| Chain sequence(s) |
H: EVALQQSGAELVKPGASVKLSCAASGFTIKDAYMHWVKQKPEQGLEWIGRIDSGSSNTNYDPTFKGKATITADDSSNTAYLQMSSLTSEDTAVYYCARVYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVSVPTSTETVTCNVAHAPSSTKVDKKIVPR
L: DIVMTQSPSSLTVTTGEKVTMTCKSSQSLLNSGAQKNYLTWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLSISGVQAEDLAVYYCQNNYNYPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:36)
[INFO] Main: Simulation completed successfully. (00:04:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | L | -1.4204 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.6945 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.4685 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.7269 | |
| 8 | P | L | -0.6048 | |
| 9 | S | L | -0.6089 | |
| 10 | S | L | -0.6325 | |
| 11 | L | L | -0.3539 | |
| 12 | T | L | -0.6935 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -1.7305 | |
| 15 | T | L | -1.7000 | |
| 16 | G | L | -2.0089 | |
| 17 | E | L | -3.0886 | |
| 18 | K | L | -2.9570 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6357 | |
| 21 | M | L | 0.0000 | |
| 22 | T | L | -0.8364 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -2.2754 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -1.0540 | |
| 27 | Q | L | -1.3867 | |
| 28 | S | L | -0.8716 | |
| 29 | L | L | 0.0000 | |
| 30 | L | L | 0.0555 | |
| 31 | N | L | -0.5806 | |
| 32 | S | L | -0.9172 | |
| 33 | G | L | -1.0203 | |
| 34 | A | L | -0.9064 | |
| 35 | Q | L | -1.4887 | |
| 36 | K | L | -0.8916 | |
| 37 | N | L | -0.1135 | |
| 38 | Y | L | 0.5802 | |
| 39 | L | L | 0.0000 | |
| 40 | T | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.8607 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.5104 | |
| 46 | P | L | -1.4437 | |
| 47 | G | L | -1.4482 | |
| 48 | Q | L | -2.0978 | |
| 49 | S | L | -1.4421 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.8070 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.2136 | |
| 56 | W | L | 0.4717 | |
| 57 | A | L | 0.0000 | |
| 58 | S | L | -0.4680 | |
| 59 | T | L | -0.5873 | |
| 60 | R | L | -1.5713 | |
| 61 | E | L | -1.5905 | |
| 62 | S | L | -0.8965 | |
| 63 | G | L | -1.0556 | |
| 64 | V | L | -1.2567 | |
| 65 | P | L | -1.4096 | |
| 66 | D | L | -2.3281 | |
| 67 | R | L | -1.7259 | |
| 68 | F | L | 0.0000 | |
| 69 | T | L | -0.8465 | |
| 70 | G | L | -0.3402 | |
| 71 | S | L | -0.5329 | |
| 72 | G | L | -1.1278 | |
| 73 | S | L | -1.0212 | |
| 74 | G | L | -1.0191 | |
| 75 | T | L | -1.7670 | |
| 76 | D | L | -2.6080 | |
| 77 | F | L | 0.0000 | |
| 78 | T | L | -0.7787 | |
| 79 | L | L | 0.0000 | |
| 80 | S | L | -0.5889 | |
| 81 | I | L | 0.0000 | |
| 82 | S | L | -2.1030 | |
| 83 | G | L | -1.8874 | |
| 84 | V | L | 0.0000 | |
| 85 | Q | L | -1.7914 | |
| 86 | A | L | -1.1567 | |
| 87 | E | L | -1.9593 | |
| 88 | D | L | 0.0000 | |
| 89 | L | L | -0.7483 | |
| 90 | A | L | 0.0000 | |
| 91 | V | L | -0.3894 | |
| 92 | Y | L | 0.0000 | |
| 93 | Y | L | 0.0000 | |
| 94 | C | L | 0.0000 | |
| 95 | Q | L | 0.0000 | |
| 96 | N | L | 0.0000 | |
| 97 | N | L | 0.6834 | |
