| Chain sequence(s) |
P: HAEGTFTSDVSSYLEGQAAKEFIAWLVKGR
input PDB |
| Selected Chain(s) | P |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with P chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:17)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 7 | H | P | -1.3155 | |
| 8 | A | P | -0.8591 | |
| 9 | E | P | -1.7752 | |
| 10 | G | P | -1.0415 | |
| 11 | T | P | -0.5337 | |
| 12 | F | P | 0.4869 | |
| 13 | T | P | -0.1226 | |
| 14 | S | P | -0.4152 | |
| 15 | D | P | -0.9225 | |
| 16 | V | P | 0.5317 | |
| 17 | S | P | 0.0077 | |
| 18 | S | P | -0.2089 | |
| 19 | Y | P | 0.8246 | |
| 20 | L | P | 0.6547 | |
| 21 | E | P | -1.2758 | |
| 22 | G | P | -0.8888 | |
| 23 | Q | P | -0.9446 | |
| 24 | A | P | -0.7107 | |
| 25 | A | P | -0.6282 | |
| 26 | K | P | -1.4825 | |
| 27 | E | P | -0.8541 | |
| 28 | F | P | 1.2523 | |
| 29 | I | P | 1.9102 | |
| 30 | A | P | 0.7915 | |
| 31 | W | P | 0.7973 | |
| 32 | L | P | 1.1283 | |
| 33 | V | P | 1.4852 | |
| 34 | K | P | -0.6949 | |
| 35 | G | P | -1.1783 | |
| 36 | R | P | -1.2274 |