Project name: query_structure

Status: done

Started: 2026-03-17 00:18:07
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Chain sequence(s) A: QLQLVESGGGLVQAGGSMRLSCAASISFSSFPMGWHRQAPGKQRELVAKTGIGGTAYDDSVKGRGTISRDNTKNTVYLQMNSLKVEDTAVYYCWGWRMNDYWGQGTQVYVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:18)
Show buried residues

Minimal score value
-3.0996
Maximal score value
1.5555
Average score
-0.7261
Total score value
-81.324

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.2912
2 L A -0.8870
3 Q A -1.0807
4 L A 0.0000
5 V A 0.4110
6 E A 0.0000
7 S A -0.7061
8 G A -1.2358
9 G A -0.7307
10 G A 0.4289
11 L A 1.5555
12 V A 0.5615
13 Q A -0.8346
14 A A -1.0620
15 G A -1.2779
16 G A -1.1896
17 S A -1.5214
18 M A 0.0000
19 R A -2.3090
20 L A 0.0000
21 S A -0.5745
22 C A 0.0000
23 A A -0.2517
24 A A 0.0000
25 S A -0.4415
26 I A 0.1304
27 S A -0.3070
28 F A 0.0000
29 S A -0.2317
30 S A -0.1827
31 F A 0.0000
32 P A -0.1291
33 M A 0.0000
34 G A 0.0000
35 W A 0.0000
36 H A -0.8609
37 R A -1.5023
38 Q A -2.1175
39 A A -2.0069
40 P A -1.5193
41 G A -1.8117
42 K A -3.0996
43 Q A -3.0321
44 R A -2.5497
45 E A -2.3386
46 L A -0.9251
47 V A 0.0000
48 A A 0.0000
49 K A -0.5883
50 T A 0.0000
51 G A 0.3954
52 I A 1.5394
53 G A 0.2351
54 G A -0.1273
55 T A -0.1642
56 A A -0.6228
57 Y A -1.0165
58 D A -1.9276
59 D A -2.6429
60 S A -1.9586
61 V A 0.0000
62 K A -2.7394
63 G A -1.8634
64 R A -1.4809
65 G A -1.4106
66 T A -0.9269
67 I A 0.0000
68 S A -0.6256
69 R A -1.2515
70 D A -1.5348
71 N A -1.6586
72 T A -1.4779
73 K A -2.1909
74 N A -1.4828
75 T A -0.9620
76 V A 0.0000
77 Y A -0.7061
78 L A 0.0000
79 Q A -1.3696
80 M A 0.0000
81 N A -1.7686
82 S A -1.4546
83 L A 0.0000
84 K A -1.7905
85 V A -0.5315
86 E A -1.6786
87 D A 0.0000
88 T A -0.1205
89 A A 0.0000
90 V A -0.5114
91 Y A 0.0000
92 Y A -0.3436
93 C A 0.0000
94 W A 0.1778
95 G A 0.0000
96 W A -0.6872
97 R A -1.6006
98 M A -0.4970
99 N A -1.7142
100 D A -1.7597
101 Y A -0.7370
102 W A -0.0197
103 G A -0.2014
104 Q A -1.0903
105 G A -0.6741
106 T A -0.7703
107 Q A -0.9234
108 V A 0.0000
109 Y A 1.2672
110 V A 0.0000
111 S A -0.0178
112 S A -0.3971
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Laboratory of Theory of Biopolymers 2018