Project name: WT_TSA1_pCri8a(42-645)

Status: done

Started: 2025-02-20 19:02:44
Settings
Chain sequence(s) A: MGSSHHHHHHSSGENLYFQGAMAIAMLVPNKTQVVPKSGGEGKVKDIFASPALVRAGGVMIAFVEGRTKNKLFPEVIDLSSSDIVAGYIKAPETWQSLVAEVTKEYWQAHTVLESANNSNHRVGVARLPTGITRGNKVFLLVGSYEERREIDDYIWKAEAWNIKVIEGEATQSTEVQPTQPINWSEPKPLFQTDSPNNKGDLKEFLGGGGSGIVMGNGTLVFPLTAKDESNKVFSLITYSTDDGQKWEIPGGVSSVACRSPRVTEWEEGTLLMVTYCEDGRKVFESRDMGKTWTEAFGTLPGVWLKSGPELPEVSLRVDALITATIEGRKVMLYTQKVRHFLEVDEPNALHLWVTDNNRTFHLGPFSVDCAENKTFANTLLYSDDALHLLQAKGDHESTAVSLARLTEELNTINSVLSTWVQLDASFSESSIPTAGLVGFLSNTTSSGDTWIDGYRCMNATVTKAAKVENGFKFTGPGSRATWPVNSRWDIKQYGFVDYNFTIVAMATIHQVPSESTPLLGASLRGNKRTKLIGLSYGAGGKWETVYDGTKTVQGGTWEPGREYQVALMLQDGNKGFVYVDGVLVGNPAMLPTPEERWTEFSHFYFGGDEGDSGSDATLTDVFLYNR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:08:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:09:00)
Show buried residues

Minimal score value
-3.6162
Maximal score value
1.5358
Average score
-0.783
Total score value
-490.9595

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.7485
2 G A -0.2313
3 S A -0.6607
4 S A -1.1806
5 H A -2.0869
6 H A -2.3975
7 H A -2.6064
8 H A -2.6164
9 H A -2.3854
10 H A -2.0539
11 S A -1.6722
12 S A -1.8772
13 G A -1.6799
14 E A -2.0558
15 N A -1.2865
16 L A 0.5480
17 Y A 0.9738
18 F A 0.0565
19 Q A -0.8187
20 G A -0.5663
21 A A -0.2883
22 M A 0.7706
23 A A 0.5660
24 I A 0.5799
25 A A 0.3214
26 M A 0.0000
27 L A 0.0000
28 V A -0.1888
29 P A -0.9957
30 N A -1.7817
31 K A -2.1449
32 T A 0.0000
33 Q A -1.5080
34 V A 0.0000
35 V A -1.3910
36 P A -1.9087
37 K A -2.2074
38 S A -1.6013
39 G A -1.5934
40 G A -1.9438
41 E A -2.5044
42 G A -1.9343
43 K A -1.7201
44 V A -0.6489
45 K A 0.0000
46 D A -1.0989
47 I A -0.8246
48 F A 0.0000
49 A A 0.0794
50 S A 0.0737
51 P A 0.0000
52 A A 0.0000
53 L A 0.0000
54 V A 0.0000
55 R A -1.0323
56 A A 0.0000
57 G A -1.4340
58 G A -1.0279
59 V A 0.0000
60 M A 0.0000
61 I A 0.0000
62 A A 0.0000
63 F A 0.0000
64 V A 0.0000
65 E A 0.0000
66 G A 0.0000
67 R A -0.5493
68 T A -0.9071
69 K A -1.4961
70 N A -1.6415
71 K A -2.0134
72 L A -0.8349
73 F A 0.0000
74 P A -1.2736
75 E A -1.5032
76 V A 0.1311
77 I A 0.5487
78 D A -1.2772
79 L A 0.0000
80 S A 0.0000
81 S A 0.0000
82 S A 0.0000
83 D A 0.0000
84 I A 0.0000
85 V A 0.0000
86 A A 0.0000
87 G A 0.0000
88 Y A 0.0000
89 I A 0.0000
90 K A -1.4272
91 A A -1.1148
92 P A -1.4354
93 E A -2.1638
94 T A -1.2920
95 W A 0.0000
96 Q A -1.3976
97 S A -1.1629
98 L A 0.0000
99 V A -0.1890
100 A A -0.8741
101 E A -1.0718
102 V A 0.0000
103 T A -1.1006
104 K A -2.1776
105 E A -2.0531
106 Y A -0.3318
107 W A -0.8014
108 Q A -0.9737
109 A A 0.0000
110 H A -0.8796
111 T A -0.9025
112 V A -0.7621
113 L A 0.0000
114 E A -1.8425
115 S A 0.0000
116 A A -1.4089
117 N A -2.4942
118 N A -2.6164
119 S A -2.1695
120 N A -2.3202
121 H A -1.7950
122 R A -2.7351
123 V A 0.0000
124 G A 0.0000
125 V A 0.0000
126 A A 0.0000
127 R A -0.5003
128 L A -0.0273
129 P A 0.0000
130 T A 0.0000
131 G A 0.0000
132 I A 0.0000
133 T A -0.9346
134 R A -1.2493
135 G A -1.4949
136 N A -2.0417
137 K A -2.5220
138 V A 0.0000
139 F A 0.0000
140 L A 0.0000
141 L A 0.0000
142 V A 0.0000
143 G A 0.0000
144 S A -0.5462
145 Y A 0.0000
146 E A -1.5365
147 E A -1.6417
148 R A -1.7611
149 R A -1.1785
150 E A -0.8050
151 I A 0.6499
152 D A -1.4216
153 D A -1.3681
154 Y A 0.6465
155 I A 0.3734
156 W A -0.4282
157 K A -1.4335
158 A A -1.1493
159 E A -1.1788
160 A A -0.5852
161 W A -0.5804
162 N A -0.6431
163 I A 0.0000
164 K A -1.0588
165 V A 0.0000
166 I A 0.0000
167 E A -2.6062
168 G A 0.0000
169 E A -3.0388
170 A A 0.0000
171 T A -1.6539
172 Q A -1.8075
173 S A -1.2959
174 T A -1.0085
175 E A -1.6218
176 V A 0.2830
177 Q A -1.1331
178 P A -1.1915
179 T A -0.8538
180 Q A -1.2076
181 P A 0.0000
182 I A 0.0000
183 N A -2.1845
184 W A -1.8071
185 S A -2.0789
186 E A -2.5343
187 P A -2.0822
188 K A -2.5902
189 P A -1.2117
190 L A 0.0000
191 F A -0.6226
192 Q A -1.9250
193 T A -1.4951
194 D A -2.4131
195 S A -2.0563
196 P A -2.0284
197 N A -2.5105
198 N A -3.2725
199 K A -3.2234
200 G A -3.0528
201 D A -3.6162
202 L A -2.8606
203 K A -3.0577
204 E A -1.6466
205 F A -0.4799
206 L A -0.3452
207 G A 0.0000
208 G A 0.0000
209 G A 0.0000
210 G A 0.0000
211 S A 0.1130
212 G A 0.0000
213 I A 0.4529
214 V A 0.3897
215 M A 0.0000
216 G A -1.6147
217 N A -1.7367
218 G A -0.8673
219 T A 0.0000
220 L A 0.0000
221 V A 0.0000
222 F A 0.0000
223 P A 0.0000
224 L A 0.0000
225 T A -0.4961
226 A A 0.0000
227 K A -2.2433
228 D A -3.1466
229 E A -3.6126
230 S A -2.5426
231 N A -3.0485
232 K A -2.0283
233 V A 0.0000
234 F A -0.1479
235 S A 0.0000
236 L A 0.0000
237 I A 0.0000
238 T A 0.0000
239 Y A -0.3339
240 S A 0.0000
241 T A -1.3033
242 D A -1.6294
243 D A -1.6680
244 G A -1.9598
245 Q A -2.6753
246 K A -2.6802
247 W A -1.5281
248 E A -1.1815
249 I A -0.6571
250 P A 0.0000
251 G A -1.2865
252 G A 0.0000
253 V A 0.5129
254 S A 0.0000
255 S A 0.0153
256 V A 0.5960
257 A A -0.9820
258 C A 0.0000
259 R A -1.7828
260 S A -0.9366
261 P A 0.0000
262 R A -0.3874
263 V A 0.0000
264 T A 0.0000
265 E A -1.0260
266 W A 0.0000
267 E A -3.2248
268 E A -3.4177
269 G A -2.5793
270 T A 0.0000
271 L A 0.0000
272 L A 0.0000
273 M A 0.0000
274 V A 0.0000
275 T A 0.0000
276 Y A -1.3765
277 C A 0.0000
278 E A -3.2755
279 D A -3.3848
280 G A 0.0000
281 R A 0.0000
282 K A -0.7757
283 V A 0.0000
284 F A 0.0000
285 E A -1.0517
286 S A 0.0000
