| Chain sequence(s) |
B: DLRAKLDEVMKKLKEFKKEVKEQGTPALEAMKKLIEIAKMKGEALKALEA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:25)
[INFO] Main: Simulation completed successfully. (00:03:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | B | -2.5531 | |
| 2 | L | B | 0.0000 | |
| 3 | R | B | -3.0439 | |
| 4 | A | B | -2.7702 | |
| 5 | K | B | -3.1815 | |
| 6 | L | B | -2.9368 | |
| 7 | D | B | -3.8745 | |
| 8 | E | B | -3.8122 | |
| 9 | V | B | 0.0000 | |
| 10 | M | B | -2.6032 | |
| 11 | K | B | -4.1383 | |
| 12 | K | B | -3.7463 | |
| 13 | L | B | -3.1809 | |
| 14 | K | B | -4.4198 | |
| 15 | E | B | -4.6881 | |
| 16 | F | B | 0.0000 | |
| 17 | K | B | -4.7335 | |
| 18 | K | B | -5.2853 | |
| 19 | E | B | -4.3773 | |
| 20 | V | B | -3.1877 | |
| 21 | K | B | -4.1846 | |
| 22 | E | B | -4.2469 | |
| 23 | Q | B | -3.4165 | |
| 24 | G | B | -2.2382 | |
| 25 | T | B | -1.6336 | |
| 26 | P | B | -0.2550 | |
| 27 | A | B | 0.2756 | |
| 28 | L | B | 0.6686 | |
| 29 | E | B | -0.9452 | |
| 30 | A | B | 0.0000 | |
| 31 | M | B | 0.3620 | |
| 32 | K | B | -1.4240 | |
| 33 | K | B | -1.4619 | |
| 34 | L | B | -0.3868 | |
| 35 | I | B | -0.4797 | |
| 36 | E | B | -1.8178 | |
| 37 | I | B | 0.0000 | |
| 38 | A | B | -1.3815 | |
| 39 | K | B | -2.4375 | |
| 40 | M | B | -2.1539 | |
| 41 | K | B | -2.3496 | |
| 42 | G | B | -2.0377 | |
| 43 | E | B | -2.9184 | |
| 44 | A | B | 0.0000 | |
| 45 | L | B | -1.3299 | |
| 46 | K | B | -2.2980 | |
| 47 | A | B | -1.3619 | |
| 48 | L | B | -0.5415 | |
| 49 | E | B | -1.7840 | |
| 50 | A | B | -0.7562 |