| Chain sequence(s) |
A: DVQLVESGGGLVQPGGSLKLSCAASGSIGGLNAMAWYRQAPGKERELVAGIFGVGSARYADSVKGRFTISRDNSKNTVYLQMNSLRPEDTAVYYCRMSSVTRGSSDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:08)
[INFO] Main: Simulation completed successfully. (00:02:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.2421 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.4174 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.1007 | |
| 6 | E | A | 0.4590 | |
| 7 | S | A | -0.2338 | |
| 8 | G | A | -0.7757 | |
| 9 | G | A | 0.1240 | |
| 10 | G | A | 0.6892 | |
| 11 | L | A | 1.4294 | |
| 12 | V | A | -0.0562 | |
| 13 | Q | A | -1.3476 | |
| 14 | P | A | -1.5644 | |
| 15 | G | A | -1.3578 | |
| 16 | G | A | -0.9369 | |
| 17 | S | A | -1.2332 | |
| 18 | L | A | -0.8593 | |
| 19 | K | A | -1.9856 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3203 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1559 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.0959 | |
| 26 | G | A | -1.4862 | |
| 27 | S | A | -1.0976 | |
| 28 | I | A | -0.9828 | |
| 29 | G | A | -0.6629 | |
| 30 | G | A | -0.8069 | |
| 31 | L | A | 0.0000 | |
| 32 | N | A | 0.0218 | |
| 33 | A | A | 0.0452 | |
| 34 | M | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.2671 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.9734 | |
| 40 | A | A | -1.8387 | |
| 41 | P | A | -1.6417 | |
| 42 | G | A | -2.0013 | |
| 43 | K | A | -3.4688 | |
| 44 | E | A | -3.7705 | |
| 45 | R | A | -3.0210 | |
| 46 | E | A | -2.1550 | |
| 47 | L | A | -0.6373 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | F | A | 0.1947 | |
| 53 | G | A | 0.3533 | |
| 54 | V | A | 1.4007 | |
| 55 | G | A | 0.1719 | |
| 56 | S | A | -0.2295 | |
| 57 | A | A | -0.7208 | |
| 58 | R | A | -2.0615 | |
| 59 | Y | A | -1.6150 | |
| 60 | A | A | -1.6797 | |
| 61 | D | A | -2.6616 | |
| 62 | S | A | -1.7386 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.8807 | |
| 65 | G | A | -1.7760 | |
| 66 | R | A | -1.5834 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -1.0417 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.5429 | |
| 71 | R | A | -0.9797 | |
| 72 | D | A | -1.8462 | |
| 73 | N | A | -2.4343 | |
| 74 | S | A | -1.9287 | |
| 75 | K | A | -2.5974 | |
| 76 | N | A | -1.9918 | |
| 77 | T | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.4532 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.2610 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.3972 | |
| 84 | S | A | -1.1551 | |
| 85 | L | A | 0.0000 | |
| 86 | R | A | -2.1882 | |
| 87 | P | A | -1.8928 | |
| 88 | E | A | -2.3361 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -0.4519 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | 0.6462 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | 0.0821 | |
| 95 | C | A | 0.0000 | |
| 96 | R | A | -0.4978 | |
| 97 | M | A | 0.0000 | |
| 98 | S | A | -0.4684 | |
| 99 | S | A | 0.0000 | |
| 100 | V | A | 0.7353 | |
| 101 | T | A | -0.2011 | |
| 102 | R | A | -1.2631 | |
| 103 | G | A | -0.8479 | |
| 104 | S | A | -0.4831 | |
| 105 | S | A | -0.9373 | |
| 106 | D | A | -1.3619 | |
| 107 | Y | A | -0.8520 | |
| 108 | W | A | -0.1952 | |
| 109 | G | A | -0.2187 | |
| 110 | Q | A | -0.9299 | |
| 111 | G | A | 0.0520 | |
| 112 | T | A | 0.5987 | |
| 113 | L | A | 1.7072 | |
| 114 | V | A | 0.0000 | |
| 115 | T | A | 0.3592 | |
| 116 | V | A | 0.0000 | |
| 117 | S | A | -0.7484 | |
| 118 | S | A | -0.5057 |