| 98 | Y | L | 0.8157 | |
| 99 | N | L | 0.0013 | |
| 100 | Y | L | 0.5230 | |
| 101 | P | L | -0.1896 | |
| 102 | L | L | 0.0000 | |
| 103 | T | L | -0.0990 | |
| 104 | F | L | 0.0000 | |
| 105 | G | L | -0.1496 | |
| 106 | A | L | -0.5468 | |
| 107 | G | L | 0.0000 | |
| 108 | T | L | 0.0000 | |
| 109 | K | L | -0.9577 | |
| 110 | L | L | 0.0000 | |
| 111 | E | L | -1.2688 | |
| 112 | L | L | -1.2316 | |
| 113 | K | L | -2.3768 | |
| 114 | R | L | -2.4780 | |
| 115 | A | L | -1.8302 | |
| 116 | D | L | -2.7092 | |
| 117 | A | L | -1.4696 | |
| 118 | A | L | -0.7405 | |
| 119 | P | L | 0.0000 | |
| 120 | T | L | -0.2180 | |
| 121 | V | L | 0.0000 | |
| 122 | S | L | 0.0019 | |
| 123 | I | L | 0.0068 | |
| 124 | F | L | 0.0000 | |
| 125 | P | L | -0.5172 | |
| 126 | P | L | -0.4372 | |
| 127 | S | L | -0.8337 | |
| 128 | S | L | -1.1083 | |
| 129 | E | L | -1.5510 | |
| 130 | Q | L | 0.0000 | |
| 131 | L | L | -1.1680 | |
| 132 | T | L | -0.8688 | |
| 133 | S | L | -0.8624 | |
| 134 | G | L | -1.1563 | |
| 135 | G | L | -1.0189 | |
| 136 | A | L | 0.0000 | |
| 137 | S | L | 0.0000 | |
| 138 | V | L | 0.0000 | |
| 139 | V | L | 0.0000 | |
| 140 | C | L | 0.0000 | |
| 141 | F | L | 0.0000 | |
| 142 | L | L | 0.0000 | |
| 143 | N | L | 0.0000 | |
| 144 | N | L | -0.9773 | |
| 145 | F | L | 0.0000 | |
| 146 | Y | L | 0.0000 | |
| 147 | P | L | -2.4057 | |
| 148 | K | L | -2.4103 | |
| 149 | D | L | -2.8013 | |
| 150 | I | L | 0.0000 | |
| 151 | N | L | -2.0026 | |
| 152 | V | L | -0.8271 | |
| 153 | K | L | -1.7799 | |
| 154 | W | L | 0.0000 | |
| 155 | K | L | -2.5002 | |
| 156 | I | L | 0.0000 | |
| 157 | D | L | -2.1703 | |
| 158 | G | L | -1.7807 | |
| 159 | S | L | -2.1112 | |
| 160 | E | L | -3.3378 | |
| 161 | R | L | -2.9001 | |
| 162 | Q | L | -2.7674 | |
| 163 | N | L | -2.1987 | |
| 164 | G | L | -0.9701 | |
| 165 | V | L | -0.5258 | |
| 166 | L | L | 0.0547 | |
| 167 | N | L | -0.3110 | |
| 168 | S | L | -0.0008 | |
| 169 | W | L | -0.2171 | |
| 170 | T | L | -1.0923 | |
| 171 | D | L | -2.1462 | |
| 172 | Q | L | -1.8262 | |
| 173 | D | L | -1.9798 | |
| 174 | S | L | -1.8766 | |
| 175 | K | L | -2.2971 | |
| 176 | D | L | -2.1109 | |
| 177 | S | L | 0.0000 | |
| 178 | T | L | 0.0000 | |
| 179 | Y | L | 0.0000 | |
| 180 | S | L | 0.0000 | |
| 181 | M | L | 0.0000 | |
| 182 | S | L | 0.0000 | |
| 183 | S | L | 0.0000 | |
| 184 | T | L | 0.0000 | |
| 185 | L | L | 0.0000 | |
| 186 | T | L | -0.2206 | |
| 187 | L | L | -0.7599 | |
| 188 | T | L | -1.4828 | |
| 189 | K | L | -2.4125 | |
| 190 | D | L | -3.0138 | |
| 191 | E | L | -2.4606 | |
| 192 | Y | L | 0.0000 | |
| 193 | E | L | -3.4691 | |
| 194 | R | L | -3.5056 | |
| 195 | H | L | -2.8748 | |
| 196 | N | L | -2.9240 | |
| 197 | S | L | -1.9938 | |
| 198 | Y | L | 0.0000 | |
| 199 | T | L | 0.0000 | |
| 200 | C | L | 0.0000 | |
| 201 | E | L | -0.7267 | |
| 202 | A | L | 0.0000 | |
| 203 | T | L | -1.1181 | |
| 204 | H | L | 0.0000 | |
| 205 | K | L | -2.7334 | |
| 206 | T | L | -1.4359 | |
| 207 | S | L | -0.8860 | |
| 208 | T | L | -0.5770 | |
