| Chain sequence(s) |
B: LMDEIMKLTEEIKELMKKAVEALKEDPEKAEEYVKEVKEKAKELNALFAK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:17)
[INFO] Main: Simulation completed successfully. (00:02:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.1360 | |
| 2 | M | B | 0.7872 | |
| 3 | D | B | -1.5263 | |
| 4 | E | B | -1.7989 | |
| 5 | I | B | 0.0000 | |
| 6 | M | B | -1.0379 | |
| 7 | K | B | -2.8832 | |
| 8 | L | B | 0.0000 | |
| 9 | T | B | -2.4563 | |
| 10 | E | B | -3.7326 | |
| 11 | E | B | -3.5959 | |
| 12 | I | B | -3.2442 | |
| 13 | K | B | -3.9966 | |
| 14 | E | B | -3.9063 | |
| 15 | L | B | 0.0000 | |
| 16 | M | B | -1.9928 | |
| 17 | K | B | -2.8073 | |
| 18 | K | B | -2.4006 | |
| 19 | A | B | 0.0000 | |
| 20 | V | B | -1.0709 | |
| 21 | E | B | -2.4976 | |
| 22 | A | B | 0.0000 | |
| 23 | L | B | -1.6161 | |
| 24 | K | B | -2.6171 | |
| 25 | E | B | -3.4172 | |
| 26 | D | B | -3.4665 | |
| 27 | P | B | -3.0003 | |
| 28 | E | B | -3.9559 | |
| 29 | K | B | -4.3805 | |
| 30 | A | B | 0.0000 | |
| 31 | E | B | -3.9408 | |
| 32 | E | B | -4.4885 | |
| 33 | Y | B | -3.1549 | |
| 34 | V | B | -2.7767 | |
| 35 | K | B | -4.0496 | |
| 36 | E | B | -4.1043 | |
| 37 | V | B | -3.6410 | |
| 38 | K | B | -4.3190 | |
| 39 | E | B | -4.7829 | |
| 40 | K | B | -3.9342 | |
| 41 | A | B | -3.5309 | |
| 42 | K | B | -4.1724 | |
| 43 | E | B | -3.6597 | |
| 44 | L | B | -2.1508 | |
| 45 | N | B | -2.1756 | |
| 46 | A | B | -1.4516 | |
| 47 | L | B | -0.2659 | |
| 48 | F | B | 1.0110 | |
| 49 | A | B | -0.2680 | |
| 50 | K | B | -0.9847 |