| Chain sequence(s) |
A: LPAPKNLVVSEVTEDSLRLSWDDPWAFYESFLIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDTNMRGLPLSAEFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.7921 | |
| 2 | P | A | 0.4634 | |
| 3 | A | A | -0.0190 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.3592 | |
| 6 | N | A | -1.5867 | |
| 7 | L | A | -0.2579 | |
| 8 | V | A | 0.9158 | |
| 9 | V | A | 0.0915 | |
| 10 | S | A | -0.6950 | |
| 11 | E | A | -1.8759 | |
| 12 | V | A | -0.9455 | |
| 13 | T | A | -1.5500 | |
| 14 | E | A | -2.7823 | |
| 15 | D | A | -2.7139 | |
| 16 | S | A | -2.1594 | |
| 17 | L | A | 0.0000 | |
| 18 | R | A | -1.6919 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.7030 | |
| 21 | W | A | 0.0000 | |
| 22 | D | A | -1.9084 | |
| 23 | D | A | 0.0000 | |
| 24 | P | A | -0.0034 | |
| 25 | W | A | 1.3959 | |
| 26 | A | A | 0.6873 | |
| 27 | F | A | 1.1800 | |
| 28 | Y | A | 0.0000 | |
| 29 | E | A | -2.2326 | |
| 30 | S | A | -1.5644 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | -0.3305 | |
| 33 | I | A | 0.0000 | |
| 34 | Q | A | -0.5575 | |
| 35 | Y | A | -0.6295 | |
| 36 | Q | A | -1.5271 | |
| 37 | E | A | -2.1403 | |
| 38 | S | A | -2.1156 | |
| 39 | E | A | -2.3917 | |
| 40 | K | A | -1.9044 | |
| 41 | V | A | 0.0513 | |
| 42 | G | A | -0.9412 | |
| 43 | E | A | -1.9009 | |
| 44 | A | A | -0.9804 | |
| 45 | I | A | -0.4340 | |
| 46 | N | A | -1.0020 | |
| 47 | L | A | -0.0985 | |
| 48 | T | A | -0.1555 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.1681 | |
| 51 | G | A | -1.2554 | |
| 52 | S | A | -1.2919 | |
| 53 | E | A | -1.7359 | |
| 54 | R | A | -1.3166 | |
| 55 | S | A | -1.0071 | |
| 56 | Y | A | -1.0805 | |
| 57 | D | A | -2.1514 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.5034 | |
| 60 | G | A | -1.4839 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.9637 | |
| 63 | P | A | -2.5158 | |
| 64 | G | A | -1.8618 | |
| 65 | T | A | -2.2401 | |
| 66 | E | A | -2.7800 | |
| 67 | Y | A | 0.0000 | |
| 68 | T | A | -1.4631 | |
| 69 | V | A | 0.0000 | |
| 70 | S | A | 0.0000 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | 0.0000 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | -1.1581 | |
| 75 | H | A | -1.3561 | |
| 76 | N | A | -2.3368 | |
| 77 | V | A | -0.5989 | |
| 78 | Y | A | -0.1126 | |
| 79 | K | A | -2.1889 | |
| 80 | D | A | -2.7274 | |
| 81 | T | A | -1.9615 | |
| 82 | N | A | -2.6205 | |
| 83 | M | A | -1.3106 | |
| 84 | R | A | -1.6069 | |
| 85 | G | A | 0.0000 | |
| 86 | L | A | 1.2933 | |
| 87 | P | A | 0.3378 | |
| 88 | L | A | 0.0391 | |
| 89 | S | A | -0.2160 | |
| 90 | A | A | -0.5465 | |
| 91 | E | A | -2.1574 | |
| 92 | F | A | 0.0000 | |
| 93 | T | A | -1.6409 | |
| 94 | T | A | -1.8989 |