Chain sequence(s) |
A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40) [INFO] Main: Simulation completed successfully. (00:00:40) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
5 | S | A | -1.4776 | |
6 | A | A | -1.2123 | |
7 | V | A | 0.0000 | |
8 | K | A | -1.1450 | |
9 | A | A | 0.0000 | |
10 | L | A | -0.4452 | |
11 | F | A | -0.3687 | |
12 | D | A | -2.1085 | |
13 | Y | A | 0.0000 | |
14 | K | A | -2.5356 | |
15 | A | A | -2.3979 | |
16 | Q | A | -3.0188 | |
17 | R | A | -3.6656 | |
18 | E | A | -3.1672 | |
19 | D | A | -2.3747 | |
20 | E | A | 0.0000 | |
21 | L | A | 0.0000 | |
22 | T | A | -1.2411 | |
23 | F | A | 0.0000 | |
24 | T | A | -1.5042 | |
25 | K | A | -1.6718 | |
26 | S | A | -0.8851 | |
27 | A | A | 0.0000 | |
28 | I | A | 0.4250 | |
29 | I | A | 0.0000 | |
30 | Q | A | -1.5670 | |
31 | N | A | -2.3271 | |
32 | V | A | -2.2661 | |
33 | E | A | -3.1025 | |
34 | K | A | -3.3319 | |
35 | Q | A | -3.2584 | |
36 | D | A | -2.8595 | |
37 | G | A | -1.7949 | |
38 | G | A | -1.3754 | |
39 | W | A | -1.0916 | |
40 | W | A | -1.7473 | |
41 | R | A | -2.0039 | |
42 | G | A | 0.0000 | |
43 | D | A | -1.7907 | |
44 | Y | A | -0.7979 | |
45 | G | A | -0.8675 | |
46 | G | A | -1.3489 | |
47 | K | A | -1.8406 | |
48 | K | A | -2.6204 | |
49 | Q | A | -1.9610 | |
50 | L | A | -1.1578 | |
51 | W | A | -0.8657 | |
52 | F | A | 0.0000 | |
53 | P | A | 0.0000 | |
54 | S | A | -1.2467 | |
55 | N | A | -1.0872 | |
56 | Y | A | -0.6337 | |
57 | V | A | 0.0000 | |
58 | E | A | -2.2565 | |
59 | E | A | -2.4595 |