| Chain sequence(s) |
H: QIQLVQSGAEVKKPGASVKVSCKASGYTFTKYGMNWVRQAPGQGLEWMGWINTYTGEPTYADDFKGRITFTLDTSTSTAYMELSSLRSEDTAVYFCARDHGKYAMDYWGQGTTVTVSS
L: DFQLTQSPSTLSASVGDRVTITCSASSSVSYMHWFQQKPGTAPKRWIYDTSKLASGVPSRFSGSGSGTEYTLTISSLQPDDFATYYCQQWSFEPPNTFGQGTRLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:02)
[INFO] Main: Simulation completed successfully. (00:02:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3638 | |
| 2 | I | H | -0.5372 | |
| 3 | Q | H | -0.9211 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.2535 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.6024 | |
| 8 | G | H | -0.6118 | |
| 9 | A | H | -0.0234 | |
| 11 | E | H | -0.1151 | |
| 12 | V | H | 0.9249 | |
| 13 | K | H | -0.8893 | |
| 14 | K | H | -2.1589 | |
| 15 | P | H | -2.2703 | |
| 16 | G | H | -1.5935 | |
| 17 | A | H | -1.2266 | |
| 18 | S | H | -1.3252 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.9734 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.5234 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.7536 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7137 | |
| 27 | G | H | -0.8769 | |
| 28 | Y | H | -0.5389 | |
| 29 | T | H | -0.5407 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.3672 | |
| 36 | K | H | -1.4688 | |
| 37 | Y | H | -0.6775 | |
| 38 | G | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6215 | |
| 45 | A | H | -1.0069 | |
| 46 | P | H | -1.0061 | |
| 47 | G | H | -1.2100 | |
| 48 | Q | H | -1.8335 | |
| 49 | G | H | -1.2786 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7996 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | W | H | -0.0707 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.5445 | |
| 58 | T | H | 0.0000 | |
| 59 | Y | H | 0.5890 | |
| 62 | T | H | -0.0718 | |
| 63 | G | H | -0.6729 | |
| 64 | E | H | -1.4350 | |
| 65 | P | H | -0.8521 | |
| 66 | T | H | -0.7684 | |
| 67 | Y | H | -1.0882 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -3.2482 | |
| 70 | D | H | -3.1923 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.0394 | |
| 74 | G | H | -1.9348 | |
| 75 | R | H | -1.5212 | |
| 76 | I | H | 0.0000 | |
| 77 | T | H | -0.8122 | |
| 78 | F | H | 0.0000 | |
| 79 | T | H | -0.4483 | |
| 80 | L | H | -0.0090 | |
| 81 | D | H | -0.4946 | |
| 82 | T | H | -0.1740 | |
| 83 | S | H | -0.3802 | |
| 84 | T | H | -0.4618 | |
| 85 | S | H | -0.5080 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.4357 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.3284 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.1216 | |
| 93 | S | H | -1.2512 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -3.0760 | |
| 96 | S | H | -2.3868 | |
| 97 | E | H | -2.5219 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8843 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.1774 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | H | H | -0.8505 | |
| 109 | G | H | -0.9941 | |
| 110 | K | H | -0.5821 | |
| 113 | Y | H | -0.2488 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.2770 | |
| 117 | Y | H | 0.0661 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0113 | |
| 121 | G | H | -0.4522 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | 0.0258 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2898 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.9532 | |
| 128 | S | H | -0.7800 | |
| 1 | D | L | -1.8504 | |
| 2 | F | L | -0.9663 | |
| 3 | Q | L | -1.7274 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.8399 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.3673 | |
| 8 | P | L | -0.3995 | |
| 9 | S | L | -0.7183 | |
| 10 | T | L | -0.6507 | |
| 11 | L | L | -0.2518 | |
| 12 | S | L | -0.4336 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.1638 | |
| 15 | V | L | 0.6034 | |
| 16 | G | L | -0.6074 | |
| 17 | D | L | -1.6775 | |
| 18 | R | L | -2.2393 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5791 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.5487 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -1.1200 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.0863 | |
| 27 | S | L | -0.6408 | |
| 28 | S | L | -0.4211 | |
| 29 | V | L | 0.0000 | |
| 37 | S | L | 0.0636 | |
| 38 | Y | L | 0.1420 | |
| 39 | M | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -0.9613 | |
| 46 | P | L | -0.6489 | |
| 47 | G | L | -0.7948 | |
| 48 | T | L | -0.8408 | |
| 49 | A | L | -0.7024 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.8794 | |
| 52 | R | L | -0.4769 | |
| 53 | W | L | -0.4561 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.4248 | |
| 56 | D | L | -0.6197 | |
| 57 | T | L | -0.6070 | |
| 65 | S | L | -1.0115 | |
| 66 | K | L | -1.6304 | |
| 67 | L | L | -0.5898 | |
| 68 | A | L | -0.5080 | |
| 69 | S | L | -0.5289 | |
| 70 | G | L | -0.4417 | |
| 71 | V | L | -0.4187 | |
| 72 | P | L | -0.2967 | |
| 74 | S | L | -0.4437 | |
| 75 | R | L | -0.9194 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.6338 | |
| 78 | G | L | -0.6318 | |
| 79 | S | L | -0.9457 | |
| 80 | G | L | -1.0491 | |
| 83 | S | L | -0.9923 | |
| 84 | G | L | -0.9422 | |
| 85 | T | L | -1.1868 | |
| 86 | E | L | -2.0373 | |
| 87 | Y | L | 0.0000 | |
| 88 | T | L | -0.6365 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6169 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.4423 | |
| 93 | S | L | -1.1890 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.7156 | |
| 96 | P | L | -0.7689 | |
| 97 | D | L | -1.8907 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.3682 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.7601 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | W | L | 0.6956 | |
| 108 | S | L | 0.8497 | |
| 109 | F | L | 1.3477 | |
| 113 | E | L | 0.0883 | |
| 114 | P | L | -0.5391 | |
| 115 | P | L | -0.7869 | |
| 116 | N | L | 0.0000 | |
| 117 | T | L | -0.4389 | |
| 118 | F | L | -0.3157 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.4798 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | R | L | -1.3528 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.4073 | |
| 126 | I | L | 1.0609 | |
| 127 | K | L | -0.7305 |