| Chain sequence(s) |
A: IPFCDKHLSIGPGPGTAPFTIAMIESLGTQGPGPGPNKIIVINAGQRIAQGPGPGNKIIVINAGQRIAQLKKALQPGLPTPSAIKKNDTSLLGGKSDIHISPQQANISKKNPEQSSSLLTWKDKDGHTGQKKNNQRYYESLPFKQLKKIADVNRQQGIQTSYEMLIGEGPYQATDTQLNFLPKKTVPTSFNLFTDSSEAAAKMLSKDIIKLLNEQVNKEMNSSNLYMSMSSWCYTHSLDGAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFEGLTQIFQKAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEVLFKDILDKIELIGNENHGLYLADQYVKGIAKSRKS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:57)
[INFO] Main: Simulation completed successfully. (00:06:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 1.9467 | |
| 2 | P | A | 0.6283 | |
| 3 | F | A | 1.6885 | |
| 4 | C | A | 0.7063 | |
| 5 | D | A | -1.3442 | |
| 6 | K | A | -1.8774 | |
| 7 | H | A | -1.5499 | |
| 8 | L | A | -0.2948 | |
| 9 | S | A | -0.0235 | |
| 10 | I | A | 0.7221 | |
| 11 | G | A | 0.0021 | |
| 12 | P | A | -0.4792 | |
| 13 | G | A | -0.5914 | |
| 14 | P | A | -0.7576 | |
| 15 | G | A | -0.7322 | |
| 16 | T | A | -0.4981 | |
| 17 | A | A | -0.0868 | |
| 18 | P | A | 0.4213 | |
| 19 | F | A | 1.8391 | |
| 20 | T | A | 1.7576 | |
| 21 | I | A | 2.5285 | |
| 22 | A | A | 1.4406 | |
| 23 | M | A | 0.0000 | |
| 24 | I | A | 2.1681 | |
| 25 | E | A | -0.4777 | |
| 26 | S | A | -0.0221 | |
| 27 | L | A | 0.1342 | |
| 28 | G | A | -0.9195 | |
| 29 | T | A | -1.3490 | |
| 30 | Q | A | -1.8586 | |
| 31 | G | A | -1.3520 | |
| 32 | P | A | -1.0346 | |
| 33 | G | A | -1.3232 | |
| 34 | P | A | -1.0620 | |
| 35 | G | A | -1.3255 | |
| 36 | P | A | -1.8051 | |
| 37 | N | A | -2.8886 | |
| 38 | K | A | -2.6902 | |
| 39 | I | A | -0.6104 | |
| 40 | I | A | 0.8365 | |
| 41 | V | A | 1.5875 | |
| 42 | I | A | 0.0000 | |
| 43 | N | A | 0.0000 | |
| 44 | A | A | -0.5069 | |
| 45 | G | A | -1.1885 | |
| 46 | Q | A | -1.3664 | |
| 47 | R | A | -1.9135 | |
| 48 | I | A | -0.2775 | |
| 49 | A | A | -0.7612 | |
| 50 | Q | A | -1.5030 | |
| 51 | G | A | -1.4099 | |
| 52 | P | A | -1.0351 | |
| 53 | G | A | -1.2411 | |
| 54 | P | A | -1.4500 | |
| 55 | G | A | -2.0630 | |
| 56 | N | A | -2.5047 | |
| 57 | K | A | -2.0380 | |
| 58 | I | A | 0.0874 | |
| 59 | I | A | 1.2631 | |
| 60 | V | A | 0.9900 | |
| 61 | I | A | 0.3739 | |
| 62 | N | A | -0.2623 | |
| 63 | A | A | 0.0121 | |
| 64 | G | A | -0.3534 | |
| 65 | Q | A | -0.6493 | |
| 66 | R | A | -0.3646 | |
| 67 | I | A | -0.1054 | |
| 68 | A | A | -0.6195 | |
| 69 | Q | A | -0.9122 | |
| 70 | L | A | -0.5046 | |
| 71 | K | A | -1.3434 | |
| 72 | K | A | -1.2202 | |
| 73 | A | A | -0.2511 | |
| 74 | L | A | 0.4215 | |
| 75 | Q | A | -0.7591 | |
| 76 | P | A | -0.5264 | |
| 77 | G | A | -0.3939 | |
| 78 | L | A | -0.0715 | |
| 79 | P | A | -0.3237 | |
