| Chain sequence(s) |
A: MIIKVLLALSGDALLLSWVGSSGQNRNLLMDGGVTNTYTLSLKREIQTLLKNGEQIDLLILSHIDSDHIGGILRLVNDIQLNRLPDQLIARCWFNSARVLSRYFVDMDLPGKDIVLPHVDKQISIKQGNTFENFLTRLKISSNSLPVLASQKYEVDGLVIDILSPDETGLRKLSKNWPAEINNPGHVPLSGAPTDYHRTILELIHQPFTEDKGIPNGSSIALLATDKTSRILLLADAHPSTIVEALVKKGYSASNPLQVDYVKVSHHGSKHNINNQLLDLIDCRQFIICSNGHNAHGLPHKEALARIIHHNYVRGRRTKLIFNYSNLVTTTLFTPLEMDEYNFCCSYQNQLTVEV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:16)
[INFO] Main: Simulation completed successfully. (00:04:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.0067 | |
| 2 | I | A | 0.2672 | |
| 3 | I | A | 0.0000 | |
| 4 | K | A | -0.4515 | |
| 5 | V | A | 0.0000 | |
| 6 | L | A | 0.0000 | |
| 7 | L | A | 0.0878 | |
| 8 | A | A | 0.0000 | |
| 9 | L | A | 0.1395 | |
| 10 | S | A | -0.1919 | |
| 11 | G | A | 0.0000 | |
| 12 | D | A | 0.0000 | |
| 13 | A | A | 0.0000 | |
| 14 | L | A | 0.0000 | |
| 15 | L | A | 0.0000 | |
| 16 | L | A | 0.0000 | |
| 17 | S | A | -0.0364 | |
| 18 | W | A | 0.0000 | |
| 19 | V | A | 0.5638 | |
| 20 | G | A | 0.0000 | |
| 21 | S | A | -0.6833 | |
| 22 | S | A | -0.9223 | |
| 23 | G | A | -1.0942 | |
| 24 | Q | A | -1.7725 | |
| 25 | N | A | -1.8213 | |
| 26 | R | A | -1.1415 | |
| 27 | N | A | 0.0000 | |
| 28 | L | A | 0.0000 | |
| 29 | L | A | 0.0000 | |
| 30 | M | A | 0.0000 | |
| 31 | D | A | 0.0000 | |
| 32 | G | A | 0.0000 | |
| 33 | G | A | 0.0000 | |
| 34 | V | A | -0.1560 | |
| 35 | T | A | -0.5711 | |
| 36 | N | A | -0.8647 | |
| 37 | T | A | 0.0000 | |
| 38 | Y | A | 0.0000 | |
| 39 | T | A | -0.6737 | |
| 40 | L | A | 0.0494 | |
| 41 | S | A | 0.0000 | |
| 42 | L | A | 0.0000 | |
| 43 | K | A | -1.8348 | |
| 44 | R | A | -2.3798 | |
| 45 | E | A | -1.6993 | |
| 46 | I | A | 0.0000 | |
| 47 | Q | A | -2.3488 | |
| 48 | T | A | -2.0457 | |
| 49 | L | A | 0.0000 | |
| 50 | L | A | -1.8331 | |
| 51 | K | A | -2.6633 | |
| 52 | N | A | -2.6347 | |
| 53 | G | A | -1.9567 | |
| 54 | E | A | -1.8933 | |
| 55 | Q | A | -1.4571 | |
| 56 | I | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | L | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | I | A | 0.0000 | |
| 61 | L | A | 0.0000 | |
| 62 | S | A | 0.0000 | |
| 63 | H | A | 0.0000 | |
| 64 | I | A | -0.1731 | |
| 65 | D | A | -0.8048 | |
| 66 | S | A | -0.4354 | |
| 67 | D | A | -0.3837 | |
| 68 | H | A | 0.0000 | |
| 69 | I | A | 0.0000 | |
| 70 | G | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | L | A | -0.1637 | |
| 74 | R | A | -1.1317 | |
| 75 | L | A | 0.0000 | |
| 76 | V | A | 0.0000 | |
| 77 | N | A | 0.0000 | |
| 78 | D | A | -1.4649 | |
