Project name: P20-UbG76V-NL

Status: done

Started: 2026-04-17 08:34:08
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Chain sequence(s) A: MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGVGILARNLVPMVATVQGQNLKGPVFMCLGGLLTMVAGAVWLVLCCYVLEETSVMLAKRPLIVVTHTYLEPGPVTAQVVLQAAIQNAGLCTLVAMLLEETIFSSAFTITDQVPFSVQLRALDAWDFGSVGGVFTSVGKAVHQSPLTGGILGFVFTLTVPSERQLYPYDVPDYA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:12)
Show buried residues

Minimal score value
-4.3188
Maximal score value
4.6018
Average score
-0.002
Total score value
-0.5039

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -2.0794
2 Q A -2.4601
3 I A 0.0000
4 F A -0.6943
5 V A 0.0000
6 K A -0.8122
7 T A 0.0000
8 L A 0.9571
9 T A -0.0147
10 G A -0.9994
11 K A -1.8265
12 T A -0.9616
13 I A 0.0000
14 T A -1.0519
15 L A 0.0000
16 E A -2.5240
17 V A 0.0000
18 E A -2.7780
19 P A -1.9382
20 S A -1.4897
21 D A -1.7372
22 T A -2.6868
23 I A 0.0000
24 E A -3.6955
25 N A -2.2682
26 V A 0.0000
27 K A -2.4314
28 A A -2.1413
29 K A -2.8374
30 I A 0.0000
31 Q A -3.0218
32 D A -3.6946
33 K A -3.7681
34 E A -3.2904
35 G A -2.4253
36 I A -1.6830
37 P A -1.4702
38 P A -2.1565
39 D A -2.5566
40 Q A -1.7740
41 Q A 0.0000
42 R A -1.9519
43 L A 0.0000
44 I A -1.1498
45 F A -0.6171
46 A A -0.6321
47 G A -1.3413
48 K A -2.4206
49 Q A -2.6869
50 L A 0.0000
51 E A -4.0296
52 D A -4.3188
53 G A -3.0028
54 R A -3.3677
55 T A -2.7196
56 L A 0.0000
57 S A -2.1327
58 D A -2.3119
59 Y A -1.9326
60 N A -2.1404
61 I A 0.0000
62 Q A -2.8434
63 K A -3.2327
64 E A -2.7151
65 S A -1.6864
66 T A -0.7724
67 L A 0.0000
68 H A -0.3397
69 L A 0.0000
70 V A 0.2356
71 L A -0.0334
72 R A -0.9589
73 L A 0.3973
74 R A -1.0449
75 G A 0.7754
76 V A 2.1725
77 G A 0.9946
78 I A 2.0107
79 L A 2.4284
80 A A 1.2518
81 R A -0.1795
82 N A 0.2049
83 L A 2.1509
84 V A 2.3747
85 P A 1.4682
86 M A 2.3181
87 V A 2.9005
88 A A 1.4108
89 T A 0.7481
90 V A 0.6113
91 Q A -0.9354
92 G A -1.3367
93 Q A -2.1473
94 N A -2.1119
95 L A -0.9157
96 K A -1.4789
97 G A -0.1777
98 P A 0.8630
99 V A 1.8343
100 F A 1.9772
101 M A 2.2334
102 C A 2.4253
103 L A 2.6111
104 G A 1.9845
105 G A 1.8499
106 L A 2.7389
107 L A 2.6685
108 T A 1.9712
109 M A 2.6498
110 V A 3.1933
111 A A 2.5835
112 G A 2.5139
113 A A 3.1489
114 V A 4.0223
115 W A 4.0061
116 L A 4.1793
117 V A 4.6018
118 L A 4.4900
119 C A 3.5589
120 C A 2.9925
121 Y A 2.7420
122 V A 2.5048
123 L A 1.6903
124 E A -0.2850
125 E A -0.7560
126 T A 0.4840
127 S A 0.6638
128 V A 1.4165
129 M A 0.9765
130 L A -0.0010
131 A A -0.4548
132 K A -2.2598
133 R A -2.2770
134 P A -0.7342
135 L A 0.7639
136 I A 1.7083
137 V A 2.4864
138 V A 1.9050
139 T A 0.5894
140 H A 0.5613
141 T A 0.5755
142 Y A 1.8879
143 L A 1.4139
144 E A -0.7966
145 P A -0.7419
146 G A -0.3464
147 P A 0.2358
148 V A 1.5195
149 T A 0.7470
150 A A 0.6258
151 Q A -0.3413
152 V A 0.6750
153 V A 1.5480
154 L A 0.0000
155 Q A 0.3790
156 A A 0.7672
157 A A 0.2687
158 I A 0.4207
159 Q A -1.3914
160 N A -1.3843
161 A A -0.6126
162 G A 0.1255
163 L A 1.3969
164 C A 1.2705
165 T A 0.9112
166 L A 1.6679
167 V A 2.5302
168 A A 2.2770
169 M A 1.8901
170 L A 1.2584
171 L A 0.9065
172 E A -1.5538
173 E A -1.8754
174 T A -0.2380
175 I A 0.9429
176 F A 1.0605
177 S A 0.8884
178 S A 0.0000
179 A A 0.4227
180 F A 0.5583
181 T A 0.5186
182 I A 0.2604
183 T A -0.6823
184 D A -1.8093
185 Q A -1.1520
186 V A 0.4731
187 P A 0.2274
188 F A 0.3260
189 S A 0.4954
190 V A 0.0987
191 Q A -0.8840
192 L A -0.3611
193 R A -1.2728
194 A A -0.2416
195 L A 0.7164
196 D A -0.8290
197 A A -0.1032
198 W A 0.3410
199 D A -0.5844
200 F A 1.2857
201 G A 0.2265
202 S A 0.0734
203 V A 1.0918
204 G A -0.0613
205 G A 0.2951
206 V A 1.2318
207 F A 1.0373
208 T A 0.7958
209 S A 1.0106
210 V A 1.4838
211 G A 0.0000
212 K A -0.8016
213 A A -0.3820
214 V A 0.2625
215 H A -0.7969
216 Q A -0.9196
217 S A 0.0000
218 P A -0.0493
219 L A 1.1083
220 T A 0.3872
221 G A -0.2990
222 G A -0.2489
223 I A 0.1470
224 L A 0.9616
225 G A 0.0000
226 F A 0.0000
227 V A 0.5093
228 F A 0.5904
229 T A 0.5009
230 L A 0.9444
231 T A 0.9182
232 V A 1.1304
233 P A -0.4334
234 S A -1.6193
235 E A -2.6652
236 R A -2.9321
237 Q A -2.1089
238 L A -0.3351
239 Y A 0.7045
240 P A 0.4843
241 Y A 1.2084
242 D A -0.4466
243 V A 0.9314
244 P A -0.2394
245 D A -1.0274
246 Y A 0.6454
247 A A 0.1707
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Laboratory of Theory of Biopolymers 2018