| 80 | T | A | -0.5809 | |
| 81 | P | A | -0.9614 | |
| 82 | S | A | -1.4883 | |
| 83 | A | A | -1.5445 | |
| 84 | I | A | -1.6377 | |
| 85 | K | A | -3.2140 | |
| 86 | K | A | -3.4448 | |
| 87 | N | A | -3.0568 | |
| 88 | D | A | -3.0662 | |
| 89 | T | A | -2.3205 | |
| 90 | S | A | -2.0883 | |
| 91 | L | A | -2.1555 | |
| 92 | L | A | -1.6878 | |
| 93 | G | A | -1.7040 | |
| 94 | G | A | -1.5445 | |
| 95 | K | A | -1.9556 | |
| 96 | S | A | -1.7594 | |
| 97 | D | A | -1.4081 | |
| 98 | I | A | -0.2040 | |
| 99 | H | A | -0.2076 | |
| 100 | I | A | 0.5821 | |
| 101 | S | A | -0.5333 | |
| 102 | P | A | -1.0774 | |
| 103 | Q | A | -1.9008 | |
| 104 | Q | A | -1.6888 | |
| 105 | A | A | -1.6043 | |
| 106 | N | A | -2.3850 | |
| 107 | I | A | -1.8923 | |
| 108 | S | A | -2.4440 | |
| 109 | K | A | -3.4185 | |
| 110 | K | A | -3.2675 | |
| 111 | N | A | -2.7920 | |
| 112 | P | A | -2.4546 | |
| 113 | E | A | -2.8954 | |
| 114 | Q | A | -2.1220 | |
| 115 | S | A | -1.8682 | |
| 116 | S | A | -1.7994 | |
| 117 | S | A | -0.9374 | |
| 118 | L | A | 0.0192 | |
| 119 | L | A | 0.2131 | |
| 120 | T | A | -0.5071 | |
| 121 | W | A | -0.8030 | |
| 122 | K | A | -2.6919 | |
| 123 | D | A | 0.0000 | |
| 124 | K | A | -3.1731 | |
| 125 | D | A | -3.1379 | |
| 126 | G | A | -2.4960 | |
| 127 | H | A | -2.4431 | |
| 128 | T | A | -2.0171 | |
| 129 | G | A | -1.4664 | |
| 130 | Q | A | -1.5261 | |
| 131 | K | A | -1.9304 | |
| 132 | K | A | -2.4153 | |
| 133 | N | A | -2.3476 | |
| 134 | N | A | -2.1343 | |
| 135 | Q | A | -2.9684 | |
| 136 | R | A | -2.6524 | |
| 137 | Y | A | -1.2715 | |
| 138 | Y | A | -1.3414 | |
| 139 | E | A | -2.0688 | |
| 140 | S | A | -1.0492 | |
| 141 | L | A | 0.0000 | |
| 142 | P | A | -0.2393 | |
| 143 | F | A | 0.5421 | |
| 144 | K | A | -1.4361 | |
| 145 | Q | A | -1.1968 | |
| 146 | L | A | 0.0000 | |
| 147 | K | A | -1.1682 | |
| 148 | K | A | -1.8586 | |
| 149 | I | A | -0.7193 | |
| 150 | A | A | 0.0000 | |
| 151 | D | A | -1.1203 | |
| 152 | V | A | 0.1043 | |
| 153 | N | A | -0.8523 | |
| 154 | R | A | -1.7623 | |
| 155 | Q | A | -1.1616 | |
| 156 | Q | A | -0.9698 | |
| 157 | G | A | -0.7625 | |
| 158 | I | A | -0.5310 | |
| 159 | Q | A | -1.4399 | |
| 160 | T | A | -0.5390 | |
| 161 | S | A | -0.7761 | |
| 162 | Y | A | -0.6850 | |
| 163 | E | A | -1.4211 | |
| 164 | M | A | -0.8923 | |
| 165 | L | A | 0.0000 | |
| 166 | I | A | -1.1395 | |
| 167 | G | A | -2.1525 | |
| 168 | E | A | -2.3903 | |
| 169 | G | A | -1.7357 | |
| 170 | P | A | -1.5129 | |
| 171 | Y | A | 0.0000 | |
| 172 | Q | A | -1.4683 | |
| 173 | A | A | -1.0599 | |
| 174 | T | A | -1.2451 | |
| 175 | D | A | -1.9731 | |
| 176 | T | A | -0.7929 | |
| 177 | Q | A | -0.3444 | |
