Project name: query_structure

Status: done

Started: 2026-03-16 22:48:05
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAPAVTVVHYVITYGETGASPYYYQKFAVPGSKSTATISGLKPGVDYTITVYAYDGFYYTNNDSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:08)
Show buried residues

Minimal score value
-2.6917
Maximal score value
2.6163
Average score
-0.3416
Total score value
-32.1078

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.8053
2 S A 0.7500
3 S A 0.1589
4 V A -0.1883
5 P A 0.0000
6 T A -1.6871
7 K A -2.6640
8 L A 0.0000
9 E A -1.9415
10 V A 0.0761
11 V A 1.5265
12 A A 0.8924
13 A A 0.3279
14 T A -0.5400
15 P A -1.1842
16 T A -1.0437
17 S A -0.5383
18 L A 0.0000
19 L A 0.7485
20 I A 0.0000
21 S A -0.9849
22 W A 0.0000
23 D A -2.6917
24 A A -1.2550
25 P A 0.0115
26 A A 0.4912
27 V A 0.8997
28 T A 0.3192
29 V A 0.4098
30 V A 1.0950
31 H A 0.0093
32 Y A 0.0000
33 V A 0.0173
34 I A 0.0000
35 T A -0.6676
36 Y A -0.6637
37 G A 0.0000
38 E A -1.5651
39 T A -1.2709
40 G A -0.8667
41 A A -0.1314
42 S A 0.4764
43 P A 0.5533
44 Y A 1.7222
45 Y A 1.3975
46 Y A 0.1210
47 Q A -1.1672
48 K A -1.6383
49 F A -0.4105
50 A A -0.0292
51 V A 0.0000
52 P A -0.4977
53 G A -0.3598
54 S A -0.8869
55 K A -1.9167
56 S A -1.4565
57 T A -0.7545
58 A A 0.0000
59 T A 0.2416
60 I A 0.0000
61 S A -0.6590
62 G A -1.0446
63 L A 0.0000
64 K A -2.4900
65 P A -1.8052
66 G A -1.5606
67 V A -1.6267
68 D A -2.2399
69 Y A 0.0000
70 T A -1.0507
71 I A 0.0000
72 T A -0.2035
73 V A 0.0000
74 Y A -0.0142
75 A A 0.0000
76 Y A 0.8766
77 D A 0.6877
78 G A 1.1870
79 F A 2.6163
80 Y A 2.5732
81 Y A 1.7883
82 T A 0.4881
83 N A -0.7959
84 N A -1.3589
85 D A -2.1102
86 S A -1.1136
87 P A -0.4657
88 I A 0.0872
89 S A -0.5194
90 I A -0.7374
91 N A -1.7873
92 Y A -1.5340
93 R A -2.6294
94 T A -1.7152
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Laboratory of Theory of Biopolymers 2018