| Chain sequence(s) |
L: CPAPEAWLDWGWSSAC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 64 | C | L | 0.6864 | |
| 65 | P | L | -0.1223 | |
| 66 | A | L | -0.0763 | |
| 67 | P | L | -0.5864 | |
| 68 | E | L | -1.8600 | |
| 69 | A | L | -0.1244 | |
| 70 | W | L | 1.2492 | |
| 71 | L | L | 1.3473 | |
| 72 | D | L | -1.2972 | |
| 73 | W | L | 0.7817 | |
| 74 | G | L | 0.1416 | |
| 75 | W | L | 1.1019 | |
| 76 | S | L | 0.0000 | |
| 77 | S | L | -0.2025 | |
| 78 | A | L | 0.1495 | |
| 79 | C | L | 0.7418 |