| 178 | L | A | -0.2787 | |
| 179 | N | A | -0.8742 | |
| 180 | F | A | 0.9394 | |
| 181 | L | A | -0.0813 | |
| 182 | P | A | -1.2136 | |
| 183 | K | A | -2.2966 | |
| 184 | K | A | -2.1757 | |
| 185 | T | A | -0.5808 | |
| 186 | V | A | 0.9101 | |
| 187 | P | A | 0.5554 | |
| 188 | T | A | 0.4704 | |
| 189 | S | A | 0.5325 | |
| 190 | F | A | 1.0634 | |
| 191 | N | A | -0.5366 | |
| 192 | L | A | -0.6930 | |
| 193 | F | A | 0.1677 | |
| 194 | T | A | -0.9954 | |
| 195 | D | A | -2.1517 | |
| 196 | S | A | -1.4485 | |
| 197 | S | A | -2.3529 | |
| 198 | E | A | -2.8203 | |
| 199 | A | A | -1.8845 | |
| 200 | A | A | -1.8317 | |
| 201 | A | A | -2.3008 | |
| 202 | K | A | -2.0829 | |
| 203 | M | A | -0.5588 | |
| 204 | L | A | 0.0000 | |
| 205 | S | A | -1.9904 | |
| 206 | K | A | -2.9735 | |
| 207 | D | A | -3.0268 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | -1.8405 | |
| 210 | K | A | -2.6526 | |
| 211 | L | A | -1.7415 | |
| 212 | L | A | 0.0000 | |
| 213 | N | A | 0.0000 | |
| 214 | E | A | -1.8014 | |
| 215 | Q | A | 0.0000 | |
| 216 | V | A | 0.0000 | |
| 217 | N | A | -0.6424 | |
| 218 | K | A | -1.3021 | |
| 219 | E | A | 0.0000 | |
| 220 | M | A | -0.5315 | |
| 221 | N | A | -0.5725 | |
| 222 | S | A | 0.0000 | |
| 223 | S | A | 0.0000 | |
| 224 | N | A | -0.7554 | |
| 225 | L | A | 0.0000 | |
| 226 | Y | A | 0.0000 | |
| 227 | M | A | 0.4340 | |
| 228 | S | A | -0.4925 | |
| 229 | M | A | 0.0000 | |
| 230 | S | A | 0.0000 | |
| 231 | S | A | 0.2744 | |
| 232 | W | A | -0.5768 | |
| 233 | C | A | 0.0000 | |
| 234 | Y | A | 0.5882 | |
| 235 | T | A | -0.1116 | |
| 236 | H | A | -0.8351 | |
| 237 | S | A | -0.3496 | |
| 238 | L | A | 0.0000 | |
| 239 | D | A | -0.6810 | |
| 240 | G | A | 0.0000 | |
| 241 | A | A | 0.0000 | |
| 242 | G | A | 0.0000 | |
| 243 | L | A | 0.1513 | |
| 244 | F | A | 0.0000 | |
| 245 | L | A | 0.0000 | |
| 246 | F | A | 1.0360 | |
| 247 | D | A | 0.0169 | |
| 248 | H | A | 0.0000 | |
| 249 | A | A | 0.0000 | |
| 250 | A | A | -0.0782 | |
| 251 | E | A | -0.7597 | |
| 252 | E | A | 0.0000 | |
| 253 | Y | A | -0.5612 | |
| 254 | E | A | -1.9703 | |
| 255 | H | A | 0.0000 | |
| 256 | A | A | 0.0000 | |
| 257 | K | A | -1.1736 | |
| 258 | K | A | -0.9765 | |
| 259 | L | A | 0.0000 | |
| 260 | I | A | -0.1298 | |
| 261 | I | A | 0.3064 | |
| 262 | F | A | 0.0000 | |
| 263 | L | A | 0.0000 | |
| 264 | N | A | -1.9645 | |
| 265 | E | A | -2.3630 | |
| 266 | N | A | -2.0667 | |
| 267 | N | A | -2.5370 | |
| 268 | V | A | 0.0000 | |
| 269 | P | A | -0.9663 | |
| 270 | V | A | -0.4230 | |
| 271 | Q | A | -0.8662 | |
| 272 | L | A | 0.4316 | |
| 273 | T | A | -0.0606 | |
| 274 | S | A | 0.2022 | |
