| Chain sequence(s) |
A: MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGVGILARNLVPMVATVQGQNLKGPVFMCLGGLLTMVAGAVWLVLCCYVLEETSVMLAKRPLIVVTHTYLEPGPVTAQVVLQAAIQNAGLCTLVAMLLEETIFSSAFTITDQVPFSVQLRALDAWDFGSVGGVFTSVGKAVHQSPLTGGILGFVFTLTVPSERQLYPYDVPDYA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:10)
[INFO] Main: Simulation completed successfully. (00:03:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -2.0794 | |
| 2 | Q | A | -2.4601 | |
| 3 | I | A | 0.0000 | |
| 4 | F | A | -0.6943 | |
| 5 | V | A | 0.0000 | |
| 6 | K | A | -0.8122 | |
| 7 | T | A | 0.0000 | |
| 8 | L | A | 0.9571 | |
| 9 | T | A | -0.0147 | |
| 10 | G | A | -0.9994 | |
| 11 | K | A | -1.8265 | |
| 12 | T | A | -0.9616 | |
| 13 | I | A | 0.0000 | |
| 14 | T | A | -1.0519 | |
| 15 | L | A | 0.0000 | |
| 16 | E | A | -2.5240 | |
| 17 | V | A | 0.0000 | |
| 18 | E | A | -2.7780 | |
| 19 | P | A | -1.9382 | |
| 20 | S | A | -1.4897 | |
| 21 | D | A | -1.7372 | |
| 22 | T | A | -2.6868 | |
| 23 | I | A | 0.0000 | |
| 24 | E | A | -3.6955 | |
| 25 | N | A | -2.2682 | |
| 26 | V | A | 0.0000 | |
| 27 | K | A | -2.4314 | |
| 28 | A | A | -2.1413 | |
| 29 | K | A | -2.8374 | |
| 30 | I | A | 0.0000 | |
| 31 | Q | A | -3.0218 | |
| 32 | D | A | -3.6946 | |
| 33 | K | A | -3.7681 | |
| 34 | E | A | -3.2904 | |
| 35 | G | A | -2.4253 | |
| 36 | I | A | -1.6830 | |
| 37 | P | A | -1.4702 | |
| 38 | P | A | -2.1565 | |
| 39 | D | A | -2.5566 | |
| 40 | Q | A | -1.7740 | |
| 41 | Q | A | 0.0000 | |
| 42 | R | A | -1.9519 | |
| 43 | L | A | 0.0000 | |
| 44 | I | A | -1.1498 | |
| 45 | F | A | -0.6171 | |
| 46 | A | A | -0.6321 | |
| 47 | G | A | -1.3413 | |
| 48 | K | A | -2.4206 | |
| 49 | Q | A | -2.6869 | |
| 50 | L | A | 0.0000 | |
| 51 | E | A | -4.0296 | |
| 52 | D | A | -4.3188 | |
| 53 | G | A | -3.0028 | |
| 54 | R | A | -3.3677 | |
| 55 | T | A | -2.7196 | |
| 56 | L | A | 0.0000 | |
| 57 | S | A | -2.1327 | |
| 58 | D | A | -2.3119 | |
| 59 | Y | A | -1.9326 | |
| 60 | N | A | -2.1404 | |
| 61 | I | A | 0.0000 | |
| 62 | Q | A | -2.8434 | |
| 63 | K | A | -3.2327 | |
| 64 | E | A | -2.7151 | |
| 65 | S | A | -1.6864 | |
| 66 | T | A | -0.7724 | |
| 67 | L | A | 0.0000 | |
| 68 | H | A | -0.3397 | |
| 69 | L | A | 0.0000 | |
| 70 | V | A | 0.2356 | |
| 71 | L | A | -0.0334 | |
| 72 | R | A | -0.9589 | |
| 73 | L | A | 0.3973 | |
| 74 | R | A | -1.0449 | |
| 75 | G | A | 0.7754 | |
| 76 | V | A | 2.1725 | |
| 77 | G | A | 0.9946 | |
| 78 | I | A | 2.0107 | |
| 79 | L | A | 2.4284 | |
| 80 | A | A | 1.2518 | |
| 81 | R | A | -0.1795 | |
| 82 | N | A | 0.2049 | |
| 83 | L | A | 2.1509 | |
| 84 | V | A | 2.3747 | |
| 85 | P | A | 1.4682 | |
| 86 | M | A | 2.3181 | |
| 87 | V | A | 2.9005 | |
| 88 | A | A | 1.4108 | |
| 89 | T | A | 0.7481 | |
| 90 | V | A | 0.6113 | |
| 91 | Q | A | -0.9354 | |
| 92 | G | A | -1.3367 | |
| 93 | Q | A | -2.1473 | |
| 94 | N | A | -2.1119 | |
| 95 | L | A | -0.9157 | |
| 96 | K | A | -1.4789 | |
| 97 | G | A | -0.1777 | |
| 98 | P | A | 0.8630 | |
| 99 | V | A | 1.8343 | |
| 100 | F | A | 1.9772 | |
| 101 | M | A | 2.2334 | |
| 102 | C | A | 2.4253 | |
| 103 | L | A | 2.6111 | |
| 104 | G | A | 1.9845 | |
| 105 | G | A | 1.8499 | |
| 106 | L | A | 2.7389 | |
| 107 | L | A | 2.6685 | |
| 108 | T | A | 1.9712 | |
| 109 | M | A | 2.6498 | |
| 110 | V | A | 3.1933 | |
| 111 | A | A | 2.5835 | |
| 112 | G | A | 2.5139 | |
| 113 | A | A | 3.1489 | |
| 114 | V | A | 4.0223 | |
| 115 | W | A | 4.0061 | |
| 116 | L | A | 4.1793 | |
| 117 | V | A | 4.6018 | |
| 118 | L | A | 4.4900 | |
| 119 | C | A | 3.5589 | |
| 120 | C | A | 2.9925 | |
| 121 | Y | A | 2.7420 | |
| 122 | V | A | 2.5048 | |
| 123 | L | A | 1.6903 | |
| 124 | E | A | -0.2850 | |
| 125 | E | A | -0.7560 | |
| 126 | T | A | 0.4840 | |
| 127 | S | A | 0.6638 | |
| 128 | V | A | 1.4165 | |
| 129 | M | A | 0.9765 | |
| 130 | L | A | -0.0010 | |
| 131 | A | A | -0.4548 | |
| 132 | K | A | -2.2598 | |
| 133 | R | A | -2.2770 | |
| 134 | P | A | -0.7342 | |
| 135 | L | A | 0.7639 | |
| 136 | I | A | 1.7083 | |
| 137 | V | A | 2.4864 | |
| 138 | V | A | 1.9050 | |
| 139 | T | A | 0.5894 | |
| 140 | H | A | 0.5613 | |
| 141 | T | A | 0.5755 | |
| 142 | Y | A | 1.8879 | |
| 143 | L | A | 1.4139 | |
| 144 | E | A | -0.7966 | |
| 145 | P | A | -0.7419 | |
| 146 | G | A | -0.3464 | |
| 147 | P | A | 0.2358 | |
| 148 | V | A | 1.5195 | |
| 149 | T | A | 0.7470 | |
| 150 | A | A | 0.6258 | |
| 151 | Q | A | -0.3413 | |
| 152 | V | A | 0.6750 | |
| 153 | V | A | 1.5480 | |
| 154 | L | A | 0.0000 | |
| 155 | Q | A | 0.3790 | |
| 156 | A | A | 0.7672 | |
| 157 | A | A | 0.2687 | |
| 158 | I | A | 0.4207 | |
| 159 | Q | A | -1.3914 | |
| 160 | N | A | -1.3843 | |
| 161 | A | A | -0.6126 | |
| 162 | G | A | 0.1255 | |
| 163 | L | A | 1.3969 | |
| 164 | C | A | 1.2705 | |
| 165 | T | A | 0.9112 | |
| 166 | L | A | 1.6679 | |
| 167 | V | A | 2.5302 | |
| 168 | A | A | 2.2770 | |
| 169 | M | A | 1.8901 | |
| 170 | L | A | 1.2584 | |
| 171 | L | A | 0.9065 | |
| 172 | E | A | -1.5538 | |
| 173 | E | A | -1.8754 | |
| 174 | T | A | -0.2380 | |
| 175 | I | A | 0.9429 | |
| 176 | F | A | 1.0605 | |
| 177 | S | A | 0.8884 | |
| 178 | S | A | 0.0000 | |
| 179 | A | A | 0.4227 | |
| 180 | F | A | 0.5583 | |
| 181 | T | A | 0.5186 | |
| 182 | I | A | 0.2604 | |
| 183 | T | A | -0.6823 | |
| 184 | D | A | -1.8093 | |
| 185 | Q | A | -1.1520 | |
| 186 | V | A | 0.4731 | |
| 187 | P | A | 0.2274 | |
| 188 | F | A | 0.3260 | |
| 189 | S | A | 0.4954 | |
| 190 | V | A | 0.0987 | |
| 191 | Q | A | -0.8840 | |
| 192 | L | A | -0.3611 | |
| 193 | R | A | -1.2728 | |
| 194 | A | A | -0.2416 | |
| 195 | L | A | 0.7164 | |
| 196 | D | A | -0.8290 | |
| 197 | A | A | -0.1032 | |
| 198 | W | A | 0.3410 | |
| 199 | D | A | -0.5844 | |
| 200 | F | A | 1.2857 | |
| 201 | G | A | 0.2265 | |
| 202 | S | A | 0.0734 | |
| 203 | V | A | 1.0918 | |
| 204 | G | A | -0.0613 | |
| 205 | G | A | 0.2951 | |
| 206 | V | A | 1.2318 | |
| 207 | F | A | 1.0373 | |
| 208 | T | A | 0.7958 | |
| 209 | S | A | 1.0106 | |
| 210 | V | A | 1.4838 | |
| 211 | G | A | 0.0000 | |
| 212 | K | A | -0.8016 | |
| 213 | A | A | -0.3820 | |
| 214 | V | A | 0.2625 | |
| 215 | H | A | -0.7969 | |
| 216 | Q | A | -0.9196 | |
| 217 | S | A | 0.0000 | |
| 218 | P | A | -0.0493 | |
| 219 | L | A | 1.1083 | |
| 220 | T | A | 0.3872 | |
| 221 | G | A | -0.2990 | |
| 222 | G | A | -0.2489 | |
| 223 | I | A | 0.1470 | |
| 224 | L | A | 0.9616 | |
| 225 | G | A | 0.0000 | |
| 226 | F | A | 0.0000 | |
| 227 | V | A | 0.5093 | |
| 228 | F | A | 0.5904 | |
| 229 | T | A | 0.5009 | |
| 230 | L | A | 0.9444 | |
| 231 | T | A | 0.9182 | |
| 232 | V | A | 1.1304 | |
| 233 | P | A | -0.4334 | |
| 234 | S | A | -1.6193 | |
| 235 | E | A | -2.6652 | |
| 236 | R | A | -2.9321 | |
| 237 | Q | A | -2.1089 | |
| 238 | L | A | -0.3351 | |
| 239 | Y | A | 0.7045 | |
| 240 | P | A | 0.4843 | |
| 241 | Y | A | 1.2084 | |
| 242 | D | A | -0.4466 | |
| 243 | V | A | 0.9314 | |
| 244 | P | A | -0.2394 | |
| 245 | D | A | -1.0274 | |
| 246 | Y | A | 0.6454 | |
| 247 | A | A | 0.1707 |