Project name: H3-1

Status: done

Started: 2026-01-17 14:50:35
Settings
Chain sequence(s) A: DVQLVESGGGLVQPGGSLKLSCAASGSIGGLNAMAWYRQAPGKERELVAGIFGVGSARYADSVKGRFTISRDNSKNTVYLQMNSLRPEDTAVYYCRMSSVTRGSSDYWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:09)
Show buried residues

Minimal score value
-3.7705
Maximal score value
1.7072
Average score
-0.6964
Total score value
-82.1782

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.2421
2 V A 0.0000
3 Q A -1.4174
4 L A 0.0000
5 V A 1.1007
6 E A 0.4590
7 S A -0.2338
8 G A -0.7757
9 G A 0.1240
10 G A 0.6892
11 L A 1.4294
12 V A -0.0562
13 Q A -1.3476
14 P A -1.5644
15 G A -1.3578
16 G A -0.9369
17 S A -1.2332
18 L A -0.8593
19 K A -1.9856
20 L A 0.0000
21 S A -0.3203
22 C A 0.0000
23 A A -0.1559
24 A A 0.0000
25 S A -1.0959
26 G A -1.4862
27 S A -1.0976
28 I A -0.9828
29 G A -0.6629
30 G A -0.8069
31 L A 0.0000
32 N A 0.0218
33 A A 0.0452
34 M A 0.0000
35 A A 0.0000
36 W A 0.0000
37 Y A -0.2671
38 R A 0.0000
39 Q A -1.9734
40 A A -1.8387
41 P A -1.6417
42 G A -2.0013
43 K A -3.4688
44 E A -3.7705
45 R A -3.0210
46 E A -2.1550
47 L A -0.6373
48 V A 0.0000
49 A A 0.0000
50 G A 0.0000
51 I A 0.0000
52 F A 0.1947
53 G A 0.3533
54 V A 1.4007
55 G A 0.1719
56 S A -0.2295
57 A A -0.7208
58 R A -2.0615
59 Y A -1.6150
60 A A -1.6797
61 D A -2.6616
62 S A -1.7386
63 V A 0.0000
64 K A -2.8807
65 G A -1.7760
66 R A -1.5834
67 F A 0.0000
68 T A -1.0417
69 I A 0.0000
70 S A -0.5429
71 R A -0.9797
72 D A -1.8462
73 N A -2.4343
74 S A -1.9287
75 K A -2.5974
76 N A -1.9918
77 T A 0.0000
78 V A 0.0000
79 Y A -0.4532
80 L A 0.0000
81 Q A -1.2610
82 M A 0.0000
83 N A -1.3972
84 S A -1.1551
85 L A 0.0000
86 R A -2.1882
87 P A -1.8928
88 E A -2.3361
89 D A 0.0000
90 T A -0.4519
91 A A 0.0000
92 V A 0.6462
93 Y A 0.0000
94 Y A 0.0821
95 C A 0.0000
96 R A -0.4978
97 M A 0.0000
98 S A -0.4684
99 S A 0.0000
100 V A 0.7353
101 T A -0.2011
102 R A -1.2631
103 G A -0.8479
104 S A -0.4831
105 S A -0.9373
106 D A -1.3619
107 Y A -0.8520
108 W A -0.1952
109 G A -0.2187
110 Q A -0.9299
111 G A 0.0520
112 T A 0.5987
113 L A 1.7072
114 V A 0.0000
115 T A 0.3592
116 V A 0.0000
117 S A -0.7484
118 S A -0.5057
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Laboratory of Theory of Biopolymers 2018