Project name: M-Qmutant [mutate: FE22A, FE62A, LE82A, FE133A, VE167A]

Status: done

Started: 2025-12-13 12:39:08
Settings
Chain sequence(s) A: MGSSLDDFCNDSTAPQKVLLAFSITYTPVMIYALKVSRGRLLGLLHLLIFLNCAFTFGYMTFVHFESTNRVALTMGAVVALLWGVYSAIETWKFITSRCRLCLLGRKYILAPAHHVESAAGFHPIAANDNHAFVVRRPGSTTVQGTLVPGLKSLVLGGRKAVKQGVVNLVKYAK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues LE82A,FE133A,FE22A,VE167A,FE62A
Energy difference between WT (input) and mutated protein (by FoldX) 1.1116 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:01:14)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:02:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:22)
Show buried residues

Minimal score value
-3.372
Maximal score value
2.657
Average score
0.0317
Total score value
5.5208

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.7606
2 G A 0.1133
3 S A -0.3882
4 S A -0.3396
5 L A 0.3244
6 D A -1.7660
7 D A -2.0620
8 F A -0.2935
9 C A -0.3978
10 N A -1.7340
11 D A -1.5219
12 S A -0.7808
13 T A -0.6430
14 A A -0.4788
15 P A -0.1608
16 Q A -0.7595
17 K A -0.7016
18 V A 0.2437
19 L A 0.5515
20 L A 0.0000
21 A A 0.1798
22 E A -0.5718 mutated: FE22A
23 S A 0.0000
24 I A 1.6557
25 T A 1.0543
26 Y A 1.8653
27 T A 1.6773
28 P A 1.8152
29 V A 2.6570
30 M A 0.0000
31 I A 1.8115
32 Y A 2.1220
33 A A 1.3099
34 L A 0.7137
35 K A -0.4707
36 V A 1.0765
37 S A 0.0000
38 R A -1.8761
39 G A -1.5260
40 R A -1.0894
41 L A 0.5751
42 L A 0.2565
43 G A 0.8948
44 L A 2.0866
45 L A 0.0000
46 H A 0.0000
47 L A 2.1694
48 L A 2.1112
49 I A 0.0000
50 F A 2.1506
51 L A 2.3482
52 N A 1.6109
53 C A 1.5224
54 A A 1.4571
55 F A 1.3902
56 T A 1.1216
57 F A 0.6818
58 G A -0.0203
59 Y A 0.0000
60 M A 0.1301
61 T A -0.3975
62 E A -1.4964 mutated: FE62A
63 V A -0.2168
64 H A -0.5702
65 F A -0.4178
66 E A -1.9579
67 S A -1.7696
68 T A -1.1753
69 N A -1.6179
70 R A -1.4567
71 V A 0.8426
72 A A 0.4899
73 L A 0.7288
74 T A 0.9694
75 M A 2.1974
76 G A 1.5621
77 A A 1.7908
78 V A 2.1751
79 V A 2.5339
80 A A 2.0456
81 L A 2.2713
82 E A 0.6367 mutated: LE82A
83 W A 1.4985
84 G A 1.9982
85 V A 2.2968
86 Y A 1.9243
87 S A 0.0000
88 A A 1.5227
89 I A 2.0271
90 E A 0.9571
91 T A 1.7177
92 W A 1.7472
93 K A 0.3193
94 F A 1.2059
95 I A 2.2812
96 T A 0.9926
97 S A 0.4079
98 R A 1.1815
99 C A 1.4464
100 R A 0.3251
101 L A 0.0000
102 C A 0.8996
103 L A 1.4403
104 L A 0.1134
105 G A -0.6233
106 R A -1.8291
107 K A -1.9772
108 Y A 0.0000
109 I A 0.7527
110 L A 1.1182
111 A A 0.0000
112 P A -0.3304
113 A A -0.5048
114 H A -1.3809
115 H A 0.0000
116 V A 0.0000
117 E A 0.0000
118 S A 0.0000
119 A A -0.4039
120 A A -0.0421
121 G A -0.2183
122 F A 0.3540
123 H A -0.3146
124 P A -0.4206
125 I A 0.0000
126 A A -0.7716
127 A A -2.0478
128 N A -2.5801
129 D A -3.3720
130 N A -3.1808
131 H A -2.8053
132 A A -2.0784
133 E A -2.0024 mutated: FE133A
134 V A -0.6650
135 V A -0.6513
136 R A -2.1577
137 R A -1.9733
138 P A -1.4058
139 G A -1.2627
140 S A -0.8707
141 T A 0.0000
142 T A -0.2045
143 V A 0.0000
144 Q A -1.1728
145 G A -0.5662
146 T A 0.3181
147 L A 1.2760
148 V A 0.0000
149 P A -0.2897
150 G A -0.7499
151 L A -0.6845
152 K A -1.6781
153 S A -0.8919
154 L A -0.6219
155 V A 0.0000
156 L A 0.0000
157 G A -2.0072
158 G A 0.0000
159 R A -2.3007
160 K A -1.9051
161 A A -1.1212
162 V A 0.0010
163 K A -1.4863
164 Q A -1.5728
165 G A -1.0768
166 V A 0.0741
167 E A -1.1841 mutated: VE167A
168 N A -0.6958
169 L A 1.1817
170 V A 1.4815
171 K A -0.1119
172 Y A 0.7416
173 A A -0.3785
174 K A -1.5348
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Laboratory of Theory of Biopolymers 2018