| Chain sequence(s) |
A: SEVDELAERLLARIREYEAETGRRYVGKTTGLALAIVEEVKKHPEKAALAAEAYRRVLLAERPELYGPFADAIAAAIAAGDAAAVAALGAEVDAVREAATGVTYSPEDRARGAAAAAELVKELLS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:57)
[INFO] Main: Simulation completed successfully. (00:03:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -2.1263 | |
| 2 | E | A | -3.0990 | |
| 3 | V | A | -2.8496 | |
| 4 | D | A | -4.1461 | |
| 5 | E | A | -4.3413 | |
| 6 | L | A | 0.0000 | |
| 7 | A | A | 0.0000 | |
| 8 | E | A | -4.0651 | |
| 9 | R | A | -3.6975 | |
| 10 | L | A | 0.0000 | |
| 11 | L | A | -2.1794 | |
| 12 | A | A | -2.5604 | |
| 13 | R | A | -2.8447 | |
| 14 | I | A | 0.0000 | |
| 15 | R | A | -3.6492 | |
| 16 | E | A | -3.5362 | |
| 17 | Y | A | -2.9322 | |
| 18 | E | A | -3.3779 | |
| 19 | A | A | -2.8420 | |
| 20 | E | A | -2.9973 | |
| 21 | T | A | -2.3203 | |
| 22 | G | A | -2.5114 | |
| 23 | R | A | -3.2677 | |
| 24 | R | A | -3.1108 | |
| 25 | Y | A | 0.0000 | |
| 26 | V | A | -1.2883 | |
| 27 | G | A | -0.7943 | |
| 28 | K | A | -0.3629 | |
| 29 | T | A | 0.0000 | |
| 30 | T | A | -0.3028 | |
| 31 | G | A | -0.3761 | |
| 32 | L | A | 0.0000 | |
| 33 | A | A | 0.0000 | |
| 34 | L | A | -0.1351 | |
| 35 | A | A | -0.8717 | |
| 36 | I | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | E | A | -2.8850 | |
| 39 | E | A | 0.0000 | |
| 40 | V | A | 0.0000 | |
| 41 | K | A | -3.7439 | |
| 42 | K | A | -3.5100 | |
| 43 | H | A | -2.8103 | |
| 44 | P | A | -2.5649 | |
| 45 | E | A | -2.5889 | |
| 46 | K | A | -1.7337 | |
| 47 | A | A | -1.3138 | |
| 48 | A | A | -0.4479 | |
| 49 | L | A | -0.7859 | |
| 50 | A | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | E | A | -1.7545 | |
| 53 | A | A | 0.0000 | |
| 54 | Y | A | 0.0000 | |
| 55 | R | A | -1.6670 | |
| 56 | R | A | -1.5955 | |
| 57 | V | A | 0.0000 | |
| 58 | L | A | 0.0000 | |
| 59 | L | A | -0.8419 | |
| 60 | A | A | -0.5258 | |
| 61 | E | A | -1.3709 | |
| 62 | R | A | -2.4961 | |
| 63 | P | A | -1.8489 | |
| 64 | E | A | -2.4382 | |
| 65 | L | A | -1.2054 | |
| 66 | Y | A | 0.0000 | |
| 67 | G | A | -1.3487 | |
| 68 | P | A | -0.8740 | |
| 69 | F | A | 0.0000 | |
| 70 | A | A | 0.0000 | |
| 71 | D | A | -2.0624 | |
| 72 | A | A | -0.9073 | |
| 73 | I | A | 0.0000 | |
| 74 | A | A | -1.1017 | |
| 75 | A | A | -0.7545 | |
| 76 | A | A | 0.0000 | |
| 77 | I | A | 0.0000 | |
| 78 | A | A | -0.6694 | |
| 79 | A | A | -0.5049 | |
| 80 | G | A | -1.5688 | |
| 81 | D | A | -1.3048 | |
| 82 | A | A | -0.8271 | |
| 83 | A | A | -0.0980 | |
| 84 | A | A | -0.0738 | |
| 85 | V | A | 0.0000 | |
| 86 | A | A | -0.0423 | |
| 87 | A | A | -0.1204 | |
| 88 | L | A | -0.2773 | |
| 89 | G | A | 0.0000 | |
| 90 | A | A | -0.6822 | |
| 91 | E | A | -1.6551 | |
| 92 | V | A | 0.0000 | |
| 93 | D | A | -0.9085 | |
| 94 | A | A | -0.9424 | |
| 95 | V | A | -0.4312 | |
| 96 | R | A | 0.0000 | |
| 97 | E | A | -1.5253 | |
| 98 | A | A | -0.6044 | |
| 99 | A | A | -0.2601 | |
| 100 | T | A | -0.4072 | |
| 101 | G | A | -0.6457 | |
| 102 | V | A | 0.2444 | |
| 103 | T | A | -0.2767 | |
| 104 | Y | A | -0.5634 | |
| 105 | S | A | -1.2596 | |
| 106 | P | A | -2.0441 | |
| 107 | E | A | -3.0282 | |
| 108 | D | A | -2.6346 | |
| 109 | R | A | -2.9861 | |
| 110 | A | A | -2.2065 | |
| 111 | R | A | -2.4125 | |
| 112 | G | A | 0.0000 | |
| 113 | A | A | -1.2585 | |
| 114 | A | A | -1.0833 | |
| 115 | A | A | -1.2153 | |
| 116 | A | A | 0.0000 | |
| 117 | A | A | -1.8544 | |
| 118 | E | A | -2.8583 | |
| 119 | L | A | 0.0000 | |
| 120 | V | A | 0.0000 | |
| 121 | K | A | -3.2270 | |
| 122 | E | A | -3.0515 | |
| 123 | L | A | -1.8503 | |
| 124 | L | A | 0.0000 | |
| 125 | S | A | -1.7462 |