| Chain sequence(s) |
A: VSSVPTKLEVVAATPTSLLISWDAPAVTVVHYVITYGETGASPYYYQKFAVPGSKSTATISGLKPGVDYTITVYAYDGFYYTNNDSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.8053 | |
| 2 | S | A | 0.7500 | |
| 3 | S | A | 0.1589 | |
| 4 | V | A | -0.1883 | |
| 5 | P | A | 0.0000 | |
| 6 | T | A | -1.6871 | |
| 7 | K | A | -2.6640 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.9415 | |
| 10 | V | A | 0.0761 | |
| 11 | V | A | 1.5265 | |
| 12 | A | A | 0.8924 | |
| 13 | A | A | 0.3279 | |
| 14 | T | A | -0.5400 | |
| 15 | P | A | -1.1842 | |
| 16 | T | A | -1.0437 | |
| 17 | S | A | -0.5383 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7485 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9849 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.6917 | |
| 24 | A | A | -1.2550 | |
| 25 | P | A | 0.0115 | |
| 26 | A | A | 0.4912 | |
| 27 | V | A | 0.8997 | |
| 28 | T | A | 0.3192 | |
| 29 | V | A | 0.4098 | |
| 30 | V | A | 1.0950 | |
| 31 | H | A | 0.0093 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | 0.0173 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.6676 | |
| 36 | Y | A | -0.6637 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5651 | |
| 39 | T | A | -1.2709 | |
| 40 | G | A | -0.8667 | |
| 41 | A | A | -0.1314 | |
| 42 | S | A | 0.4764 | |
| 43 | P | A | 0.5533 | |
| 44 | Y | A | 1.7222 | |
| 45 | Y | A | 1.3975 | |
| 46 | Y | A | 0.1210 | |
| 47 | Q | A | -1.1672 | |
| 48 | K | A | -1.6383 | |
| 49 | F | A | -0.4105 | |
| 50 | A | A | -0.0292 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -0.4977 | |
| 53 | G | A | -0.3598 | |
| 54 | S | A | -0.8869 | |
| 55 | K | A | -1.9167 | |
| 56 | S | A | -1.4565 | |
| 57 | T | A | -0.7545 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2416 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6590 | |
| 62 | G | A | -1.0446 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.4900 | |
| 65 | P | A | -1.8052 | |
| 66 | G | A | -1.5606 | |
| 67 | V | A | -1.6267 | |
| 68 | D | A | -2.2399 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -1.0507 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | -0.2035 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | -0.0142 | |
| 75 | A | A | 0.0000 | |
| 76 | Y | A | 0.8766 | |
| 77 | D | A | 0.6877 | |
| 78 | G | A | 1.1870 | |
| 79 | F | A | 2.6163 | |
| 80 | Y | A | 2.5732 | |
| 81 | Y | A | 1.7883 | |
| 82 | T | A | 0.4881 | |
| 83 | N | A | -0.7959 | |
| 84 | N | A | -1.3589 | |
| 85 | D | A | -2.1102 | |
| 86 | S | A | -1.1136 | |
| 87 | P | A | -0.4657 | |
| 88 | I | A | 0.0872 | |
| 89 | S | A | -0.5194 | |
| 90 | I | A | -0.7374 | |
| 91 | N | A | -1.7873 | |
| 92 | Y | A | -1.5340 | |
| 93 | R | A | -2.6294 | |
| 94 | T | A | -1.7152 |