| 275 | I | A | 0.1764 | |
| 276 | S | A | -0.3901 | |
| 277 | A | A | -0.6111 | |
| 278 | P | A | -1.3159 | |
| 279 | E | A | -2.4763 | |
| 280 | H | A | -2.5796 | |
| 281 | K | A | -3.0050 | |
| 282 | F | A | 0.0000 | |
| 283 | E | A | -2.4365 | |
| 284 | G | A | -1.6410 | |
| 285 | L | A | 0.0000 | |
| 286 | T | A | -1.6240 | |
| 287 | Q | A | -1.7142 | |
| 288 | I | A | 0.0000 | |
| 289 | F | A | 0.0000 | |
| 290 | Q | A | -1.9209 | |
| 291 | K | A | -1.7843 | |
| 292 | A | A | 0.0000 | |
| 293 | Y | A | -1.6307 | |
| 294 | E | A | -2.7396 | |
| 295 | H | A | -1.7939 | |
| 296 | E | A | 0.0000 | |
| 297 | Q | A | -2.3774 | |
| 298 | H | A | -2.4897 | |
| 299 | I | A | 0.0000 | |
| 300 | S | A | -2.2570 | |
| 301 | E | A | -2.8663 | |
| 302 | S | A | -2.2707 | |
| 303 | I | A | 0.0000 | |
| 304 | N | A | -2.4234 | |
| 305 | N | A | -2.5016 | |
| 306 | I | A | 0.0000 | |
| 307 | V | A | 0.0000 | |
| 308 | D | A | -2.2374 | |
| 309 | H | A | -2.1445 | |
| 310 | A | A | 0.0000 | |
| 311 | I | A | -1.1401 | |
| 312 | K | A | -2.2580 | |
| 313 | S | A | -1.8582 | |
| 314 | K | A | -2.1326 | |
| 315 | D | A | 0.0000 | |
| 316 | H | A | -1.4159 | |
| 317 | A | A | -0.5811 | |
| 318 | T | A | 0.0000 | |
| 319 | F | A | -0.7309 | |
| 320 | N | A | -1.0595 | |
| 321 | F | A | -0.3546 | |
| 322 | L | A | 0.0000 | |
| 323 | Q | A | -0.4341 | |
| 324 | W | A | 0.2190 | |
| 325 | Y | A | 0.0000 | |
| 326 | V | A | -0.7286 | |
| 327 | A | A | -0.7819 | |
| 328 | E | A | -1.3824 | |
| 329 | Q | A | 0.0000 | |
| 330 | H | A | -1.7725 | |
| 331 | E | A | -1.9991 | |
| 332 | E | A | 0.0000 | |
| 333 | E | A | -1.3225 | |
| 334 | V | A | 0.2256 | |
| 335 | L | A | -0.3141 | |
| 336 | F | A | 0.0000 | |
| 337 | K | A | -1.2466 | |
| 338 | D | A | -1.1191 | |
| 339 | I | A | 0.0000 | |
| 340 | L | A | 0.0000 | |
| 341 | D | A | -1.7562 | |
| 342 | K | A | -1.0747 | |
| 343 | I | A | 0.0000 | |
| 344 | E | A | -1.6754 | |
| 345 | L | A | 0.4243 | |
| 346 | I | A | -0.1378 | |
| 347 | G | A | -1.4984 | |
| 348 | N | A | -2.6312 | |
| 349 | E | A | -3.0369 | |
| 350 | N | A | -2.3562 | |
| 351 | H | A | -1.5319 | |
| 352 | G | A | -0.6978 | |
| 353 | L | A | -0.6179 | |
| 354 | Y | A | 0.6707 | |
| 355 | L | A | 1.1673 | |
| 356 | A | A | 0.0000 | |
| 357 | D | A | 0.0000 | |
| 358 | Q | A | -0.2456 | |
| 359 | Y | A | 0.2645 | |
| 360 | V | A | 0.0000 | |
| 361 | K | A | -1.4143 | |
| 362 | G | A | -1.4296 | |
| 363 | I | A | -1.0807 | |
| 364 | A | A | 0.0000 | |
| 365 | K | A | -2.6208 | |
| 366 | S | A | -2.0197 | |
| 367 | R | A | -2.2451 | |
| 368 | K | A | -2.7741 | |
| 369 | S | A | -1.7110 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine