| Chain sequence(s) |
A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40)
[INFO] Main: Simulation completed successfully. (00:00:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 5 | S | A | -1.4776 | |
| 6 | A | A | -1.2123 | |
| 7 | V | A | 0.0000 | |
| 8 | K | A | -1.1450 | |
| 9 | A | A | 0.0000 | |
| 10 | L | A | -0.4452 | |
| 11 | F | A | -0.3687 | |
| 12 | D | A | -2.1085 | |
| 13 | Y | A | 0.0000 | |
| 14 | K | A | -2.5356 | |
| 15 | A | A | -2.3979 | |
| 16 | Q | A | -3.0188 | |
| 17 | R | A | -3.6656 | |
| 18 | E | A | -3.1672 | |
| 19 | D | A | -2.3747 | |
| 20 | E | A | 0.0000 | |
| 21 | L | A | 0.0000 | |
| 22 | T | A | -1.2411 | |
| 23 | F | A | 0.0000 | |
| 24 | T | A | -1.5042 | |
| 25 | K | A | -1.6718 | |
| 26 | S | A | -0.8851 | |
| 27 | A | A | 0.0000 | |
| 28 | I | A | 0.4250 | |
| 29 | I | A | 0.0000 | |
| 30 | Q | A | -1.5670 | |
| 31 | N | A | -2.3271 | |
| 32 | V | A | -2.2661 | |
| 33 | E | A | -3.1025 | |
| 34 | K | A | -3.3319 | |
| 35 | Q | A | -3.2584 | |
| 36 | D | A | -2.8595 | |
| 37 | G | A | -1.7949 | |
| 38 | G | A | -1.3754 | |
| 39 | W | A | -1.0916 | |
| 40 | W | A | -1.7473 | |
| 41 | R | A | -2.0039 | |
| 42 | G | A | 0.0000 | |
| 43 | D | A | -1.7907 | |
| 44 | Y | A | -0.7979 | |
| 45 | G | A | -0.8675 | |
| 46 | G | A | -1.3489 | |
| 47 | K | A | -1.8406 | |
| 48 | K | A | -2.6204 | |
| 49 | Q | A | -1.9610 | |
| 50 | L | A | -1.1578 | |
| 51 | W | A | -0.8657 | |
| 52 | F | A | 0.0000 | |
| 53 | P | A | 0.0000 | |
| 54 | S | A | -1.2467 | |
| 55 | N | A | -1.0872 | |
| 56 | Y | A | -0.6337 | |
| 57 | V | A | 0.0000 | |
| 58 | E | A | -2.2565 | |
| 59 | E | A | -2.4595 |