| Chain sequence(s) |
B: LAEVRAFVDGVLKAMEVMAEMAKQNGNEELLKKIEEKKEEFAKKGKEILA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:50)
[INFO] Main: Simulation completed successfully. (00:01:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.1865 | |
| 2 | A | B | -0.3087 | |
| 3 | E | B | -1.3894 | |
| 4 | V | B | -0.2383 | |
| 5 | R | B | -1.6346 | |
| 6 | A | B | -0.9307 | |
| 7 | F | B | 0.2028 | |
| 8 | V | B | 0.0000 | |
| 9 | D | B | -2.1936 | |
| 10 | G | B | -1.3447 | |
| 11 | V | B | -0.5538 | |
| 12 | L | B | -1.8062 | |
| 13 | K | B | -2.1528 | |
| 14 | A | B | -1.1491 | |
| 15 | M | B | 0.0000 | |
| 16 | E | B | -2.2212 | |
| 17 | V | B | -0.2739 | |
| 18 | M | B | -0.5391 | |
| 19 | A | B | 0.0000 | |
| 20 | E | B | -2.5254 | |
| 21 | M | B | -1.4785 | |
| 22 | A | B | 0.0000 | |
| 23 | K | B | -3.9128 | |
| 24 | Q | B | -3.2976 | |
| 25 | N | B | -3.1240 | |
| 26 | G | B | -3.1080 | |
| 27 | N | B | -3.2534 | |
| 28 | E | B | -4.1802 | |
| 29 | E | B | -3.6802 | |
| 30 | L | B | -2.8349 | |
| 31 | L | B | -4.1060 | |
| 32 | K | B | -4.6937 | |
| 33 | K | B | -4.2057 | |
| 34 | I | B | 0.0000 | |
| 35 | E | B | -4.9492 | |
| 36 | E | B | -5.2411 | |
| 37 | K | B | -4.7831 | |
| 38 | K | B | -4.5401 | |
| 39 | E | B | -4.6184 | |
| 40 | E | B | -4.4281 | |
| 41 | F | B | -2.9057 | |
| 42 | A | B | -2.8889 | |
| 43 | K | B | -3.9093 | |
| 44 | K | B | -2.8844 | |
| 45 | G | B | 0.0000 | |
| 46 | K | B | -3.0124 | |
| 47 | E | B | -2.3557 | |
| 48 | I | B | -0.0210 | |
| 49 | L | B | -0.1784 | |
| 50 | A | B | -0.2992 |