Project name: c02934af375513b

Status: done

Started: 2026-07-24 14:43:38
Settings
Chain sequence(s) H: EVALQQSGAELVKPGASVKLSCAASGFTIKDAYMHWVKQKPEQGLEWIGRIDSGSSNTNYDPTFKGKATITADDSSNTAYLQMSSLTSEDTAVYYCARVYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVSVPTSTETVTCNVAHAPSSTKVDKKIVPR
L: DIVMTQSPSSLTVTTGEKVTMTCKSSQSLLNSGAQKNYLTWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLSISGVQAEDLAVYYCQNNYNYPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:38)
Show buried residues

Minimal score value
-3.5056
Maximal score value
1.5539
Average score
-0.7351
Total score value
-317.5583

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D L -1.4204
2 I L 0.0000
3 V L 0.6945
4 M L 0.0000
5 T L -0.4685
6 Q L 0.0000
7 S L -0.7269
8 P L -0.6048
9 S L -0.6089
10 S L -0.6325
11 L L -0.3539
12 T L -0.6935
13 V L 0.0000
14 T L -1.7305
15 T L -1.7000
16 G L -2.0089
17 E L -3.0886
18 K L -2.9570
19 V L 0.0000
20 T L -0.6357
21 M L 0.0000
22 T L -0.8364
23 C L 0.0000
24 K L -2.2754
25 S L 0.0000
26 S L -1.0540
27 Q L -1.3867
28 S L -0.8716
29 L L 0.0000
30 L L 0.0555
31 N L -0.5806
32 S L -0.9172
33 G L -1.0203
34 A L -0.9064
35 Q L -1.4887
36 K L -0.8916
37 N L -0.1135
38 Y L 0.5802
39 L L 0.0000
40 T L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.8607
44 Q L 0.0000
45 K L -1.5104
46 P L -1.4437
47 G L -1.4482
48 Q L -2.0978
49 S L -1.4421
50 P L 0.0000
51 K L -1.8070
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.2136
56 W L 0.4717
57 A L 0.0000
58 S L -0.4680
59 T L -0.5873
60 R L -1.5713
61 E L -1.5905
62 S L -0.8965
63 G L -1.0556
64 V L -1.2567
65 P L -1.4096
66 D L -2.3281
67 R L -1.7259
68 F L 0.0000
69 T L -0.8465
70 G L -0.3402
71 S L -0.5329
72 G L -1.1278
73 S L -1.0212
74 G L -1.0191
75 T L -1.7670
76 D L -2.6080
77 F L 0.0000
78 T L -0.7787
79 L L 0.0000
80 S L -0.5889
81 I L 0.0000
82 S L -2.1030
83 G L -1.8874
84 V L 0.0000
85 Q L -1.7914
86 A L -1.1567
87 E L -1.9593
88 D L 0.0000
89 L L -0.7483
90 A L 0.0000
91 V L -0.3894
92 Y L 0.0000
93 Y L 0.0000
94 C L 0.0000
95 Q L 0.0000
96 N L 0.0000
97 N L 0.6834
98 Y L 0.8157
99 N L 0.0013
100 Y L 0.5230
101 P L -0.1896
102 L L 0.0000
103 T L -0.0990
104 F L 0.0000
105 G L -0.1496
106 A L -0.5468
107 G L 0.0000
108 T L 0.0000
109 K L -0.9577
110 L L 0.0000
111 E L -1.2688
112 L L -1.2316
113 K L -2.3768
114 R L -2.4780
115 A L -1.8302
116 D L -2.7092
117 A L -1.4696
118 A L -0.7405
119 P L 0.0000
120 T L -0.2180
121 V L 0.0000
122 S L 0.0019
123 I L 0.0068
124 F L 0.0000
125 P L -0.5172
126 P L -0.4372
127 S L -0.8337
128 S L -1.1083
129 E L -1.5510
130 Q L 0.0000
131 L L -1.1680
132 T L -0.8688
133 S L -0.8624
134 G L -1.1563
135 G L -1.0189
136 A L 0.0000
137 S L 0.0000
138 V L 0.0000
139 V L 0.0000
140 C L 0.0000
141 F L 0.0000
142 L L 0.0000
143 N L 0.0000
144 N L -0.9773
145 F L 0.0000
146 Y L 0.0000
147 P L -2.4057
148 K L -2.4103
149 D L -2.8013
150 I L 0.0000
151 N L -2.0026
152 V L -0.8271
153 K L -1.7799
154 W L 0.0000
155 K L -2.5002
156 I L 0.0000
157 D L -2.1703
158 G L -1.7807
159 S L -2.1112
160 E L -3.3378
161 R L -2.9001
162 Q L -2.7674
163 N L -2.1987
164 G L -0.9701
165 V L -0.5258
166 L L 0.0547
167 N L -0.3110
168 S L -0.0008
169 W L -0.2171
170 T L -1.0923
171 D L -2.1462
172 Q L -1.8262
173 D L -1.9798
174 S L -1.8766
175 K L -2.2971
176 D L -2.1109
177 S L 0.0000
178 T L 0.0000
179 Y L 0.0000
180 S L 0.0000
181 M L 0.0000
182 S L 0.0000
183 S L 0.0000
184 T L 0.0000
185 L L 0.0000
186 T L -0.2206
187 L L -0.7599
188 T L -1.4828
189 K L -2.4125
190 D L -3.0138
191 E L -2.4606
192 Y L 0.0000
193 E L -3.4691
194 R L -3.5056
195 H L -2.8748
196 N L -2.9240
197 S L -1.9938
198 Y L 0.0000
