| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGSFSSYAMGWFRQAPGKGRELVAYISYSGSSTYTKSSRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAASDGIPGRFEYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:50)
[INFO] Main: Simulation completed successfully. (00:00:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.6091 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.2537 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.2677 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.5168 | |
| 8 | G | A | -1.1239 | |
| 9 | G | A | -0.7656 | |
| 10 | G | A | 0.1268 | |
| 11 | L | A | 1.0158 | |
| 12 | V | A | -0.0375 | |
| 13 | Q | A | -1.3424 | |
| 14 | P | A | -1.7044 | |
| 15 | G | A | -1.5884 | |
| 16 | G | A | -1.1189 | |
| 17 | S | A | -1.5874 | |
| 18 | L | A | -1.1519 | |
| 19 | R | A | -2.3390 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3671 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.0654 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.2171 | |
| 26 | G | A | -1.5922 | |
| 27 | S | A | -1.4101 | |
| 28 | F | A | 0.0000 | |
| 29 | S | A | -0.6916 | |
| 30 | S | A | -0.7567 | |
| 31 | Y | A | 0.0000 | |
| 32 | A | A | 0.0000 | |
| 33 | M | A | 0.0000 | |
| 34 | G | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | F | A | -0.2184 | |
| 37 | R | A | 0.0000 | |
| 38 | Q | A | -2.0129 | |
| 39 | A | A | -1.8469 | |
| 40 | P | A | -1.3356 | |
| 41 | G | A | -1.7883 | |
| 42 | K | A | -2.8595 | |
| 43 | G | A | -2.5537 | |
| 44 | R | A | -2.5985 | |
| 45 | E | A | -1.7251 | |
| 46 | L | A | -0.2712 | |
| 47 | V | A | 0.0000 | |
| 48 | A | A | 0.0000 | |
| 49 | Y | A | 0.6445 | |
| 50 | I | A | 0.0000 | |
| 51 | S | A | 0.1998 | |
| 52 | Y | A | 0.6012 | |
| 53 | S | A | -0.0367 | |
| 54 | G | A | -0.2686 | |
| 55 | S | A | -0.2694 | |
| 56 | S | A | -0.0287 | |
| 57 | T | A | 0.3133 | |
| 58 | Y | A | 0.5193 | |
| 59 | T | A | -0.2664 | |
| 60 | K | A | -1.1976 | |
| 61 | S | A | -0.9328 | |
| 62 | S | A | -0.7451 | |
| 63 | R | A | -1.1770 | |
| 64 | F | A | 0.0000 | |
| 65 | T | A | -0.8274 | |
| 66 | I | A | 0.0000 | |
| 67 | S | A | -0.4751 | |
| 68 | R | A | -0.9498 | |
| 69 | D | A | -1.7849 | |
| 70 | N | A | -1.7257 | |
| 71 | A | A | -1.5401 | |
| 72 | K | A | -2.5054 | |
| 73 | R | A | -2.2417 | |
| 74 | M | A | -1.0660 | |
| 75 | V | A | 0.0000 | |
| 76 | Y | A | -0.6754 | |
| 77 | L | A | 0.0000 | |
| 78 | Q | A | -1.7697 | |
| 79 | M | A | 0.0000 | |
| 80 | N | A | -2.2123 | |
| 81 | S | A | -1.5815 | |
| 82 | L | A | 0.0000 | |
| 83 | R | A | -2.6011 | |
| 84 | A | A | -1.8368 | |
| 85 | E | A | -2.2946 | |
| 86 | D | A | 0.0000 | |
| 87 | T | A | -0.9327 | |
| 88 | A | A | 0.0000 | |
| 89 | V | A | -0.5933 | |
| 90 | Y | A | 0.0000 | |
| 91 | Y | A | -0.0848 | |
| 92 | C | A | 0.0000 | |
| 93 | A | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | S | A | 0.0000 | |
| 96 | D | A | -2.0924 | |
| 97 | G | A | -0.9069 | |
| 98 | I | A | -0.3639 | |
| 99 | P | A | -0.7918 | |
| 100 | G | A | -1.4056 | |
| 101 | R | A | -2.2777 | |
| 102 | F | A | -1.3828 | |
| 103 | E | A | -1.7128 | |
| 104 | Y | A | -1.0366 | |
| 105 | W | A | 0.0935 | |
| 106 | G | A | 0.0000 | |
| 107 | Q | A | -0.6596 | |
| 108 | G | A | -0.4481 | |
| 109 | T | A | -0.6569 | |
| 110 | Q | A | -1.0100 | |
| 111 | V | A | 0.0000 | |
| 112 | T | A | -0.3299 | |
| 113 | V | A | 0.0000 | |
| 114 | S | A | -0.7816 | |
| 115 | S | A | -0.6768 |