| 79 | I | A | 0.0000 | |
| 80 | Q | A | -1.1143 | |
| 81 | L | A | -0.6927 | |
| 82 | N | A | -2.4298 | |
| 83 | R | A | -2.6695 | |
| 84 | L | A | 0.0000 | |
| 85 | P | A | -2.0564 | |
| 86 | D | A | -3.2816 | |
| 87 | Q | A | -2.3419 | |
| 88 | L | A | 0.0000 | |
| 89 | I | A | 0.0000 | |
| 90 | A | A | -1.2300 | |
| 91 | R | A | -1.1346 | |
| 92 | C | A | 0.0000 | |
| 93 | W | A | -0.0333 | |
| 94 | F | A | 0.0000 | |
| 95 | N | A | 0.0000 | |
| 96 | S | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | R | A | -1.0304 | |
| 99 | V | A | -0.2066 | |
| 100 | L | A | 0.0000 | |
| 101 | S | A | -1.2318 | |
| 102 | R | A | -1.0342 | |
| 103 | Y | A | 0.2234 | |
| 104 | F | A | -0.6580 | |
| 105 | V | A | 0.3553 | |
| 106 | D | A | -1.3077 | |
| 107 | M | A | -1.5295 | |
| 108 | D | A | -1.8676 | |
| 109 | L | A | -1.1128 | |
| 110 | P | A | -1.1744 | |
| 111 | G | A | -1.3501 | |
| 112 | K | A | -1.3735 | |
| 113 | D | A | -0.6839 | |
| 114 | I | A | 0.0000 | |
| 115 | V | A | 0.9031 | |
| 116 | L | A | 0.0000 | |
| 117 | P | A | -0.1201 | |
| 118 | H | A | -0.5795 | |
| 119 | V | A | 0.2492 | |
| 120 | D | A | -1.1890 | |
| 121 | K | A | -2.1028 | |
| 122 | Q | A | -1.0312 | |
| 123 | I | A | 1.1566 | |
| 124 | S | A | 0.2088 | |
| 125 | I | A | 0.9591 | |
| 126 | K | A | -1.0803 | |
| 127 | Q | A | -1.3836 | |
| 128 | G | A | -0.7379 | |
| 129 | N | A | -0.4484 | |
| 130 | T | A | -0.1708 | |
| 131 | F | A | 0.0000 | |
| 132 | E | A | 0.0000 | |
| 133 | N | A | -0.9956 | |
| 134 | F | A | 0.0000 | |
| 135 | L | A | 0.0000 | |
| 136 | T | A | -1.7063 | |
| 137 | R | A | -2.6121 | |
| 138 | L | A | -2.3042 | |
| 139 | K | A | -2.8123 | |
| 140 | I | A | 0.0000 | |
| 141 | S | A | -1.0884 | |
| 142 | S | A | -0.6045 | |
| 143 | N | A | 0.0563 | |
| 144 | S | A | 0.2235 | |
| 145 | L | A | 1.2646 | |
| 146 | P | A | 0.0000 | |
| 147 | V | A | 0.0000 | |
| 148 | L | A | -0.5054 | |
| 149 | A | A | -1.0371 | |
| 150 | S | A | -1.2017 | |
| 151 | Q | A | -1.1324 | |
| 152 | K | A | -2.0690 | |
| 153 | Y | A | -1.4126 | |
| 154 | E | A | -2.0316 | |
| 155 | V | A | 0.0000 | |
| 156 | D | A | -1.1325 | |
| 157 | G | A | -0.9360 | |
| 158 | L | A | 0.0000 | |
| 159 | V | A | -1.0788 | |
| 160 | I | A | 0.0000 | |
| 161 | D | A | -1.0360 | |
| 162 | I | A | 0.0000 | |
| 163 | L | A | 0.0000 | |
| 164 | S | A | 0.0000 | |
| 165 | P | A | 0.0000 | |
| 166 | D | A | -1.7426 | |
| 167 | E | A | -2.5786 | |
| 168 | T | A | -1.9690 | |
| 169 | G | A | -1.6749 | |
| 170 | L | A | 0.0000 | |
| 171 | R | A | -3.2341 | |
