| Chain sequence(s) |
A: FRAPPVIPNVPFLWAWNAPSEFCLGKFDEPLDMSLFSFIGSPRINATGQGVTIFYVDRLGYYPYIDSITGVTVNGGIPQKISLQDHLDKAKKDITFYMPVDNLGMAVIDWEEWRPTWARNWKPKDVYKNRSIELVQQQNVQLSLTEATEKAKQEFEKAGKDFLVETIKLGKLLRPNHLWGYYLFPDCYNHHYKKPGYNGSCPNVEIKRNDDLSWLWNESTALYPSIYLNTQQSPVAATLYVRNRVREAIRVSKIPDAKSPLPVFAYTRIVFTDQVLKFLSQDELVYTFGETVALGASGIVIWGSWENTRTKESCQAIKEYMDTTLNPYIINVTLAAKMCSQVLCQEQGVCIRKNWNSSDYLHLNPDNFAIQLEKGGKFTVRGKPTLEDLEQFSEKFYCSCYSTLSCKEKADVKDVDAVDVCIADGVCIDAF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:12:11)
[INFO] Main: Simulation completed successfully. (00:12:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.6908 | |
| 2 | R | A | 0.0782 | |
| 3 | A | A | -0.1016 | |
| 4 | P | A | 0.0248 | |
| 5 | P | A | -0.1585 | |
| 6 | V | A | 0.3837 | |
| 7 | I | A | 0.2232 | |
| 8 | P | A | -0.5393 | |
| 9 | N | A | -1.4406 | |
| 10 | V | A | -0.3679 | |
| 11 | P | A | -0.5348 | |
| 12 | F | A | 0.0000 | |
| 13 | L | A | 0.0000 | |
| 14 | W | A | 0.0000 | |
| 15 | A | A | 0.0000 | |
| 16 | W | A | 0.0000 | |
| 17 | N | A | 0.0000 | |
| 18 | A | A | 0.0000 | |
| 19 | P | A | 0.0000 | |
| 20 | S | A | 0.0000 | |
| 21 | E | A | -0.6967 | |
| 22 | F | A | 0.7525 | |
| 23 | C | A | 0.0000 | |
| 24 | L | A | -0.8077 | |
| 25 | G | A | 0.0000 | |
| 26 | K | A | -2.1637 | |
| 27 | F | A | 0.1055 | |
| 28 | D | A | -1.7343 | |
| 29 | E | A | -1.2005 | |
| 30 | P | A | -0.7048 | |
| 31 | L | A | 0.0000 | |
| 32 | D | A | -0.7166 | |
| 33 | M | A | 0.0109 | |
| 34 | S | A | -0.5894 | |
| 35 | L | A | 0.0000 | |
| 36 | F | A | 0.0000 | |
| 37 | S | A | 0.2345 | |
| 38 | F | A | 0.0000 | |
| 39 | I | A | 0.7822 | |
| 40 | G | A | 0.0000 | |
| 41 | S | A | 0.0000 | |
| 42 | P | A | 0.0000 | |
| 43 | R | A | -0.2640 | |
| 44 | I | A | 0.5540 | |
| 45 | N | A | -0.4876 | |
| 46 | A | A | -0.3200 | |
| 47 | T | A | 0.0002 | |
| 48 | G | A | -0.2932 | |
| 49 | Q | A | -0.1742 | |
| 50 | G | A | -0.0429 | |
| 51 | V | A | 0.0000 | |
| 52 | T | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | F | A | 0.0000 | |
| 55 | Y | A | -0.1526 | |
| 56 | V | A | -0.5922 | |
| 57 | D | A | -1.3444 | |
| 58 | R | A | -0.4562 | |
| 59 | L | A | 0.0000 | |
| 60 | G | A | 0.0000 | |
| 61 | Y | A | -0.4262 | |
| 62 | Y | A | 0.0000 | |
| 63 | P | A | 0.0000 | |
| 64 | Y | A | 0.0989 | |
| 65 | I | A | 0.0000 | |
| 66 | D | A | 0.5235 | |
| 67 | S | A | 0.6048 | |
| 68 | I | A | 1.8769 | |
| 69 | T | A | 1.0116 | |
| 70 | G | A | 0.7431 | |
| 71 | V | A | 1.5018 | |
| 72 | T | A | 0.5726 | |
| 73 | V | A | 0.3546 | |
| 74 | N | A | -0.2110 | |
| 75 | G | A | -0.5546 | |
| 76 | G | A | 0.0000 | |
| 77 | I | A | 0.0000 | |
| 78 | P | A | 0.0000 | |
| 79 | Q | A | -1.5099 | |
| 80 | K | A | -1.6731 | |
| 81 | I | A | -0.9638 | |
| 82 | S | A | -1.1153 | |
| 83 | L | A | -1.1891 | |
| 84 | Q | A | -2.1879 | |
| 85 | D | A | -2.6205 | |
| 86 | H | A | 0.0000 | |
| 87 | L | A | -1.9032 | |
| 88 | D | A | -2.6611 | |
| 89 | K | A | -2.2851 | |
| 90 | A | A | 0.0000 | |
| 91 | K | A | -1.9657 | |
| 92 | K | A | -2.1537 | |
| 93 | D | A | -1.2140 | |
| 94 | I | A | 0.0000 | |
| 95 | T | A | -0.0718 | |
| 96 | F | A | 0.8841 | |
| 97 | Y | A | 0.0000 | |
| 98 | M | A | 0.0000 | |
| 99 | P | A | 0.5933 | |
| 100 | V | A | 0.9808 | |
| 101 | D | A | -0.7376 | |
| 102 | N | A | -1.2803 | |
| 103 | L | A | -0.3557 | |
| 104 | G | A | 0.0000 | |
| 105 | M | A | 0.0000 | |
| 106 | A | A | 0.0000 | |
| 107 | V | A | 0.0000 | |
| 108 | I | A | 0.0000 | |
| 109 | D | A | -0.2332 | |
| 110 | W | A | 0.0000 | |
| 111 | E | A | -0.7919 | |
| 112 | E | A | -0.8482 | |
| 113 | W | A | 0.0000 | |
| 114 | R | A | 0.0000 | |
| 115 | P | A | 0.0000 | |
| 116 | T | A | -0.7234 | |
| 117 | W | A | 0.0000 | |
| 118 | A | A | -0.0561 | |
| 119 | R | A | 0.0000 | |
| 120 | N | A | 0.0000 | |
| 121 | W | A | -0.4054 | |
| 122 | K | A | -1.6815 | |
| 123 | P | A | -1.3220 | |
| 124 | K | A | -1.2527 | |
| 125 | D | A | -1.2294 | |
| 126 | V | A | -0.7709 | |
| 127 | Y | A | 0.0000 | |
| 128 | K | A | -1.2664 | |
| 129 | N | A | -1.9192 | |
| 130 | R | A | -1.6090 | |
| 131 | S | A | 0.0000 | |
| 132 | I | A | -1.8676 | |
| 133 | E | A | -2.0520 | |
| 134 | L | A | -1.7312 | |
| 135 | V | A | 0.0000 | |
| 136 | Q | A | -1.4952 | |
| 137 | Q | A | -1.9354 | |
| 138 | Q | A | -1.9411 | |
| 139 | N | A | -1.1642 | |
| 140 | V | A | 0.2826 | |
| 141 | Q | A | -0.7669 | |
| 142 | L | A | -0.5967 | |
| 143 | S | A | 0.0264 | |
| 144 | L | A | 0.4758 | |
| 145 | T | A | -0.7749 | |
| 146 | E | A | -2.4079 | |
| 147 | A | A | 0.0000 | |
| 148 | T | A | -2.2370 | |
| 149 | E | A | -3.4240 | |
| 150 | K | A | -3.3049 | |
| 151 | A | A | 0.0000 | |
| 152 | K | A | -3.0756 | |
| 153 | Q | A | -3.5461 | |
| 154 | E | A | -3.4478 | |
| 155 | F | A | 0.0000 | |
| 156 | E | A | -2.3476 | |
| 157 | K | A | -2.9560 | |
| 158 | A | A | -1.9753 | |
| 159 | G | A | 0.0000 | |
| 160 | K | A | -1.6138 | |
| 161 | D | A | -1.3143 | |
| 162 | F | A | 0.0000 | |
