| Chain sequence(s) |
H: DVQLQASGGGLVQPGGSLRVSCAASGYTFSSNVISWVRQAPGKGLEWMGGVIPIVDIANYAQRFKGRFTISRDEAKNTLYLQMNSLKSEDTAVYYCASTLGLVLDAMDRWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | H | -2.2607 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -2.1313 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.4795 | |
| 6 | A | H | 0.0000 | |
| 7 | S | H | -1.1341 | |
| 8 | G | H | -1.2026 | |
| 9 | G | H | -0.7624 | |
| 11 | G | H | 0.1990 | |
| 12 | L | H | 1.0905 | |
| 13 | V | H | 0.0289 | |
| 14 | Q | H | -1.3304 | |
| 15 | P | H | -1.5399 | |
| 16 | G | H | -1.3548 | |
| 17 | G | H | -1.0464 | |
| 18 | S | H | -1.1137 | |
| 19 | L | H | -0.8745 | |
| 20 | R | H | -2.1052 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.8556 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.9771 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.2559 | |
| 27 | G | H | -1.3440 | |
| 28 | Y | H | -0.7026 | |
| 29 | T | H | -0.2337 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.1307 | |
| 36 | S | H | 0.5242 | |
| 37 | N | H | 0.0000 | |
| 38 | V | H | 1.3839 | |
| 39 | I | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.4160 | |
| 45 | A | H | -1.0386 | |
| 46 | P | H | -0.8770 | |
| 47 | G | H | -1.2918 | |
| 48 | K | H | -1.7795 | |
| 49 | G | H | -0.7049 | |
| 50 | L | H | 0.7890 | |
| 51 | E | H | 0.1259 | |
| 52 | W | H | 0.2327 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | G | H | 0.0000 | |
| 56 | V | H | 0.0000 | |
| 57 | I | H | 1.4923 | |
| 58 | P | H | 1.0978 | |
| 59 | I | H | 2.6019 | |
| 62 | V | H | 2.1633 | |
| 63 | D | H | 0.3352 | |
| 64 | I | H | 1.7463 | |
| 65 | A | H | 0.0547 | |
| 66 | N | H | -1.1883 | |
| 67 | Y | H | -1.3157 | |
| 68 | A | H | -1.4782 | |
| 69 | Q | H | -2.3370 | |
| 70 | R | H | -1.7561 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.7784 | |
| 74 | G | H | -1.7632 | |
| 75 | R | H | -1.5186 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -1.0198 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5233 | |
| 80 | R | H | -1.4550 | |
| 81 | D | H | -1.9000 | |
| 82 | E | H | -2.7779 | |
| 83 | A | H | -1.8754 | |
| 84 | K | H | -2.6059 | |
| 85 | N | H | -2.1399 | |
| 86 | T | H | 0.0000 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.6241 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.2693 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.3320 | |
| 93 | S | H | -1.0893 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.1048 | |
| 96 | S | H | -1.8364 | |
| 97 | E | H | -2.2701 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8356 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.2106 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | -0.0314 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | S | H | 0.0000 | |
| 107 | T | H | 0.0000 | |
| 108 | L | H | 1.5749 | |
| 109 | G | H | 1.6489 | |
| 110 | L | H | 2.4636 | |
| 111 | V | H | 2.4478 | |
| 112 | L | H | 1.1377 | |
| 113 | D | H | -0.7277 | |
| 114 | A | H | -0.2848 | |
| 115 | M | H | -0.4911 | |
| 116 | D | H | -1.5253 | |
| 117 | R | H | -1.2932 | |
| 118 | W | H | -0.6559 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.3704 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.9339 | |
| 123 | Q | H | -0.8275 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2538 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8481 | |
| 128 | S | H | -0.6494 |