287 R A -2.9224
288 D A -2.0128
289 M A -1.1741
290 G A 0.0000
291 K A -2.0988
292 T A -1.3151
293 W A -0.9410
294 T A -0.6953
295 E A -0.9621
296 A A -0.1998
297 F A 0.7900
298 G A 0.1044
299 T A -0.1311
300 L A 0.0000
301 P A 0.0000
302 G A 0.0000
303 V A 0.0000
304 W A 0.0000
305 L A -1.0299
306 K A -2.3356
307 S A -2.4568
308 G A -1.9146
309 P A -1.3628
310 E A -2.1116
311 L A -1.1859
312 P A -1.0672
313 E A -1.8469
314 V A 0.8776
315 S A 0.1790
316 L A 0.0000
317 R A -0.2617
318 V A 0.0000
319 D A -0.3404
320 A A 0.0000
321 L A 0.0000
322 I A 0.2506
323 T A -0.1076
324 A A 0.0000
325 T A -1.4316
326 I A 0.0000
327 E A -2.5801
328 G A -1.7970
329 R A -1.8198
330 K A -1.9190
331 V A 0.0000
332 M A 0.0000
333 L A 0.0000
334 Y A 0.0000
335 T A 0.0000
336 Q A 0.0000
337 K A -0.1884
338 V A 0.0000
339 R A -0.4450
340 H A -0.1068
341 F A 1.5358
342 L A 1.4654
343 E A -0.5884
344 V A 0.5145
345 D A -1.5175
346 E A -1.0419
347 P A -0.5981
348 N A 0.0000
349 A A 0.0000
350 L A 0.0000
351 H A 0.0000
352 L A 0.0000
353 W A 0.0000
354 V A 0.0000
355 T A 0.0000
356 D A -0.6814
357 N A -0.6330
358 N A -0.6573
359 R A 0.0000
360 T A 0.0000
361 F A -0.1198
362 H A -0.3964
363 L A 0.0000
364 G A 0.0000
365 P A 0.5491
366 F A 0.4886
367 S A 0.0000
368 V A 0.9484
369 D A 0.0000
370 C A -0.8808
371 A A -1.4538
372 E A -2.6906
373 N A -2.2011
374 K A -1.5957
375 T A 0.0000
376 F A 0.4093
377 A A 0.1886
378 N A 0.0000
379 T A 0.0000
380 L A 0.0000
381 L A 0.0029
382 Y A -0.5328
383 S A -1.4066
384 D A -2.6852
385 D A -2.8557
386 A A 0.0000
387 L A 0.0000
388 H A 0.0000
389 L A 0.0000
390 L A 0.0000
391 Q A 0.0000
392 A A 0.0000
393 K A -1.0919
394 G A 0.0000
395 D A -2.8297
396 H A -2.6403
397 E A -2.7446
398 S A -1.8334
399 T A 0.0000
400 A A -0.1282
401 V A 0.0000
402 S A 0.1107
403 L A 0.0000
404 A A 0.0000
405 R A -0.4724
406 L A 0.0000
407 T A -1.5117
408 E A -2.5394
409 E A 0.0000
410 L A 0.0000
411 N A -2.0621
412 T A -1.2623
413 I A 0.0000
414 N A -1.4772
415 S A -0.8362
416 V A 0.0000
417 L A 0.0000
418 S A -0.6819
419 T A -0.3578
420 W A 0.0000
421 V A 0.0456
422 Q A -0.7318
423 L A -0.4427
424 D A -0.5245
425 A A -0.7524
426 S A -0.9422
427 F A 0.0000
428 S A -1.3321
429 E A -2.0590
430 S A -1.1957
431 S A -0.7846
432 I A -0.2329
433 P A -0.3400
434 T A -0.1138
435 A A -0.3575
436 G A -0.7194
437 L A 0.0000
438 V A 0.0000
439 G A 0.0000
440 F A 0.0000
441 L A 0.0000
442 S A -1.3763
443 N A -2.0631
444 T A -1.5721
445 T A -0.8486
446 S A -0.8700
447 S A -0.9002
448 G A -1.5264
449 D A -1.7038
450 T A 0.0000
451 W A 0.0000
452 I A -0.6062
453 D A 0.0000
454 G A -0.5522
455 Y A 0.0000
456 R A -0.8794
457 C A 0.0000
458 M A -0.2599
459 N A -0.5618
460 A A 0.0000
461 T A -0.6687
462 V A 0.0000
463 T A -1.5557
464 K A -2.4584
465 A A -1.8398
466 A A -1.4140
467 K A -2.7417
468 V A -1.9681
469 E A -2.8202
470 N A -2.4529
471 G A 0.0000
472 F A 0.0000
473 K A -1.4979
474 F A 0.0000
475 T A -1.0508
476 G A -1.4608
477 P A -1.8786
478 G A -1.6753
479 S A 0.0000
480 R A -1.9557
481 A A 0.0000
482 T A -0.4186
483 W A 0.0000
484 P A -0.2226
485 V A 0.0000
486 N A 0.0000
487 S A -1.3428
488 R A -1.9549
489 W A -0.8126
490 D A -0.8395
491 I A -0.4833
492 K A -0.6078
493 Q A 0.0000
494 Y A 0.0000
495 G A 0.0000
496 F A 0.0000
497 V A 0.0000
498 D A 0.0000
499 Y A -0.8264
500 N A -1.5475
501 F A 0.0000
502 T A 0.0000
503 I A 0.0000
504 V A 0.0000
505 A A 0.0000
506 M A -0.9875
507 A A 0.0000
508 T A -1.9731
509 I A 0.0000
510 H A -1.6120
511 Q A -1.0540
512 V A 0.1974
513 P A 0.0000
514 S A -1.3230
515 E A -2.3674
516 S A -1.2666
517 T A 0.0000
518 P A -0.7531
519 L A 0.0000
520 L A 0.0000
521 G A 0.0000
522 A A 0.0000
523 S A 0.0000
524 L A 0.0000
525 R A -2.4495
526 G A -2.5486
527 N A -2.8664
528 K A -3.3840
529 R A -3.2762
530 T A -2.3383
531 K A -1.7926
532 L A 0.0000
533 I A 0.0000
534 G A 0.0000
535 L A 0.0000
536 S A 0.0000
537 Y A 0.0000
538 G A 0.0000
539 A A -0.5970
540 G A -0.5985
541 G A -0.6882
542 K A -1.1306
543 W A 0.0000
544 E A 0.0000
545 T A 0.0000
546 V A 0.0000
547 Y A -0.9815
548 D A -1.7278
549 G A -1.8044
550 T A -1.4818
551 K A -1.6552
552 T A -0.1482
553 V A 0.8334
554 Q A -0.2630
555 G A -0.6533
556 G A -0.3633
557 T A -1.0976
558 W A 0.0000
559 E A -2.4545
560 P A -1.9822
561 G A -2.4951
562 R A -3.4015
563 E A -3.3920
564 Y A -2.3677
565 Q A -1.7863
566 V A 0.0000
567 A A 0.0000
568 L A 0.0000
569 M A -0.3269
570 L A 0.0000
571 Q A -2.1549
572 D A -2.6175
573 G A 0.0000
574 N A -1.3103
575 K A -1.4832
576 G A 0.0000
577 F A -0.0879
578 V A 0.0000
579 Y A 0.3989
580 V A 0.0000
581 D A -1.8430
582 G A -0.4479
583 V A 1.1556
584 L A 0.7203
585 V A 0.0000
586 G A -0.3872
587 N A -1.2415
588 P A -0.5945
589 A A -0.3280
590 M A 0.2188
591 L A 0.0000
592 P A -1.0751
593 T A -1.4842
594 P A -1.6603
595 E A -2.5588
596 E A -2.4964
597 R A -1.3709
598 W A -0.4010
599 T A -0.9214
600 E A -1.6846
601 F A 0.0000
602 S A 0.0000
603 H A -0.6285
604 F A 0.0000
605 Y A 0.0000
606 F A 0.0000
607 G A 0.0000
608 G A -1.3819
609 D A 0.0000
610 E A -2.7622
611 G A -2.4209
612 D A -2.8231
613 S A 0.0000
614 G A -1.4222
615 S A 0.0000
616 D A -0.7207
617 A A 0.0000
618 T A -0.7201
619 L A 0.0000
620 T A -1.0478
621 D A -1.0966
622 V A 0.0000
623 F A 0.0000
624 L A 0.0000
625 Y A 0.0000
626 N A -1.1559
627 R A -2.0164
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Laboratory of Theory of Biopolymers 2018