| 163 | L | A | 0.0000 | |
| 164 | V | A | -0.9565 | |
| 165 | E | A | -1.4331 | |
| 166 | T | A | 0.0000 | |
| 167 | I | A | 0.0000 | |
| 168 | K | A | -0.9222 | |
| 169 | L | A | -0.3419 | |
| 170 | G | A | 0.0000 | |
| 171 | K | A | -0.2849 | |
| 172 | L | A | 0.9327 | |
| 173 | L | A | 0.3964 | |
| 174 | R | A | -0.3645 | |
| 175 | P | A | -0.8097 | |
| 176 | N | A | -1.2845 | |
| 177 | H | A | 0.0000 | |
| 178 | L | A | -0.0741 | |
| 179 | W | A | 0.0000 | |
| 180 | G | A | 0.0000 | |
| 181 | Y | A | 0.0000 | |
| 182 | Y | A | 0.0629 | |
| 183 | L | A | 0.0950 | |
| 184 | F | A | 0.0000 | |
| 185 | P | A | 0.0000 | |
| 186 | D | A | 0.0000 | |
| 187 | C | A | 0.0000 | |
| 188 | Y | A | -0.1359 | |
| 189 | N | A | 0.0000 | |
| 190 | H | A | -1.7483 | |
| 191 | H | A | -2.5471 | |
| 192 | Y | A | -2.1427 | |
| 193 | K | A | -3.1926 | |
| 194 | K | A | -3.1857 | |
| 195 | P | A | -1.8884 | |
| 196 | G | A | -1.5679 | |
| 197 | Y | A | -1.6399 | |
| 198 | N | A | -1.3924 | |
| 199 | G | A | 0.0000 | |
| 200 | S | A | -0.9271 | |
| 201 | C | A | -0.5243 | |
| 202 | P | A | -0.4880 | |
| 203 | N | A | -1.1033 | |
| 204 | V | A | -0.0165 | |
| 205 | E | A | 0.0000 | |
| 206 | I | A | -1.0014 | |
| 207 | K | A | -2.1950 | |
| 208 | R | A | -1.6681 | |
| 209 | N | A | 0.0000 | |
| 210 | D | A | -1.6833 | |
| 211 | D | A | -2.4531 | |
| 212 | L | A | 0.0000 | |
| 213 | S | A | -0.9142 | |
| 214 | W | A | -0.6379 | |
| 215 | L | A | 0.0000 | |
| 216 | W | A | 0.0000 | |
| 217 | N | A | -1.4718 | |
| 218 | E | A | -1.1729 | |
| 219 | S | A | 0.0000 | |
| 220 | T | A | -0.3946 | |
| 221 | A | A | 0.0000 | |
| 222 | L | A | 0.0000 | |
| 223 | Y | A | 0.0000 | |
| 224 | P | A | 0.0000 | |
| 225 | S | A | 0.0000 | |
| 226 | I | A | 0.0000 | |
| 227 | Y | A | 0.1942 | |
| 228 | L | A | 0.0000 | |
| 229 | N | A | -0.9801 | |
| 230 | T | A | -1.3940 | |
| 231 | Q | A | -1.7448 | |
| 232 | Q | A | -1.0150 | |
| 233 | S | A | -0.2455 | |
| 234 | P | A | 0.1029 | |
| 235 | V | A | 1.5312 | |
| 236 | A | A | 0.0000 | |
| 237 | A | A | 0.0000 | |
| 238 | T | A | 0.2013 | |
| 239 | L | A | 0.1634 | |
| 240 | Y | A | 0.0000 | |
| 241 | V | A | 0.0000 | |
| 242 | R | A | 0.0000 | |
| 243 | N | A | 0.0000 | |
| 244 | R | A | 0.0000 | |
| 245 | V | A | 0.0000 | |
| 246 | R | A | -0.5993 | |
| 247 | E | A | 0.0000 | |
| 248 | A | A | 0.0000 | |
| 249 | I | A | -0.4192 | |
| 250 | R | A | -0.7466 | |
| 251 | V | A | 0.0000 | |
| 252 | S | A | 0.0000 | |
| 253 | K | A | -1.4402 | |
