| Chain sequence(s) |
A: VKVCDTCGDAGREDLLAICSRCSDGAEHTYCMRVMLKKVPKGYWLCEECKFA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6292 | |
| 2 | K | A | -0.4568 | |
| 3 | V | A | -0.5898 | |
| 4 | C | A | 0.0000 | |
| 5 | D | A | -2.2411 | |
| 6 | T | A | -1.0439 | |
| 7 | C | A | -0.5826 | |
| 8 | G | A | -1.4480 | |
| 9 | D | A | -2.4869 | |
| 10 | A | A | -1.5564 | |
| 11 | G | A | -2.3156 | |
| 12 | R | A | -3.4421 | |
| 13 | E | A | -3.7212 | |
| 14 | D | A | -3.3471 | |
| 15 | L | A | -2.1940 | |
| 16 | L | A | -1.3045 | |
| 17 | A | A | 0.0000 | |
| 18 | I | A | 0.5377 | |
| 19 | C | A | 0.0000 | |
| 20 | S | A | -0.4598 | |
| 21 | R | A | -2.0092 | |
| 22 | C | A | -1.4192 | |
| 23 | S | A | -1.3166 | |
| 24 | D | A | -2.3589 | |
| 25 | G | A | 0.0000 | |
| 26 | A | A | 0.0000 | |
| 27 | E | A | -0.7446 | |
| 28 | H | A | 0.0000 | |
| 29 | T | A | 0.0000 | |
| 30 | Y | A | 0.5761 | |
| 31 | C | A | 0.4670 | |
| 32 | M | A | 0.1330 | |
| 33 | R | A | -0.6499 | |
| 34 | V | A | 1.3804 | |
| 35 | M | A | 1.1052 | |
| 36 | L | A | -0.0458 | |
| 37 | K | A | -1.7265 | |
| 38 | K | A | -2.4741 | |
| 39 | V | A | -1.3883 | |
| 40 | P | A | -1.0622 | |
| 41 | K | A | -1.8477 | |
| 42 | G | A | -0.5240 | |
| 43 | Y | A | 0.7619 | |
| 44 | W | A | 0.0000 | |
| 45 | L | A | -0.0466 | |
| 46 | C | A | 0.0000 | |
| 47 | E | A | -2.1842 | |
| 48 | E | A | -2.3859 | |
| 49 | C | A | 0.0000 | |
| 50 | K | A | -1.6119 | |
| 51 | F | A | 0.4437 | |
| 52 | A | A | -0.1497 |