| Chain sequence(s) |
A: QVQLVESGGGLVQAGGSLRLSCAASGFPVWTAYMEWYRQAPGKEREWVAAIESWGWWTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVEVGDHYYGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:16)
[INFO] Main: Simulation completed successfully. (00:01:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.3711 | |
| 2 | V | A | -0.7119 | |
| 3 | Q | A | -1.0992 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.5103 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.6974 | |
| 8 | G | A | -1.0173 | |
| 9 | G | A | -0.8306 | |
| 10 | G | A | -0.0715 | |
| 11 | L | A | 1.0113 | |
| 12 | V | A | -0.0117 | |
| 13 | Q | A | -1.2101 | |
| 14 | A | A | -1.4188 | |
| 15 | G | A | -1.3429 | |
| 16 | G | A | -0.8859 | |
| 17 | S | A | -1.2197 | |
| 18 | L | A | -1.0321 | |
| 19 | R | A | -2.1366 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4907 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.2902 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.6480 | |
| 26 | G | A | -0.9009 | |
| 27 | F | A | -0.1420 | |
| 28 | P | A | -0.4008 | |
| 29 | V | A | 0.0000 | |
| 30 | W | A | 0.4726 | |
| 31 | T | A | 0.5108 | |
| 32 | A | A | 0.0000 | |
| 33 | Y | A | 0.0491 | |
| 34 | M | A | 0.0000 | |
| 35 | E | A | -0.1366 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.2317 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -2.1684 | |
| 40 | A | A | -2.0967 | |
| 41 | P | A | -1.4732 | |
| 42 | G | A | -2.0045 | |
| 43 | K | A | -3.4301 | |
| 44 | E | A | -3.7113 | |
| 45 | R | A | -3.0308 | |
| 46 | E | A | -1.8578 | |
| 47 | W | A | -0.6255 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | E | A | 0.6137 | |
| 53 | S | A | 0.9177 | |
| 54 | W | A | 1.5592 | |
| 55 | G | A | 1.0257 | |
| 56 | W | A | 1.8734 | |
| 57 | W | A | 1.8723 | |
| 58 | T | A | 0.9758 | |
| 59 | Y | A | 0.4506 | |
| 60 | Y | A | -0.5481 | |
| 61 | A | A | -1.1809 | |
| 62 | D | A | -2.3313 | |
| 63 | S | A | -1.7359 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.5212 | |
| 66 | G | A | -1.7842 | |
| 67 | R | A | -1.4883 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.7800 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.5773 | |
| 72 | R | A | -1.0246 | |
| 73 | D | A | -1.8526 | |
| 74 | N | A | -1.9894 | |
| 75 | A | A | -1.6327 | |
| 76 | K | A | -2.4451 | |
| 77 | N | A | -1.6687 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.7009 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.2389 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.4754 | |
| 85 | S | A | -1.2438 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.3356 | |
| 88 | P | A | -1.9519 | |
| 89 | E | A | -2.3558 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.9826 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.6729 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.2219 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | V | A | 0.0000 | |
| 99 | E | A | -2.2129 | |
| 100 | V | A | -0.8725 | |
| 101 | G | A | -1.5754 | |
| 102 | D | A | -2.5021 | |
| 103 | H | A | -2.0253 | |
| 104 | Y | A | -0.8954 | |
| 105 | Y | A | -0.2969 | |
| 106 | G | A | -0.1960 | |
| 107 | Q | A | -1.0783 | |
| 108 | G | A | -0.5898 | |
| 109 | T | A | 0.0000 | |
| 110 | Q | A | -1.1930 | |
| 111 | V | A | 0.0000 | |
| 112 | T | A | -0.3272 | |
| 113 | V | A | 0.0000 | |
| 114 | S | A | -0.7541 |