| Chain sequence(s) |
H: QVQLVESGGGLVQAGGSLKLSCAASGNIFRSLHMGWYRQAPGKQRELVAIITDTSNTNYADSVKGRFTVSRDNTKNTVYLQMNNLKPEDTAVYYCNARLANIIWGRGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6239 | |
| 2 | V | H | -0.7923 | |
| 3 | Q | H | -1.1793 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.8445 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5270 | |
| 8 | G | H | -1.0456 | |
| 9 | G | H | -0.5450 | |
| 11 | G | H | 0.1206 | |
| 12 | L | H | 1.1756 | |
| 13 | V | H | 0.0867 | |
| 14 | Q | H | -1.3594 | |
| 15 | A | H | -1.7643 | |
| 16 | G | H | -1.9139 | |
| 17 | G | H | -1.3211 | |
| 18 | S | H | -1.5676 | |
| 19 | L | H | -0.8835 | |
| 20 | K | H | -1.6781 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2533 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2493 | |
| 25 | A | H | -0.6983 | |
| 26 | S | H | -1.1809 | |
| 27 | G | H | -1.9137 | |
| 28 | N | H | -2.0141 | |
| 29 | I | H | 0.0000 | |
| 30 | F | H | 0.0000 | |
| 35 | R | H | -2.4303 | |
| 36 | S | H | -0.9752 | |
| 37 | L | H | -0.3759 | |
| 38 | H | H | -0.7115 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | 0.0175 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.5277 | |
| 45 | A | H | -1.6039 | |
| 46 | P | H | -1.2614 | |
| 47 | G | H | -1.7807 | |
| 48 | K | H | -2.9385 | |
| 49 | Q | H | -2.6854 | |
| 50 | R | H | -1.9092 | |
| 51 | E | H | -1.4312 | |
| 52 | L | H | -0.2021 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | I | H | -0.2968 | |
| 56 | I | H | 0.0000 | |
| 57 | T | H | -1.2469 | |
| 58 | D | H | -1.4879 | |
| 59 | T | H | -1.0109 | |
| 63 | S | H | -1.3683 | |
| 64 | N | H | -1.7615 | |
| 65 | T | H | -1.3117 | |
| 66 | N | H | -1.8501 | |
| 67 | Y | H | -1.4518 | |
| 68 | A | H | -1.5718 | |
| 69 | D | H | -2.6891 | |
| 70 | S | H | -1.7722 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.8930 | |
| 74 | G | H | -2.0129 | |
| 75 | R | H | -2.2581 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -1.0536 | |
| 78 | V | H | 0.0000 | |
| 79 | S | H | -0.3008 | |
| 80 | R | H | -1.1825 | |
| 81 | D | H | -1.6350 | |
| 82 | N | H | -2.1675 | |
| 83 | T | H | -1.5249 | |
| 84 | K | H | -2.3024 | |
| 85 | N | H | -2.1348 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.3930 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.2517 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -2.3789 | |
| 93 | N | H | -2.6004 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.8749 | |
| 96 | P | H | -1.9375 | |
| 97 | E | H | -2.3769 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8140 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.2146 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0860 | |
| 104 | C | H | 0.0000 | |
| 105 | N | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | R | H | -0.1315 | |
| 108 | L | H | 0.2986 | |
| 114 | A | H | 0.0918 | |
| 115 | N | H | -0.2842 | |
| 116 | I | H | 1.2398 | |
| 117 | I | H | 0.9149 | |
| 118 | W | H | 0.6027 | |
| 119 | G | H | -0.2804 | |
| 120 | R | H | -1.5200 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | Q | H | -0.7229 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1619 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8054 | |
| 128 | S | H | -0.8709 |