| 209 | S | L | -0.3732 | |
| 210 | P | L | -0.4303 | |
| 211 | I | L | 0.5154 | |
| 212 | V | L | 1.0017 | |
| 213 | K | L | -0.3042 | |
| 214 | S | L | -0.6549 | |
| 215 | F | L | 0.0000 | |
| 216 | N | L | -2.3492 | |
| 217 | R | L | -2.6715 | |
| 218 | N | L | -2.6958 | |
| 219 | E | L | -2.5594 | |
| 220 | C | L | -0.9752 | |
| 1 | E | H | -1.7418 | |
| 2 | V | H | -0.4445 | |
| 3 | A | H | -0.6549 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.4744 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.9917 | |
| 8 | G | H | -0.8629 | |
| 9 | A | H | -0.5844 | |
| 10 | E | H | -0.9165 | |
| 11 | L | H | -0.3778 | |
| 12 | V | H | 0.0000 | |
| 13 | K | H | -2.0419 | |
| 14 | P | H | -1.1669 | |
| 15 | G | H | -1.0510 | |
| 16 | A | H | -0.8455 | |
| 17 | S | H | -0.9549 | |
| 18 | V | H | -0.9417 | |
| 19 | K | H | -1.3905 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.7206 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.7022 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.9078 | |
| 26 | G | H | -1.1476 | |
| 27 | F | H | -0.7952 | |
| 28 | T | H | -1.2385 | |
| 29 | I | H | 0.0000 | |
| 30 | K | H | -3.0570 | |
| 31 | D | H | -2.7720 | |
| 32 | A | H | -1.3567 | |
| 33 | Y | H | -0.7638 | |
| 34 | M | H | 0.0000 | |
| 35 | H | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | K | H | 0.0000 | |
| 39 | Q | H | 0.0000 | |
| 40 | K | H | -2.0337 | |
| 41 | P | H | -1.9836 | |
| 42 | E | H | -2.7263 | |
| 43 | Q | H | -2.5884 | |
| 44 | G | H | -1.6185 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -1.7985 | |
| 47 | W | H | 0.0000 | |
| 48 | I | H | 0.0000 | |
| 49 | G | H | 0.0000 | |
| 50 | R | H | -0.5629 | |
| 51 | I | H | -0.5318 | |
| 52 | D | H | -1.3949 | |
| 53 | S | H | -1.7747 | |
| 54 | G | H | -2.0046 | |
| 55 | S | H | -1.2993 | |
| 56 | S | H | -1.1163 | |
| 57 | N | H | -1.4964 | |
| 58 | T | H | -1.1455 | |
| 59 | N | H | -1.4991 | |
| 60 | Y | H | -0.7989 | |
| 61 | D | H | -0.8665 | |
| 62 | P | H | -1.0230 | |
| 63 | T | H | -0.6792 | |
| 64 | F | H | -0.9549 | |
| 65 | K | H | -2.1835 | |
| 66 | G | H | -1.5588 | |
| 67 | K | H | -1.3023 | |
| 68 | A | H | 0.0000 | |
| 69 | T | H | -0.7810 | |
| 70 | I | H | 0.0000 | |
| 71 | T | H | -0.5140 | |
| 72 | A | H | -0.9371 | |
| 73 | D | H | -1.7715 | |
| 74 | D | H | -2.2788 | |
| 75 | S | H | -1.3176 | |
| 76 | S | H | -0.9908 | |
| 77 | N | H | -1.2359 | |
| 78 | T | H | -0.8806 | |
| 79 | A | H | 0.0000 | |
| 80 | Y | H | -0.4384 | |
| 81 | L | H | 0.0000 | |
| 82 | Q | H | -1.1231 | |
| 83 | M | H | 0.0000 | |
| 84 | S | H | -0.8390 | |
| 85 | S | H | -0.8704 | |
| 86 | L | H | 0.0000 | |
| 87 | T | H | -1.1226 | |
| 88 | S | H | -1.3098 | |
| 89 | E | H | -2.0260 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | -0.8100 | |
| 92 | A | H | 0.0000 | |
| 93 | V | H | -0.1810 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | 0.0000 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | R | H | 0.0000 | |
| 99 | V | H | 0.0000 | |
| 105 | Y | H | 1.5539 | |
| 106 | A | H | 0.8794 | |
| 107 | M | H | 0.3575 | |
| 108 | D | H | -0.3970 | |
| 109 | Y | H | 0.1731 | |
| 110 | W | H | -0.4336 | |
| 111 | G | H | 0.0000 | |
| 112 | Q | H | -1.7072 | |
| 113 | G | H | 0.0000 | |
| 114 | T | H | 0.0000 | |
| 115 | S | H | -0.4141 | |
| 116 | V | H | 0.0000 | |
| 117 | T | H | -0.5715 | |
| 118 | V | H | -0.9400 | |
| 119 | S | H | 0.0000 | |
| 120 | S | H | -1.3163 | |
| 121 | A | H | -1.3898 | |
| 122 | K | H | -2.0214 | |
| 123 | T | H | -1.1558 | |
| 124 | T | H | -0.7553 | |
| 125 | P | H | -0.7243 | |
| 126 | P | H | -0.2941 | |
| 127 | S | H | -0.2905 | |
| 128 | V | H | -0.3242 | |
| 129 | Y | H | 0.0000 | |
| 130 | P | H | -0.4586 | |
| 131 | L | H | 0.0000 | |
| 132 | A | H | 0.0000 | |
| 133 | P | H | -0.5774 | |
| 134 | G | H | -0.9323 | |
| 135 | S | H | -0.8184 | |
| 136 | A | H | -0.4921 | |
| 137 | A | H | -0.9857 | |
| 138 | Q | H | -1.6802 | |
| 139 | T | H | -1.1756 | |
| 140 | N | H | -1.6085 | |
| 141 | S | H | -0.4976 | |
| 142 | M | H | 0.8651 | |
| 143 | V | H | 0.7519 | |
| 144 | T | H | 0.3443 | |
| 145 | L | H | 0.0000 | |
| 146 | G | H | 0.0000 | |
| 147 | C | H | 0.0000 | |
| 148 | L | H | 0.0000 | |
| 149 | V | H | 0.0000 | |
| 150 | K | H | -0.0847 | |
| 151 | G | H | -0.0905 | |
| 152 | Y | H | 0.0000 | |
| 153 | F | H | 0.0000 | |
| 154 | P | H | -0.8234 | |
| 155 | E | H | -0.7975 | |
| 156 | P | H | -0.6906 | |
| 157 | V | H | -0.3325 | |
| 158 | T | H | -0.2461 | |
| 159 | V | H | -0.2046 | |
| 160 | T | H | -0.4082 | |
| 161 | W | H | 0.0000 | |
| 162 | N | H | -1.0296 | |
| 163 | S | H | -0.8129 | |
| 164 | G | H | -0.7750 | |
| 165 | S | H | -0.5655 | |
| 166 | L | H | -0.2639 | |
| 167 | S | H | -0.4387 | |
| 168 | S | H | -0.5334 | |
| 169 | G | H | -0.3206 | |
| 170 | V | H | -0.0026 | |
| 171 | H | H | -0.2488 | |
| 172 | T | H | -0.0466 | |
| 173 | F | H | 0.0000 | |
| 174 | P | H | -0.1483 | |
| 175 | A | H | 0.2630 | |
| 176 | V | H | 0.7674 | |
| 177 | L | H | 0.8995 | |
| 178 | Q | H | -0.2433 | |
| 179 | S | H | -0.4888 | |
| 180 | D | H | -0.9677 | |
| 181 | L | H | -0.2431 | |
| 182 | Y | H | 0.2975 | |
| 183 | T | H | 0.0000 | |
| 184 | L | H | 0.0000 | |
| 185 | S | H | 0.0000 | |
| 186 | S | H | 0.0000 | |
| 187 | S | H | 0.0000 | |
| 188 | V | H | 0.0000 | |
| 189 | S | H | 0.1894 | |
| 190 | V | H | 0.3026 | |
| 191 | P | H | 0.0513 | |
| 192 | T | H | -0.2653 | |
| 193 | S | H | -0.7051 | |
| 194 | T | H | -0.9151 | |
| 195 | E | H | -1.6600 | |
| 196 | T | H | -0.9385 | |
| 197 | V | H | -0.5002 | |
| 198 | T | H | 0.0000 | |
| 199 | C | H | 0.0000 | |
| 200 | N | H | -1.3416 | |
| 201 | V | H | 0.0000 | |
| 202 | A | H | -0.7966 | |
| 203 | H | H | 0.0000 | |
| 204 | A | H | -0.5186 | |
| 205 | P | H | -0.3770 | |
| 206 | S | H | -0.6860 | |
| 207 | S | H | -0.6597 | |
| 208 | T | H | -0.9002 | |
| 209 | K | H | -1.8503 | |
| 210 | V | H | -1.2154 | |
| 211 | D | H | -1.9892 | |
| 212 | K | H | -1.5031 | |
| 213 | K | H | -1.4534 | |
| 214 | I | H | 0.0000 | |
| 215 | V | H | 0.5333 | |
| 216 | P | H | -0.6066 | |
| 217 | R | H | -1.6270 |