | A | -2.3486 | |
| 24 | R | A | -2.4848 | |
| 25 | P | A | -1.4760 | |
| 26 | G | A | -1.5326 | |
| 27 | A | A | -1.2486 | |
| 28 | F | A | 0.0000 | |
| 29 | D | A | -1.7413 | |
| 30 | S | A | -0.6539 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | 0.7079 | |
| 33 | I | A | 0.0000 | |
| 34 | Q | A | 0.4399 | |
| 35 | Y | A | 0.3281 | |
| 36 | Q | A | -0.8842 | |
| 37 | E | A | -1.8247 | |
| 38 | S | A | -1.5569 | |
| 39 | E | A | -2.5450 | |
| 40 | K | A | -1.7945 | |
| 41 | V | A | 0.1160 | |
| 42 | G | A | -0.9204 | |
| 43 | E | A | -1.7928 | |
| 44 | A | A | -0.3691 | |
| 45 | I | A | 0.7429 | |
| 46 | V | A | 1.4893 | |
| 47 | L | A | 1.1663 | |
| 48 | T | A | 0.4624 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -0.8883 | |
| 51 | G | A | 0.0000 | |
| 52 | S | A | -1.1378 | |
| 53 | C | A | -1.1068 | |
| 54 | R | A | -1.8869 | |
| 55 | S | A | -1.0705 | |
| 56 | Y | A | -0.9124 | |
| 57 | D | A | -1.6943 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.3724 | |
| 60 | G | A | -1.5159 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -3.0644 | |
| 63 | P | A | -2.6393 | |
| 64 | G | A | -1.9305 | |
| 65 | T | A | -2.3792 | |
| 66 | E | A | -2.1715 | |
| 67 | Y | A | 0.0000 | |
| 68 | T | A | -0.0460 | |
| 69 | V | A | 0.0000 | |
| 70 | S | A | 0.2183 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | 0.0924 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | -0.0594 | |
| 75 | D | A | -0.6062 | |
| 76 | V | A | 0.1821 | |
| 77 | K | A | -1.0837 | |
| 78 | Y | A | -0.7448 | |
| 79 | D | A | -1.5733 | |
| 80 | I | A | 0.1308 | |
| 81 | D | A | -1.7673 | |
| 82 | S | A | -1.4560 | |
| 83 | R | A | -2.2878 | |
| 84 | P | A | -1.0871 | |
| 85 | I | A | -0.1947 | |
| 86 | S | A | -0.2166 | |
| 87 | S | A | 0.0000 | |
| 88 | N | A | -1.0827 | |
| 89 | P | A | -0.8616 | |
| 90 | L | A | -0.7125 | |
| 91 | S | A | 0.0653 | |
| 92 | A | A | 1.1843 | |
| 93 | I | A | 1.7523 | |
| 94 | F | A | 0.0000 | |
| 95 | T | A | -0.9226 | |
| 96 | T | A | -2.0020 |