| 254 | I | A | -0.7847 | |
| 255 | P | A | -1.3142 | |
| 256 | D | A | -2.1086 | |
| 257 | A | A | -1.4657 | |
| 258 | K | A | -1.9172 | |
| 259 | S | A | -1.2698 | |
| 260 | P | A | 0.0000 | |
| 261 | L | A | -0.5826 | |
| 262 | P | A | -0.0253 | |
| 263 | V | A | 0.0000 | |
| 264 | F | A | 0.0000 | |
| 265 | A | A | 0.0000 | |
| 266 | Y | A | 0.0000 | |
| 267 | T | A | 0.0000 | |
| 268 | R | A | 0.0000 | |
| 269 | I | A | 0.0000 | |
| 270 | V | A | 0.0000 | |
| 271 | F | A | 0.0000 | |
| 272 | T | A | -0.7009 | |
| 273 | D | A | -1.5243 | |
| 274 | Q | A | -1.3609 | |
| 275 | V | A | -0.2235 | |
| 276 | L | A | 0.4791 | |
| 277 | K | A | -0.9825 | |
| 278 | F | A | -0.2176 | |
| 279 | L | A | 0.0000 | |
| 280 | S | A | -1.3587 | |
| 281 | Q | A | -1.9280 | |
| 282 | D | A | -2.3919 | |
| 283 | E | A | -1.4147 | |
| 284 | L | A | 0.0000 | |
| 285 | V | A | -0.7475 | |
| 286 | Y | A | -0.2049 | |
| 287 | T | A | 0.0000 | |
| 288 | F | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | E | A | 0.0000 | |
| 291 | T | A | 0.0000 | |
| 292 | V | A | 0.0000 | |
| 293 | A | A | 0.0000 | |
| 294 | L | A | 0.0000 | |
| 295 | G | A | 0.0000 | |
| 296 | A | A | 0.0000 | |
| 297 | S | A | 0.0508 | |
| 298 | G | A | 0.0000 | |
| 299 | I | A | 0.0000 | |
| 300 | V | A | 0.0000 | |
| 301 | I | A | 0.0000 | |
| 302 | W | A | 0.2030 | |
| 303 | G | A | 0.0000 | |
| 304 | S | A | -0.3428 | |
| 305 | W | A | -0.5955 | |
| 306 | E | A | -1.1898 | |
| 307 | N | A | 0.0000 | |
| 308 | T | A | 0.0000 | |
| 309 | R | A | -2.4137 | |
| 310 | T | A | -2.2305 | |
| 311 | K | A | -3.1945 | |
| 312 | E | A | -3.2168 | |
| 313 | S | A | -2.0345 | |
| 314 | C | A | 0.0000 | |
| 315 | Q | A | -2.2612 | |
| 316 | A | A | -1.5107 | |
| 317 | I | A | 0.0000 | |
| 318 | K | A | 0.0000 | |
| 319 | E | A | -2.2440 | |
| 320 | Y | A | 0.0000 | |
| 321 | M | A | 0.0000 | |
| 322 | D | A | -1.1853 | |
| 323 | T | A | -0.8662 | |
| 324 | T | A | 0.0000 | |
| 325 | L | A | 0.0000 | |
| 326 | N | A | 0.0000 | |
| 327 | P | A | -0.2622 | |
| 328 | Y | A | 0.0000 | |
| 329 | I | A | 0.0000 | |
| 330 | I | A | 0.0000 | |
| 331 | N | A | -0.2940 | |
| 332 | V | A | 0.0000 | |
| 333 | T | A | 0.0000 | |
| 334 | L | A | 0.0000 | |
| 335 | A | A | 0.0000 | |
| 336 | A | A | 0.0000 | |
| 337 | K | A | -0.8549 | |
| 338 | M | A | 0.0000 | |
| 339 | C | A | 0.0000 | |
| 340 | S | A | 0.0000 | |
| 341 | Q | A | -1.6028 | |
| 342 | V | A | 0.0000 | |
| 343 | L | A | 0.0000 | |
