Project name: protein 20

Status: done

Started: 2025-07-18 12:08:18
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Chain sequence(s) A: MPNIFQNYFKDGGVRSFNHREWFMAIQDEKLTRLDNGLCAWQYKNVQQDVMLERPTKTQVYKGALSLAEQFNFLALSLLLLLSVVFEMQTGGILRLGSEGGNPDNGDNPHG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:12)
Show buried residues

Minimal score value
-3.4791
Maximal score value
4.5127
Average score
-0.3506
Total score value
-38.9212

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.6236
2 P A -0.6482
3 N A -1.0863
4 I A -0.2311
5 F A -0.2672
6 Q A -1.1200
7 N A -0.6336
8 Y A 0.1407
9 F A -0.8959
10 K A -2.2035
11 D A -2.4267
12 G A -1.5506
13 G A -1.1206
14 V A -0.4900
15 R A -1.4354
16 S A -1.1918
17 F A -1.1692
18 N A -1.8241
19 H A -1.5648
20 R A -2.3297
21 E A -1.5927
22 W A -0.0183
23 F A 0.7948
24 M A -0.2580
25 A A -0.7459
26 I A -0.1557
27 Q A -1.6009
28 D A -2.8418
29 E A -3.4791
30 K A -3.0096
31 L A -1.4075
32 T A -1.2820
33 R A -2.0572
34 L A -1.1441
35 D A -2.4357
36 N A -1.9897
37 G A -1.1067
38 L A 0.4707
39 C A -0.1869
40 A A 0.0298
41 W A 0.0374
42 Q A -1.1533
43 Y A -0.3359
44 K A -1.8306
45 N A -1.6223
46 V A -0.0613
47 Q A -1.6360
48 Q A -1.8089
49 D A -0.9957
50 V A 1.4004
51 M A 1.0945
52 L A 0.9722
53 E A -1.4947
54 R A -2.3552
55 P A -1.7506
56 T A -1.7884
57 K A -1.7483
58 T A -1.0946
59 Q A -1.0913
60 V A 0.5729
61 Y A 0.6151
62 K A -0.8968
63 G A -0.7379
64 A A -0.2358
65 L A -0.0555
66 S A -0.1010
67 L A 1.3524
68 A A 0.6204
69 E A -0.3839
70 Q A 0.8551
71 F A 2.2301
72 N A 0.9556
73 F A 2.8226
74 L A 2.9093
75 A A 2.6382
76 L A 3.4408
77 S A 3.3316
78 L A 4.0061
79 L A 4.5127
80 L A 4.4367
81 L A 4.2912
82 L A 3.7264
83 S A 2.9243
84 V A 2.9428
85 V A 2.6277
86 F A 2.4629
87 E A 0.5492
88 M A 1.0178
89 Q A -0.0881
90 T A 0.2543
91 G A -0.2050
92 G A 0.4021
93 I A 2.0670
94 L A 1.4942
95 R A -0.5323
96 L A 1.0032
97 G A -0.1894
98 S A -1.3732
99 E A -2.5694
100 G A -2.1442
101 G A -2.1660
102 N A -2.6227
103 P A -2.4720
104 D A -3.3556
105 N A -3.3505
106 G A -2.9412
107 D A -3.3335
108 N A -2.8491
109 P A -1.8896
110 H A -1.6154
111 G A -1.1723
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Laboratory of Theory of Biopolymers 2018