Project name: Os08t0411200-01 [mutate: AV244A]

Status: done

Started: 2026-06-18 02:49:47
Settings
Chain sequence(s) A: MWSRCSAGSAVALCGGRGGHRLLSCAAARRRAPGASASAKGIPRSALRASVTPEFVTAAPDEAVEESSVEREPAAENKLRKLACPICYYPLISSSDQSAPVSAASSSSLECSTCKKFYPNRGDYWDMTVAVGSTEYSESTTVTTEVFRTPLVSFLYERGWRQNFIWSGFPGLEREFEMAQTYLKPTTGGIIVDASCGSGLFSRLFVKSELYSLVVALDFSENMLKQCNEYVKQENISDKTLALARADISRLPFVSGSIDAVHAAAAIHCWPSPACAVAEISRVLRPGGVFVASTFVADILPPAVPVLRIGRPYISQFTGSNIFLSEAEFEDLCRACGLIDFKFVRNGFYIMFSATKAS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues AV244A
Energy difference between WT (input) and mutated protein (by FoldX) -3.1165 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:02:49)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:02:52)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:18)
Show buried residues

Minimal score value
-3.7018
Maximal score value
2.5062
Average score
-0.3973
Total score value
-142.2452

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.6217
2 W A 1.3050
3 S A -0.0162
4 R A -1.3905
5 C A -0.2300
6 S A -0.3825
7 A A -0.1835
8 G A -0.4974
9 S A 0.0097
10 A A 0.7295
11 V A 2.1405
12 A A 1.8141
13 L A 2.1888
14 C A 1.1554
15 G A -0.3809
16 G A -1.4055
17 R A -2.4950
18 G A -2.1397
19 G A -1.9270
20 H A -1.5837
21 R A -1.3703
22 L A 1.1232
23 L A 1.7591
24 S A 1.1286
25 C A 1.2982
26 A A 0.3405
27 A A -0.4481
28 A A -1.3966
29 R A -3.1713
30 R A -3.6250
31 R A -3.3171
32 A A -1.7318
33 P A -1.1148
34 G A -0.8311
35 A A -0.3295
36 S A -0.3254
37 A A -0.1705
38 S A -0.5837
39 A A -0.9557
40 K A -1.5581
41 G A -0.3976
42 I A 0.9747
43 P A -0.3156
44 R A -1.6946
45 S A -0.9538
46 A A -0.0622
47 L A 0.6649
48 R A -1.1085
49 A A -0.2484
50 S A 0.2671
51 V A 1.5946
52 T A 0.2638
53 P A -0.3868
54 E A -0.6263
55 F A 1.8536
56 V A 2.2999
57 T A 1.2853
58 A A 0.3529
59 A A -0.4066
60 P A -1.4596
61 D A -2.6359
62 E A -2.5376
63 A A -1.1480
64 V A -0.2773
65 E A -2.1322
66 E A -2.1488
67 S A -1.2534
68 S A -0.9984
69 V A -0.2653
70 E A -2.4759
71 R A -3.2007
72 E A -3.5351
73 P A -2.5955
74 A A -2.1766
75 A A -2.0950
76 E A -2.5515
77 N A -2.7938
78 K A -1.9566
79 L A -1.4042
80 R A -2.3965
81 K A -1.5944
82 L A 0.0000
83 A A 0.0000
84 C A 0.0000
85 P A 0.0000
86 I A 1.8222
87 C A 1.3174
88 Y A 1.4268
89 Y A 1.7710
90 P A 0.2744
91 L A 0.0000
92 I A 0.5039
93 S A -0.3787
94 S A -0.8131
95 S A -1.5058
96 D A -2.4154
97 Q A -2.2602
98 S A -1.0796
99 A A -0.3819
100 P A 0.3777
101 V A 1.5227
102 S A 0.5811
103 A A 0.2915
104 A A 0.0853
105 S A -0.1720
106 S A -0.9193
107 S A -0.7547
108 S A -0.2797
109 L A 0.0000
110 E A -0.6245
111 C A 0.0000
112 S A -0.2566
113 T A -0.3493
114 C A -0.1923
115 K A -1.7083
116 K A -0.4225
117 F A 0.5797
118 Y A 0.0000
119 P A -0.6331
120 N A -1.4867
121 R A -2.5538
122 G A -1.8429
123 D A -2.0167
124 Y A 0.0000
125 W A -0.7010
126 D A 0.0000
127 M A 0.0000
128 T A 0.0000
129 V A 0.7899
130 A A 0.1400
131 V A 0.0000
132 G A -0.3016
133 S A -0.4230
134 T A -0.7850
135 E A -1.3495
136 Y A 0.1154
137 S A -0.2058
138 E A -0.1903
139 S A -0.2310
140 T A -0.0513
141 T A 0.6557
142 V A 1.7886
143 T A 1.0122
144 T A 0.3770
145 E A 0.0227
146 V A 1.0514
147 F A 0.6171
148 R A -0.2665
149 T A 0.3192
150 P A 0.6858
151 L A 2.1504
152 V A 0.0000
153 S A 0.0000
154 F A 1.7201
155 L A 1.0080
156 Y A 0.0000
157 E A -0.7552
158 R A -1.5328
159 G A -1.1893
160 W A -0.4723
161 R A 0.0000
162 Q A -1.0817
163 N A -0.6250
164 F A 0.6664
165 I A 1.5666
166 W A 1.5118
167 S A 0.8821
168 G A 0.3546
169 F A 0.0000
170 P A -0.5824
171 G A -0.9985
172 L A -1.3252
173 E A -3.0186
174 R A -3.2985
175 E A 0.0000
176 F A 0.0000
177 E A -2.8754
178 M A -1.3382
179 A A 0.0000
180 Q A -1.4514
181 T A -1.0193
182 Y A -0.8199
183 L A 0.0000
184 K A -1.8403
185 P A -1.1825
186 T A 0.0000
187 T A -0.9861
188 G A -0.9374
189 G A -0.3748
190 I A 0.0000
191 I A 0.0000
192 V A 0.0000
193 D A 0.0000
194 A A 0.0000
195 S A -0.0579
196 C A 0.0000
197 G A 0.0000
198 S A 0.0000
199 G A 0.0000
200 L A 0.2096
201 F A 0.0000
202 S A 0.0000
203 R A -0.4151
204 L A -0.7590
205 F A 0.0000
206 V A -1.0679
207 K A -2.0395
208 S A -1.4846
209 E A -2.1447
210 L A -1.0513
211 Y A 0.0000
212 S A -0.8210
213 L A 0.0000
214 V A 0.0000
215 V A 0.0000
216 A A 0.0000
217 L A 0.0000
218 D A 0.0000
219 F A -0.1502
220 S A 0.0000
221 E A -1.4980
222 N A -0.8522
223 M A 0.0000
224 L A 0.0000
225 K A -2.5018
226 Q A -1.5912
227 C A 0.0000
228 N A -2.3352
229 E A -3.3680
230 Y A -2.2910
231 V A 0.0000
232 K A -3.7018
233 Q A -3.1133
234 E A -2.5395
235 N A -2.8223
236 I A -2.1419
237 S A -2.0527
238 D A -2.9052
239 K A -2.6139
240 T A -1.8107
241 L A 0.0000
242 A A -0.8693
243 L A 0.0000
244 V A 0.0000 mutated: AV244A
245 R A -0.5623
246 A A 0.0000
247 D A -0.6304
248 I A 0.0000
249 S A -0.6166
250 R A -0.6526
251 L A 0.0000
252 P A 0.0000
253 F A 0.0000
254 V A 0.0205
255 S A -0.1743
256 G A -0.7063
257 S A -0.6592
258 I A 0.0000
259 D A -0.5954
260 A A 0.0000
261 V A 0.0000
262 H A 0.0000
263 A A 0.0000
264 A A 0.0497
265 A A 0.0945
266 A A 0.0000
267 I A 0.0000
268 H A -0.1192
269 C A 0.1586
270 W A 0.0000
271 P A -0.5268
272 S A -0.1757
273 P A -0.0670
274 A A 0.1444
275 C A 0.0096
276 A A 0.0000
277 V A 0.0000
278 A A -0.2677
279 E A 0.0000
280 I A 0.0000
281 S A 0.0000
282 R A -0.5291
283 V A 0.0000
284 L A 0.0000
285 R A -0.8849
286 P A -0.8215
287 G A -0.5313
288 G A 0.0000
289 V A 0.0000
290 F A 0.0000
291 V A 0.0000
292 A A 0.0000
293 S A 0.0000
294 T A 0.0000
295 F A 0.2612
296 V A 0.0000
297 A A 0.9903
298 D A 1.1097
299 I A 2.5062
300 L A 2.0947
301 P A 0.9576
302 P A 0.6231
303 A A 1.0464
304 V A 0.9923
305 P A 0.7452
306 V A 1.9293
307 L A 1.2270
308 R A 0.0884
309 I A 2.0115
310 G A 1.2849
311 R A 0.5235
312 P A 0.4788
313 Y A 1.7006
314 I A 1.2966
315 S A 0.5490
316 Q A 0.3718
317 F A 2.0673
318 T A 1.2778
319 G A 0.8959
320 S A 0.2146
321 N A -0.3915
322 I A -0.0382
323 F A 0.0000
324 L A 0.0000
325 S A -0.3336
326 E A -1.0945
327 A A -1.0024
328 E A -1.3949
329 F A 0.0000
330 E A -2.5344
331 D A -2.7833
332 L A -1.5568
333 C A 0.0000
334 R A -2.6928
335 A A -1.3319
336 C A -0.8287
337 G A -0.9001
338 L A 0.0000
339 I A -0.9968
340 D A -2.0126
341 F A -1.7033
342 K A -1.6234
343 F A -0.1547
344 V A 0.0764
345 R A -0.7480
346 N A -1.4519
347 G A -0.4957
348 F A 0.5497
349 Y A 0.0000
350 I A 0.0000
351 M A 0.0000
352 F A 0.0000
353 S A 0.0000
354 A A 0.0000
355 T A -0.8901
356 K A -0.9594
357 A A -0.4769
358 S A -0.3958
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018