| 172 | K | A | -2.8933 | |
| 173 | L | A | 0.0000 | |
| 174 | S | A | 0.0000 | |
| 175 | K | A | -2.8753 | |
| 176 | N | A | -1.7712 | |
| 177 | W | A | 0.0000 | |
| 178 | P | A | -1.3212 | |
| 179 | A | A | -1.3288 | |
| 180 | E | A | -1.4212 | |
| 181 | I | A | -1.1747 | |
| 182 | N | A | -2.1000 | |
| 183 | N | A | -2.3553 | |
| 184 | P | A | -1.5451 | |
| 185 | G | A | -1.2752 | |
| 186 | H | A | -0.4767 | |
| 187 | V | A | 1.2099 | |
| 188 | P | A | 0.7707 | |
| 189 | L | A | 1.5946 | |
| 190 | S | A | 0.3995 | |
| 191 | G | A | -0.4655 | |
| 192 | A | A | -0.4217 | |
| 193 | P | A | -0.5953 | |
| 194 | T | A | -0.7973 | |
| 195 | D | A | -0.6796 | |
| 196 | Y | A | -0.5678 | |
| 197 | H | A | -1.2228 | |
| 198 | R | A | -1.0910 | |
| 199 | T | A | -0.4061 | |
| 200 | I | A | 0.0000 | |
| 201 | L | A | 0.6462 | |
| 202 | E | A | -0.8879 | |
| 203 | L | A | 0.0000 | |
| 204 | I | A | -0.2321 | |
| 205 | H | A | -1.0751 | |
| 206 | Q | A | -1.0046 | |
| 207 | P | A | -0.5470 | |
| 208 | F | A | -0.3107 | |
| 209 | T | A | -0.6781 | |
| 210 | E | A | -1.3448 | |
| 211 | D | A | -1.5690 | |
| 212 | K | A | -2.0237 | |
| 213 | G | A | -1.0462 | |
| 214 | I | A | -0.8674 | |
| 215 | P | A | -0.5774 | |
| 216 | N | A | -0.5261 | |
| 217 | G | A | 0.0000 | |
| 218 | S | A | 0.0000 | |
| 219 | S | A | 0.0000 | |
| 220 | I | A | 0.0000 | |
| 221 | A | A | 0.0000 | |
| 222 | L | A | 0.0000 | |
| 223 | L | A | 0.0000 | |
| 224 | A | A | 0.0000 | |
| 225 | T | A | -0.7529 | |
| 226 | D | A | 0.0000 | |
| 227 | K | A | -1.7843 | |
| 228 | T | A | -1.0462 | |
| 229 | S | A | -1.1065 | |
| 230 | R | A | -1.0197 | |
| 231 | I | A | 0.0000 | |
| 232 | L | A | 0.0000 | |
| 233 | L | A | 0.0000 | |
| 234 | L | A | 0.0000 | |
| 235 | A | A | 0.0000 | |
| 236 | D | A | 0.0000 | |
| 237 | A | A | 0.0000 | |
| 238 | H | A | -0.6841 | |
| 239 | P | A | 0.0000 | |
| 240 | S | A | -0.8691 | |
| 241 | T | A | -0.7712 | |
| 242 | I | A | 0.0000 | |
| 243 | V | A | -0.9318 | |
| 244 | E | A | -1.8819 | |
| 245 | A | A | 0.0000 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | -0.2722 | |
| 248 | K | A | -1.9722 | |
| 249 | K | A | -1.5899 | |
| 250 | G | A | -1.2037 | |
| 251 | Y | A | -0.8897 | |
| 252 | S | A | -0.7153 | |
| 253 | A | A | -0.7381 | |
| 254 | S | A | -0.8999 | |
| 255 | N | A | -1.7802 | |
| 256 | P | A | -1.2880 | |
| 257 | L | A | 0.0000 | |
| 258 | Q | A | -2.0803 | |
| 259 | V | A | 0.0000 | |
| 260 | D | A | -1.7168 | |
| 261 | Y | A | 0.0000 | |
| 262 | V | A | 0.0000 | |
| 263 | K | A | 0.0000 | |
| 264 | V | A | 0.0000 | |
