| Chain sequence(s) |
A: EMEVPEPDPDELANAAYGGWYQMGMDEVMIDAILQAVCACAAVEAHAKQLRLQRVCLGLAAYFASEQMGTSSLVGSGIEQVLTQIMTNFAGEGTTMQLSCVIINSIAMTSGDMYEEIKTSALLSALKTSVGKMATKKPEEKALKETCAATLEAASSGEDPFDAFSKTVTELDFKFTEWNVDPYPNGVHDLPSNVKEALRKGGKLKVFLPEKEKEEIRWRSSQDLNVFEWCMGNDQDYNNRIPIVRIRNVAKGLVHPALKAAAKKEPRKVAAKFTMCLFGPPNDDFPEGVELPMVAKSQKERDAFVEMMVQWRDAATYNF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:02)
[INFO] Main: Simulation completed successfully. (00:09:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.5680 | |
| 2 | M | A | -0.2615 | |
| 3 | E | A | -1.2774 | |
| 4 | V | A | 0.3273 | |
| 5 | P | A | -0.9600 | |
| 6 | E | A | -2.2917 | |
| 7 | P | A | -2.1675 | |
| 8 | D | A | -3.4235 | |
| 9 | P | A | -2.4489 | |
| 10 | D | A | -3.0685 | |
| 11 | E | A | -2.9168 | |
| 12 | L | A | -0.8158 | |
| 13 | A | A | -0.9023 | |
| 14 | N | A | -1.0563 | |
| 15 | A | A | -0.3224 | |
| 16 | A | A | 0.3818 | |
| 17 | Y | A | 0.5681 | |
| 18 | G | A | 0.0067 | |
| 19 | G | A | -0.3294 | |
| 20 | W | A | 0.0000 | |
| 21 | Y | A | -0.3001 | |
| 22 | Q | A | -0.6130 | |
| 23 | M | A | 0.1343 | |
| 24 | G | A | -0.5130 | |
| 25 | M | A | 0.0000 | |
| 26 | D | A | -1.7488 | |
| 27 | E | A | -1.6377 | |
| 28 | V | A | 0.5238 | |
| 29 | M | A | 0.1797 | |
| 30 | I | A | 0.0000 | |
| 31 | D | A | -0.7444 | |
| 32 | A | A | 0.0397 | |
| 33 | I | A | 0.2756 | |
| 34 | L | A | 0.0000 | |
| 35 | Q | A | -1.0088 | |
| 36 | A | A | -0.2284 | |
| 37 | V | A | 0.2757 | |
| 38 | C | A | 0.0000 | |
| 39 | A | A | 0.1366 | |
| 40 | C | A | 0.1638 | |
| 41 | A | A | 0.0000 | |
| 42 | A | A | -0.3483 | |
| 43 | V | A | -0.3370 | |
| 44 | E | A | -2.0243 | |
| 45 | A | A | -1.3148 | |
| 46 | H | A | -1.1587 | |
| 47 | A | A | -1.4970 | |
| 48 | K | A | -2.4932 | |
| 49 | Q | A | -1.7180 | |
| 50 | L | A | -0.5633 | |
| 51 | R | A | -0.5558 | |
| 52 | L | A | 0.2416 | |
| 53 | Q | A | 0.0000 | |
| 54 | R | A | 0.4532 | |
| 55 | V | A | 1.4106 | |
| 56 | C | A | 0.0000 | |
| 57 | L | A | 0.0000 | |
| 58 | G | A | 0.0000 | |
| 59 | L | A | 0.9991 | |
| 60 | A | A | 0.0000 | |
| 61 | A | A | 0.0000 | |
| 62 | Y | A | -0.1554 | |
| 63 | F | A | 0.0000 | |
| 64 | A | A | 0.0000 | |
| 65 | S | A | -0.9734 | |
| 66 | E | A | -1.2794 | |
| 67 | Q | A | -1.3936 | |
| 68 | M | A | -1.3647 | |
| 69 | G | A | -1.0242 | |
| 70 | T | A | 0.0000 | |
| 71 | S | A | -0.5795 | |
| 72 | S | A | -0.7367 | |
| 73 | L | A | 0.0000 | |
| 74 | V | A | 0.0000 | |
| 75 | G | A | -0.9659 | |
| 76 | S | A | -0.8600 | |
| 77 | G | A | -0.9937 | |
| 78 | I | A | 0.0000 | |
| 79 | E | A | -1.3692 | |
| 80 | Q | A | -1.5043 | |
| 81 | V | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | T | A | -0.8920 | |
| 84 | Q | A | -1.4871 | |
| 85 | I | A | 0.0000 | |
| 86 | M | A | 0.0000 | |
| 87 | T | A | -0.4047 | |
| 88 | N | A | -0.8172 | |
| 89 | F | A | -0.6085 | |
| 90 | A | A | -0.9164 | |
| 91 | G | A | -1.2839 | |
| 92 | E | A | -0.6944 | |
| 93 | G | A | -0.5713 | |
| 94 | T | A | -0.3731 | |
| 95 | T | A | 0.0000 | |
| 96 | M | A | 0.0000 | |
| 97 | Q | A | -0.0837 | |
| 98 | L | A | 0.0000 | |
| 99 | S | A | 0.0000 | |
| 100 | C | A | 0.0000 | |
| 101 | V | A | 0.0000 | |
| 102 | I | A | 0.0000 | |
| 103 | I | A | 0.0000 | |
| 104 | N | A | 0.0000 | |
| 105 | S | A | 0.0000 | |
| 106 | I | A | 0.0000 | |
| 107 | A | A | 0.0000 | |
| 108 | M | A | 0.3685 | |
| 109 | T | A | -0.2138 | |
| 110 | S | A | -0.6615 | |
| 111 | G | A | -1.5423 | |
| 112 | D | A | -2.9523 | |
| 113 | M | A | -2.1653 | |
| 114 | Y | A | 0.0000 | |
| 115 | E | A | -3.6537 | |
| 116 | E | A | -3.4979 | |
| 117 | I | A | 0.0000 | |
| 118 | K | A | -2.4250 | |
| 119 | T | A | -1.3998 | |
| 120 | S | A | -0.4002 | |
| 121 | A | A | -0.6726 | |
| 122 | L | A | 0.0000 | |
| 123 | L | A | -0.6242 | |
| 124 | S | A | -0.7173 | |
| 125 | A | A | 0.0000 | |
| 126 | L | A | 0.0000 | |
| 127 | K | A | -2.2742 | |
| 128 | T | A | -1.5005 | |
| 129 | S | A | 0.0000 | |
| 130 | V | A | 0.0000 | |
| 131 | G | A | -1.8116 | |
| 132 | K | A | -2.2784 | |
| 133 | M | A | 0.0000 | |
| 134 | A | A | -1.9645 | |
| 135 | T | A | -2.7740 | |
| 136 | K | A | -3.2099 | |
| 137 | K | A | -3.6705 | |
| 138 | P | A | -2.8595 | |
| 139 | E | A | -3.4984 | |
| 140 | E | A | -3.2807 | |
| 141 | K | A | -3.2618 | |
| 142 | A | A | -2.1699 | |
| 143 | L | A | -1.7080 | |
| 144 | K | A | -2.1545 | |
| 145 | E | A | -2.3834 | |
| 146 | T | A | -1.0767 | |
| 147 | C | A | 0.0000 | |
| 148 | A | A | -1.4332 | |
| 149 | A | A | -1.2863 | |
| 150 | T | A | 0.0000 | |
| 151 | L | A | -1.3221 | |
| 152 | E | A | -2.0685 | |
| 153 | A | A | 0.0000 | |
| 154 | A | A | 0.0000 | |
| 155 | S | A | -1.4602 | |
| 156 | S | A | -1.7237 | |
| 157 | G | A | -1.9713 | |
| 158 | E | A | -3.0427 | |
| 159 | D | A | -2.6469 | |
| 160 | P | A | -1.6299 | |
| 161 | F | A | -0.3390 | |
| 162 | D | A | -2.2919 | |
| 163 | A | A | -2.1176 | |
| 164 | F | A | 0.0000 | |
| 165 | S | A | -1.0504 | |
| 166 | K | A | -1.7772 | |
| 167 | T | A | -0.9286 | |
| 168 | V | A | -0.3320 | |
| 169 | T | A | -1.0089 | |
| 170 | E | A | -1.6448 | |
| 171 | L | A | -0.8158 | |
| 172 | D | A | -0.8778 | |
| 173 | F | A | 0.5244 | |
| 174 | K | A | -1.0079 | |
| 175 | F | A | -0.1446 | |
| 176 | T | A | 0.0000 | |
| 177 | E | A | -0.1709 | |
| 178 | W | A | 0.7645 | |
| 179 | N | A | -0.5593 | |
| 180 | V | A | 0.4097 | |
| 181 | D | A | -0.7171 | |
| 182 | P | A | -0.8406 | |
| 183 | Y | A | -0.9613 | |
| 184 | P | A | -1.1760 | |
| 185 | N | A | -2.0405 | |
| 186 | G | A | -1.5530 | |
| 187 | V | A | 0.0000 | |
| 188 | H | A | -2.0853 | |
| 189 | D | A | -1.7702 | |
| 190 | L | A | 0.0000 | |
| 191 | P | A | -1.2267 | |
| 192 | S | A | -1.6437 | |
| 193 | N | A | -2.0257 | |
| 194 | V | A | -1.5159 | |
| 195 | K | A | -2.5995 | |
| 196 | E | A | -3.2792 | |
| 197 | A | A | -2.1573 | |
| 198 | L | A | 0.0000 | |
| 199 | R | A | -3.0041 | |
| 200 | K | A | -2.8621 | |
| 201 | G | A | 0.0000 | |
| 202 | G | A | -1.6579 | |
| 203 | K | A | -2.3731 | |
| 204 | L | A | 0.0000 | |
| 205 | K | A | -2.0165 | |
| 206 | V | A | 0.0000 | |
| 207 | F | A | 0.0000 | |
| 208 | L | A | -1.8421 | |
| 209 | P | A | -1.8778 | |
| 210 | E | A | -2.9748 | |
| 211 | K | A | -3.3348 | |
| 212 | E | A | -3.4491 | |
| 213 | K | A | -3.2425 | |
| 214 | E | A | -2.1899 | |
| 215 | E | A | -2.0036 | |
| 216 | I | A | 0.0000 | |
| 217 | R | A | -1.9154 | |
| 218 | W | A | 0.0000 | |
| 219 | R | A | -1.7093 | |
| 220 | S | A | 0.0000 | |
| 221 | S | A | -2.0954 | |
| 222 | Q | A | -2.8879 | |
| 223 | D | A | -2.9408 | |
| 224 | L | A | 0.0000 | |
| 225 | N | A | -1.7888 | |
| 226 | V | A | -1.4425 | |
| 227 | F | A | 0.0000 | |
| 228 | E | A | -1.7575 | |
| 229 | W | A | 0.0000 | |
| 230 | C | A | 0.0000 | |
| 231 | M | A | -1.5591 | |
| 232 | G | A | -1.6138 | |
| 233 | N | A | -2.3548 | |
| 234 | D | A | -2.7952 | |
| 235 | Q | A | -2.9259 | |
| 236 | D | A | -3.0975 | |
| 237 | Y | A | -2.1805 | |
| 238 | N | A | -2.5522 | |
| 239 | N | A | -2.1600 | |
| 240 | R | A | -2.5251 | |
| 241 | I | A | 0.0000 | |
| 242 | P | A | -1.0252 | |
| 243 | I | A | 0.0000 | |
| 244 | V | A | -0.3597 | |
| 245 | R | A | -1.6841 | |
| 246 | I | A | 0.0000 | |
| 247 | R | A | -2.6730 | |
| 248 | N | A | -2.3992 | |
| 249 | V | A | 0.0000 | |
| 250 | A | A | -0.6513 | |
| 251 | K | A | -1.4206 | |
| 252 | G | A | -0.5630 | |
| 253 | L | A | -0.0388 | |
| 254 | V | A | 0.8794 | |
| 255 | H | A | -0.1155 | |
| 256 | P | A | -0.5621 | |
| 257 | A | A | -0.8371 | |
| 258 | L | A | 0.0000 | |
| 259 | K | A | -2.0945 | |
| 260 | A | A | -2.0619 | |
| 261 | A | A | -2.5556 | |
| 262 | A | A | -2.8382 | |
| 263 | K | A | -3.3500 | |
| 264 | K | A | -3.4800 | |
| 265 | E | A | -3.0430 | |
| 266 | P | A | -3.0443 | |
| 267 | R | A | -3.3170 | |
| 268 | K | A | -3.3966 | |
| 269 | V | A | 0.0000 | |
| 270 | A | A | -1.9564 | |
| 271 | A | A | -1.1518 | |
| 272 | K | A | -2.6950 | |
| 273 | F | A | -2.3234 | |
| 274 | T | A | 0.0000 | |
| 275 | M | A | 0.0000 | |
| 276 | C | A | 0.0000 | |
| 277 | L | A | 0.0000 | |
| 278 | F | A | -1.2538 | |
| 279 | G | A | 0.0000 | |
| 280 | P | A | -1.2620 | |
| 281 | P | A | -1.8431 | |
| 282 | N | A | -2.3793 | |
| 283 | D | A | -3.0561 | |
| 284 | D | A | -3.1701 | |
| 285 | F | A | -2.1528 | |
| 286 | P | A | -2.1576 | |
| 287 | E | A | -2.5446 | |
| 288 | G | A | 0.0000 | |
| 289 | V | A | 0.0000 | |
| 290 | E | A | -1.2697 | |
| 291 | L | A | 0.0000 | |
| 292 | P | A | 0.0000 | |
| 293 | M | A | 0.0000 | |
| 294 | V | A | -1.4166 | |
| 295 | A | A | 0.0000 | |
| 296 | K | A | -2.9355 | |
| 297 | S | A | -2.5921 | |
| 298 | Q | A | -2.9734 | |
| 299 | K | A | -3.1304 | |
| 300 | E | A | -2.4155 | |
| 301 | R | A | 0.0000 | |
| 302 | D | A | -2.5683 | |
| 303 | A | A | -1.6121 | |
| 304 | F | A | 0.0000 | |
| 305 | V | A | -1.2356 | |
| 306 | E | A | -2.1727 | |
| 307 | M | A | -0.8266 | |
| 308 | M | A | 0.0000 | |
| 309 | V | A | -0.7525 | |
| 310 | Q | A | -0.7943 | |
| 311 | W | A | 0.0000 | |
| 312 | R | A | -1.1173 | |
| 313 | D | A | -0.3623 | |
| 314 | A | A | 0.0000 | |
| 315 | A | A | 0.0000 | |
| 316 | T | A | 0.2651 | |
| 317 | Y | A | 0.1557 | |
| 318 | N | A | -0.1969 | |
| 319 | F | A | 1.6021 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine