| Chain sequence(s) |
A: MAQVQFVESGGGTVQDGDFLRLSCTASGDTFSNYHAGWFRQPPGREREFVAAISWTGEGTLYADSVKGQFTISRDNAKNAMYLQMNRLKPEDTAVYYCAAARSVGFTWRSSKSNDYAYWGQGTQVTV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8400 | |
| 2 | A | A | -0.0855 | |
| 3 | Q | A | -0.9320 | |
| 4 | V | A | -0.3687 | |
| 5 | Q | A | -0.5732 | |
| 6 | F | A | 0.0000 | |
| 7 | V | A | 1.2408 | |
| 8 | E | A | 0.0278 | |
| 9 | S | A | -0.4792 | |
| 10 | G | A | -1.1957 | |
| 11 | G | A | -1.1835 | |
| 12 | G | A | -0.7736 | |
| 13 | T | A | -0.6261 | |
| 14 | V | A | -0.5722 | |
| 15 | Q | A | -2.1313 | |
| 16 | D | A | -3.1706 | |
| 17 | G | A | -2.2082 | |
| 18 | D | A | -1.1827 | |
| 19 | F | A | 0.2184 | |
| 20 | L | A | -0.4381 | |
| 21 | R | A | -1.6579 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.4365 | |
| 24 | C | A | 0.0000 | |
| 25 | T | A | -0.1192 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | -0.7844 | |
| 28 | G | A | -1.5977 | |
| 29 | D | A | -2.5340 | |
| 30 | T | A | 0.0000 | |
| 31 | F | A | 0.0000 | |
| 32 | S | A | -1.6614 | |
| 33 | N | A | -1.7189 | |
| 34 | Y | A | -0.9132 | |
| 35 | H | A | 0.0000 | |
| 36 | A | A | 0.0000 | |
| 37 | G | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -1.9697 | |
| 42 | P | A | 0.0000 | |
| 43 | P | A | -1.6570 | |
| 44 | G | A | -2.0100 | |
| 45 | R | A | -3.3834 | |
| 46 | E | A | -3.4392 | |
| 47 | R | A | -2.4895 | |
| 48 | E | A | -1.8137 | |
| 49 | F | A | -0.9407 | |
| 50 | V | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | W | A | -0.6183 | |
| 56 | T | A | -0.9139 | |
| 57 | G | A | -1.2253 | |
| 58 | E | A | -1.8839 | |
| 59 | G | A | 0.0000 | |
| 60 | T | A | -0.5303 | |
| 61 | L | A | -0.4330 | |
| 62 | Y | A | -0.8770 | |
| 63 | A | A | -1.2889 | |
| 64 | D | A | -2.4028 | |
| 65 | S | A | -1.5887 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.5345 | |
| 68 | G | A | -1.8574 | |
| 69 | Q | A | -1.3555 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.7742 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.6841 | |
| 74 | R | A | -1.1784 | |
| 75 | D | A | -1.7514 | |
| 76 | N | A | -2.1707 | |
| 77 | A | A | -1.6743 | |
| 78 | K | A | -2.4734 | |
| 79 | N | A | -2.0370 | |
| 80 | A | A | 0.0000 | |
| 81 | M | A | 0.0000 | |
| 82 | Y | A | -0.6596 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -0.8103 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.1325 | |
| 87 | R | A | -2.5008 | |
| 88 | L | A | 0.0000 | |
| 89 | K | A | -2.9796 | |
| 90 | P | A | -2.1765 | |
| 91 | E | A | -2.5079 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -1.0314 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | -0.6504 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | -0.2337 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | R | A | -1.2209 | |
| 103 | S | A | 0.0026 | |
| 104 | V | A | 1.2150 | |
| 105 | G | A | 0.7153 | |
| 106 | F | A | 0.9630 | |
| 107 | T | A | -0.0525 | |
| 108 | W | A | -0.2891 | |
| 109 | R | A | -1.6796 | |
| 110 | S | A | -1.3848 | |
| 111 | S | A | -1.5180 | |
| 112 | K | A | -2.5418 | |
| 113 | S | A | -1.7582 | |
| 114 | N | A | -1.9679 | |
| 115 | D | A | -1.3185 | |
| 116 | Y | A | 0.0000 | |
| 117 | A | A | -0.3181 | |
| 118 | Y | A | 0.3445 | |
| 119 | W | A | 0.4325 | |
| 120 | G | A | -0.0400 | |
| 121 | Q | A | -0.8716 | |
| 122 | G | A | -0.6120 | |
| 123 | T | A | 0.0000 | |
| 124 | Q | A | -1.3043 | |
| 125 | V | A | 0.0000 | |
| 126 | T | A | -0.9038 | |
| 127 | V | A | -1.1275 |