| 265 | S | A | 0.0000 | |
| 266 | H | A | -0.3442 | |
| 267 | H | A | 0.0000 | |
| 268 | G | A | 0.0000 | |
| 269 | S | A | 0.0000 | |
| 270 | K | A | -0.9428 | |
| 271 | H | A | -1.0943 | |
| 272 | N | A | 0.0000 | |
| 273 | I | A | 0.0000 | |
| 274 | N | A | -1.2810 | |
| 275 | N | A | -1.8463 | |
| 276 | Q | A | -1.6824 | |
| 277 | L | A | 0.0000 | |
| 278 | L | A | 0.0000 | |
| 279 | D | A | -1.5506 | |
| 280 | L | A | 0.0000 | |
| 281 | I | A | 0.0000 | |
| 282 | D | A | -2.0443 | |
| 283 | C | A | 0.0000 | |
| 284 | R | A | -3.2049 | |
| 285 | Q | A | -1.6851 | |
| 286 | F | A | 0.0000 | |
| 287 | I | A | 0.0000 | |
| 288 | I | A | 0.0000 | |
| 289 | C | A | 0.0000 | |
| 290 | S | A | 0.0000 | |
| 291 | N | A | -0.2891 | |
| 292 | G | A | 0.0000 | |
| 293 | H | A | -1.2420 | |
| 294 | N | A | -0.9120 | |
| 295 | A | A | -0.5029 | |
| 296 | H | A | -1.0554 | |
| 297 | G | A | 0.0000 | |
| 298 | L | A | 0.0000 | |
| 299 | P | A | 0.0000 | |
| 300 | H | A | -0.4708 | |
| 301 | K | A | 0.0000 | |
| 302 | E | A | 0.0000 | |
| 303 | A | A | 0.0000 | |
| 304 | L | A | 0.0000 | |
| 305 | A | A | 0.0000 | |
| 306 | R | A | -0.5026 | |
| 307 | I | A | 0.0000 | |
| 308 | I | A | 0.0000 | |
| 309 | H | A | -0.4395 | |
| 310 | H | A | -0.9805 | |
| 311 | N | A | -2.0382 | |
| 312 | Y | A | -1.0375 | |
| 313 | V | A | -0.1922 | |
| 314 | R | A | -2.1654 | |
| 315 | G | A | -2.1944 | |
| 316 | R | A | -3.6063 | |
| 317 | R | A | -3.3864 | |
| 318 | T | A | 0.0000 | |
| 319 | K | A | -1.6442 | |
| 320 | L | A | 0.0000 | |
| 321 | I | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | N | A | 0.0000 | |
| 324 | Y | A | -0.5351 | |
| 325 | S | A | -0.4968 | |
| 326 | N | A | 0.2538 | |
| 327 | L | A | 1.4835 | |
| 328 | V | A | 0.7233 | |
| 329 | T | A | 0.0000 | |
| 330 | T | A | 0.4751 | |
| 331 | T | A | 0.2629 | |
| 332 | L | A | 0.0000 | |
| 333 | F | A | 0.0000 | |
| 334 | T | A | -0.1158 | |
| 335 | P | A | -0.2161 | |
| 336 | L | A | 0.1803 | |
| 337 | E | A | -0.5490 | |
| 338 | M | A | -1.0035 | |
| 339 | D | A | -2.3462 | |
| 340 | E | A | -2.3930 | |
| 341 | Y | A | 0.0000 | |
| 342 | N | A | -2.3532 | |
| 343 | F | A | 0.0000 | |
| 344 | C | A | -0.5347 | |
| 345 | C | A | 0.1283 | |
| 346 | S | A | -0.1788 | |
| 347 | Y | A | -0.5762 | |
| 348 | Q | A | -1.5369 | |
| 349 | N | A | -1.7737 | |
| 350 | Q | A | -1.1128 | |
| 351 | L | A | 0.0000 | |
| 352 | T | A | -0.6446 | |
| 353 | V | A | -0.5300 | |
| 354 | E | A | -1.4136 | |
| 355 | V | A | -0.6038 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine