| Chain sequence(s) |
L: CTYEDFYFFGRLDFC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | C | L | 0.7810 | |
| 1 | T | L | -0.0879 | |
| 2 | Y | L | 1.2095 | |
| 3 | E | L | -0.2964 | |
| 4 | D | L | -1.3348 | |
| 5 | F | L | 2.1447 | |
| 6 | Y | L | 2.1788 | |
| 7 | F | L | 2.5403 | |
| 8 | F | L | 2.2756 | |
| 9 | G | L | -0.0584 | |
| 10 | R | L | -1.5843 | |
| 11 | L | L | 0.8704 | |
| 12 | D | L | -1.1634 | |
| 13 | F | L | 1.7336 | |
| 14 | C | L | 1.0351 |