| Chain sequence(s) |
A: IVIVKGHE
C: IVIVKGHE B: IVIVKGHE D: IVIVKGHE input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:42)
[INFO] Main: Simulation completed successfully. (00:02:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 4.9548 | |
| 2 | V | A | 5.1756 | |
| 3 | I | A | 4.1939 | |
| 4 | V | A | 1.5437 | |
| 5 | K | A | -2.2359 | |
| 6 | G | A | -3.4112 | |
| 7 | H | A | -5.2959 | |
| 8 | E | A | -4.9583 | |
| 1 | I | B | 5.0634 | |
| 2 | V | B | 5.1787 | |
| 3 | I | B | 4.5272 | |
| 4 | V | B | 2.1217 | |
| 5 | K | B | -1.7584 | |
| 6 | G | B | 0.0000 | |
| 7 | H | B | -4.9723 | |
| 8 | E | B | -6.5619 | |
| 1 | I | C | 5.6136 | |
| 2 | V | C | 5.0199 | |
| 3 | I | C | 4.4541 | |
| 4 | V | C | 0.8409 | |
| 5 | K | C | -3.3688 | |
| 6 | G | C | -4.1080 | |
| 7 | H | C | -5.2200 | |
| 8 | E | C | -6.3052 | |
| 1 | I | D | 5.6564 | |
| 2 | V | D | 4.8180 | |
| 3 | I | D | 4.5534 | |
| 4 | V | D | 0.0000 | |
| 5 | K | D | -3.4175 | |
| 6 | G | D | 0.0000 | |
| 7 | H | D | 0.0000 | |
| 8 | E | D | -6.4974 |