199 T L 0.0000
200 C L 0.0000
201 E L -0.7267
202 A L 0.0000
203 T L -1.1181
204 H L 0.0000
205 K L -2.7334
206 T L -1.4359
207 S L -0.8860
208 T L -0.5770
209 S L -0.3732
210 P L -0.4303
211 I L 0.5154
212 V L 1.0017
213 K L -0.3042
214 S L -0.6549
215 F L 0.0000
216 N L -2.3492
217 R L -2.6715
218 N L -2.6958
219 E L -2.5594
220 C L -0.9752
1 E H -1.7418
2 V H -0.4445
3 A H -0.6549
4 L H 0.0000
5 Q H -1.4744
6 Q H 0.0000
7 S H -0.9917
8 G H -0.8629
9 A H -0.5844
10 E H -0.9165
11 L H -0.3778
12 V H 0.0000
13 K H -2.0419
14 P H -1.1669
15 G H -1.0510
16 A H -0.8455
17 S H -0.9549
18 V H -0.9417
19 K H -1.3905
20 L H 0.0000
21 S H -0.7206
22 C H 0.0000
23 A H -0.7022
24 A H 0.0000
25 S H -0.9078
26 G H -1.1476
27 F H -0.7952
28 T H -1.2385
29 I H 0.0000
30 K H -3.0570
31 D H -2.7720
32 A H -1.3567
33 Y H -0.7638
34 M H 0.0000
35 H H 0.0000
36 W H 0.0000
37 V H 0.0000
38 K H 0.0000
39 Q H 0.0000
40 K H -2.0337
41 P H -1.9836
42 E H -2.7263
43 Q H -2.5884
44 G H -1.6185
45 L H 0.0000
46 E H -1.7985
47 W H 0.0000
48 I H 0.0000
49 G H 0.0000
50 R H -0.5629
51 I H -0.5318
52 D H -1.3949
53 S H -1.7747
54 G H -2.0046
55 S H -1.2993
56 S H -1.1163
57 N H -1.4964
58 T H -1.1455
59 N H -1.4991
60 Y H -0.7989
61 D H -0.8665
62 P H -1.0230
63 T H -0.6792
64 F H -0.9549
65 K H -2.1835
66 G H -1.5588
67 K H -1.3023
68 A H 0.0000
69 T H -0.7810
70 I H 0.0000
71 T H -0.5140
72 A H -0.9371
73 D H -1.7715
74 D H -2.2788
75 S H -1.3176
76 S H -0.9908
77 N H -1.2359
78 T H -0.8806
79 A H 0.0000
80 Y H -0.4384
81 L H 0.0000
82 Q H -1.1231
83 M H 0.0000
84 S H -0.8390
85 S H -0.8704
86 L H 0.0000
87 T H -1.1226
88 S H -1.3098
89 E H -2.0260
90 D H 0.0000
91 T H -0.8100
92 A H 0.0000
93 V H -0.1810
94 Y H 0.0000
95 Y H 0.0000
96 C H 0.0000
97 A H 0.0000
98 R H 0.0000
99 V H 0.0000
105 Y H 1.5539
106 A H 0.8794
107 M H 0.3575
108 D H -0.3970
109 Y H 0.1731
110 W H -0.4336
111 G H 0.0000
112 Q H -1.7072
113 G H 0.0000
114 T H 0.0000
115 S H -0.4141
116 V H 0.0000
117 T H -0.5715
118 V H -0.9400
119 S H 0.0000
120 S H -1.3163
121 A H -1.3898
122 K H -2.0214
123 T H -1.1558
124 T H -0.7553
125 P H -0.7243
126 P H -0.2941
127 S H -0.2905
128 V H -0.3242
129 Y H 0.0000
130 P H -0.4586
131 L H 0.0000
132 A H 0.0000
133 P H -0.5774
134 G H -0.9323
135 S H -0.8184
136 A H -0.4921
137 A H -0.9857
138 Q H -1.6802
139 T H -1.1756
140 N H -1.6085
141 S H -0.4976
142 M H 0.8651
143 V H 0.7519
144 T H 0.3443
145 L H 0.0000
146 G H 0.0000
147 C H 0.0000
148 L H 0.0000
149 V H 0.0000
150 K H -0.0847
151 G H -0.0905
152 Y H 0.0000
153 F H 0.0000
154 P H -0.8234
155 E H -0.7975
156 P H -0.6906
157 V H -0.3325
158 T H -0.2461
159 V H -0.2046
160 T H -0.4082
161 W H 0.0000
162 N H -1.0296
163 S H -0.8129
164 G H -0.7750
165 S H -0.5655
166 L H -0.2639
167 S H -0.4387
168 S H -0.5334
169 G H -0.3206
170 V H -0.0026
171 H H -0.2488
172 T H -0.0466
173 F H 0.0000
174 P H -0.1483
175 A H 0.2630
176 V H 0.7674
177 L H 0.8995
178 Q H -0.2433
179 S H -0.4888
180 D H -0.9677
181 L H -0.2431
182 Y H 0.2975
183 T H 0.0000
184 L H 0.0000
185 S H 0.0000
186 S H 0.0000
187 S H 0.0000
188 V H 0.0000
189 S H 0.1894
190 V H 0.3026
191 P H 0.0513
192 T H -0.2653
193 S H -0.7051
194 T H -0.9151
195 E H -1.6600
196 T H -0.9385
197 V H -0.5002
198 T H 0.0000
199 C H 0.0000
200 N H -1.3416
201 V H 0.0000
202 A H -0.7966
203 H H 0.0000
204 A H -0.5186
205 P H -0.3770
206 S H -0.6860
207 S H -0.6597
208 T H -0.9002
209 K H -1.8503
210 V H -1.2154
211 D H -1.9892
212 K H -1.5031
213 K H -1.4534
214 I H 0.0000
215 V H 0.5333
216 P H -0.6066
217 R H -1.6270
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Laboratory of Theory of Biopolymers 2018