| 344 | C | A | 0.0000 | |
| 345 | Q | A | -2.4252 | |
| 346 | E | A | -2.6447 | |
| 347 | Q | A | -1.9772 | |
| 348 | G | A | 0.0000 | |
| 349 | V | A | -0.1726 | |
| 350 | C | A | 0.0000 | |
| 351 | I | A | 0.0000 | |
| 352 | R | A | 0.0000 | |
| 353 | K | A | -2.5888 | |
| 354 | N | A | -2.1615 | |
| 355 | W | A | -1.0069 | |
| 356 | N | A | -1.1784 | |
| 357 | S | A | -1.1211 | |
| 358 | S | A | -0.5848 | |
| 359 | D | A | -1.0261 | |
| 360 | Y | A | -0.1085 | |
| 361 | L | A | 0.0000 | |
| 362 | H | A | -0.4481 | |
| 363 | L | A | 0.0000 | |
| 364 | N | A | -1.5520 | |
| 365 | P | A | -1.4788 | |
| 366 | D | A | -2.2556 | |
| 367 | N | A | -2.2569 | |
| 368 | F | A | 0.0000 | |
| 369 | A | A | -1.3633 | |
| 370 | I | A | -0.6321 | |
| 371 | Q | A | -1.5780 | |
| 372 | L | A | -1.3309 | |
| 373 | E | A | -2.7923 | |
| 374 | K | A | -2.9208 | |
| 375 | G | A | -2.0359 | |
| 376 | G | A | -2.0383 | |
| 377 | K | A | -2.3511 | |
| 378 | F | A | 0.0000 | |
| 379 | T | A | 0.0000 | |
| 380 | V | A | 0.0000 | |
| 381 | R | A | -2.6007 | |
| 382 | G | A | -2.7358 | |
| 383 | K | A | -2.4446 | |
| 384 | P | A | 0.0000 | |
| 385 | T | A | -0.9982 | |
| 386 | L | A | -1.7119 | |
| 387 | E | A | -2.6317 | |
| 388 | D | A | 0.0000 | |
| 389 | L | A | 0.0000 | |
| 390 | E | A | -3.6222 | |
| 391 | Q | A | -3.0992 | |
| 392 | F | A | 0.0000 | |
| 393 | S | A | -2.6954 | |
| 394 | E | A | -3.0886 | |
| 395 | K | A | -2.6330 | |
| 396 | F | A | 0.0000 | |
| 397 | Y | A | -0.7043 | |
| 398 | C | A | -0.7083 | |
| 399 | S | A | 0.0000 | |
| 400 | C | A | -0.3636 | |
| 401 | Y | A | 0.0000 | |
| 402 | S | A | 0.0000 | |
| 403 | T | A | -0.0197 | |
| 404 | L | A | 0.3341 | |
| 405 | S | A | -0.3432 | |
| 406 | C | A | 0.0000 | |
| 407 | K | A | -2.5299 | |
| 408 | E | A | -2.5126 | |
| 409 | K | A | -2.5160 | |
| 410 | A | A | -2.3249 | |
| 411 | D | A | -3.2206 | |
| 412 | V | A | 0.0000 | |
| 413 | K | A | -3.6788 | |
| 414 | D | A | -3.4323 | |
| 415 | V | A | -2.0160 | |
| 416 | D | A | -1.9155 | |
| 417 | A | A | -1.0757 | |
| 418 | V | A | 0.0000 | |
| 419 | D | A | -2.1757 | |
| 420 | V | A | 0.0000 | |
| 421 | C | A | -0.6600 | |
| 422 | I | A | -0.0886 | |
| 423 | A | A | -0.7197 | |
| 424 | D | A | -1.9119 | |
| 425 | G | A | -1.1461 | |
| 426 | V | A | 0.0000 | |
| 427 | C | A | -1.0960 | |
| 428 | I | A | 0.0000 | |
| 429 | D | A | -2.6157 | |
| 430 | A | A | -1.1244 | |
| 431 | F | A | 0.6912 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine