| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIIKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTTPLHEGPDVRVPFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGHPLPAAPPPSPLYVPPPPTSPYAVLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPPLNVYNPADFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9515 | |
| 2 | L | A | 1.9774 | |
| 3 | P | A | 0.6678 | |
| 4 | P | A | 0.3399 | |
| 5 | T | A | 0.0960 | |
| 6 | T | A | 0.1220 | |
| 7 | P | A | 0.1448 | |
| 8 | V | A | 1.2117 | |
| 9 | A | A | 0.0267 | |
| 10 | K | A | -1.1568 | |
| 11 | V | A | -0.4123 | |
| 12 | Q | A | -1.5280 | |
| 13 | S | A | -1.5974 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3949 | |
| 16 | E | A | -2.4269 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4677 | |
| 20 | P | A | 0.1125 | |
| 21 | T | A | 0.1175 | |
| 22 | S | A | -0.1691 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0950 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2801 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8723 | |
| 31 | R | A | -2.6402 | |
| 32 | L | A | -0.7696 | |
| 33 | L | A | 1.2227 | |
| 34 | T | A | 1.4619 | |
| 35 | V | A | 1.9937 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1923 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5820 | |
| 40 | K | A | -1.5086 | |
| 41 | D | A | -0.6659 | |
| 42 | I | A | 1.0332 | |
| 43 | I | A | 1.2895 | |
| 44 | K | A | -1.0547 | |
| 45 | N | A | -1.8744 | |
| 46 | G | A | -1.1730 | |
| 47 | K | A | -0.8528 | |
| 48 | V | A | 1.6236 | |
| 49 | V | A | 2.1532 | |
| 50 | V | A | 1.3948 | |
| 51 | P | A | 0.5949 | |
| 52 | K | A | -0.5499 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1598 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3824 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3080 | |
| 70 | K | A | -1.8219 | |
| 71 | F | A | -0.6767 | |
| 72 | A | A | -0.5709 | |
| 73 | L | A | -0.8526 | |
| 74 | P | A | -1.2545 | |
| 75 | Q | A | -2.4730 | |
| 76 | K | A | -3.0947 | |
| 77 | D | A | -2.9931 | |
| 78 | F | A | -1.6408 | |
| 79 | Y | A | -1.9331 | |
| 80 | D | A | -2.7739 | |
| 81 | P | A | -2.3518 | |
| 82 | E | A | -3.0705 | |
| 83 | K | A | -3.4433 | |
| 84 | E | A | -2.5064 | |
| 85 | R | A | -1.3170 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6153 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9646 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3167 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6723 | |
| 99 | G | A | -0.5382 | |
| 100 | P | A | -0.4292 | |
| 101 | L | A | -0.0003 | |
| 102 | G | A | -0.2269 | |
| 103 | K | A | -0.6782 | |
| 104 | G | A | -0.5668 | |
| 105 | S | A | -0.5944 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.0434 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.1916 | |
| 110 | L | A | 0.1478 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0420 | |
| 113 | K | A | -0.2848 | |
| 114 | L | A | -0.7184 | |
| 115 | G | A | -0.5327 | |
| 116 | D | A | -1.3314 | |
| 117 | T | A | -1.2410 | |
| 118 | E | A | -2.5215 | |
| 119 | N | A | -2.4265 | |
| 120 | P | A | -1.5526 | |
| 121 | T | A | -0.8984 | |
| 122 | T | A | -0.5559 | |
| 123 | P | A | -0.5019 | |
| 124 | L | A | -0.3170 | |
| 125 | H | A | -1.6896 | |
| 126 | E | A | -2.3881 | |
| 127 | G | A | -1.8641 | |
| 128 | P | A | -1.6486 | |
| 129 | D | A | -2.1049 | |
| 130 | V | A | -1.4063 | |
| 131 | R | A | -0.8435 | |
| 132 | V | A | 0.1124 | |
| 133 | P | A | 0.0260 | |
| 134 | F | A | 0.0635 | |
| 135 | S | A | -0.1931 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7877 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2308 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5634 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2450 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1330 | |
| 157 | D | A | 0.3092 | |
| 158 | L | A | 0.7903 | |
| 159 | A | A | 0.1624 | |
| 160 | E | A | -1.4459 | |
| 161 | P | A | -0.1988 | |
| 162 | C | A | 0.2003 | |
| 163 | P | A | -0.1577 | |
| 164 | G | A | -0.0649 | |
| 165 | L | A | 0.6068 | |
| 166 | P | A | -0.1078 | |
| 167 | P | A | -0.3367 | |
| 168 | G | A | -0.4176 | |
| 169 | A | A | -0.0152 | |
| 170 | C | A | 0.6704 | |
| 171 | P | A | 0.5285 | |
| 172 | P | A | 0.7669 | |
| 173 | I | A | 1.9598 | |
| 174 | Q | A | 0.8248 | |
| 175 | L | A | 1.4802 | |
| 176 | V | A | 0.8431 | |
| 177 | N | A | -0.3388 | |
| 178 | S | A | 0.0046 | |
| 179 | V | A | 0.3792 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3692 | |
| 182 | D | A | 0.0750 | |
| 183 | G | A | -0.1591 | |
| 184 | D | A | -0.5673 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1305 | |
| 190 | F | A | 0.0552 | |
| 191 | G | A | -0.1089 | |
| 192 | N | A | -0.2822 | |
| 193 | M | A | -0.1567 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4225 | |
| 197 | E | A | -2.6280 | |
| 198 | L | A | -1.2388 | |
| 199 | Q | A | -2.5511 | |
| 200 | Q | A | -3.3441 | |
| 201 | D | A | -3.6075 | |
| 202 | R | A | -3.3631 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1984 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3880 | |
| 211 | S | A | -1.9136 | |
| 212 | T | A | -1.4861 | |
| 213 | R | A | -2.1726 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1753 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2875 | |
| 220 | L | A | 0.4866 | |
| 221 | K | A | -1.3454 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9769 | |
| 224 | N | A | -1.5896 | |
| 225 | E | A | -1.3339 | |
| 226 | A | A | -0.6812 | |
| 227 | Y | A | -0.4568 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7183 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1416 | |
| 234 | F | A | 0.0398 | |
| 235 | G | A | -0.9448 | |
| 236 | R | A | -2.7284 | |
| 237 | R | A | -3.0788 | |
| 238 | E | A | -2.2155 | |
| 239 | Q | A | -0.2356 | |
| 240 | V | A | 1.5093 | |
| 241 | Y | A | 1.2168 | |
| 242 | A | A | 0.1665 | |
| 243 | R | A | -1.1456 | |
| 244 | H | A | -1.1729 | |
| 245 | F | A | -0.1860 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5644 | |
| 249 | A | A | -1.0581 | |
| 250 | G | A | -1.0570 | |
| 251 | P | A | -1.0973 | |
| 252 | E | A | -1.3886 | |
| 253 | G | A | -1.2878 | |
| 254 | H | A | -1.4300 | |
| 255 | P | A | -0.8671 | |
| 256 | L | A | 0.3358 | |
| 257 | P | A | 0.0974 | |
| 258 | A | A | 0.3868 | |
| 259 | A | A | 0.3400 | |
| 260 | P | A | -0.2127 | |
| 261 | P | A | 0.0351 | |
| 262 | P | A | 0.0582 | |
| 263 | S | A | 0.5604 | |
| 264 | P | A | 0.7029 | |
| 265 | L | A | 1.8749 | |
| 266 | Y | A | 1.6935 | |
| 267 | V | A | 1.9108 | |
| 268 | P | A | 1.0078 | |
| 269 | P | A | 0.7378 | |
| 270 | P | A | -0.0787 | |
| 271 | P | A | -0.0427 | |
| 272 | T | A | -0.1464 | |
| 273 | S | A | 0.3590 | |
| 274 | P | A | 0.6986 | |
| 275 | Y | A | 1.8532 | |
| 276 | A | A | 1.4098 | |
| 277 | V | A | 2.3902 | |
| 278 | L | A | 1.7249 | |
| 279 | P | A | 0.7689 | |
| 280 | S | A | -0.2213 | |
| 281 | T | A | -0.2796 | |
| 282 | D | A | -0.8941 | |
| 283 | Y | A | 0.9081 | |
| 284 | F | A | 0.7185 | |
| 285 | G | A | 0.1385 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9134 | |
| 291 | L | A | 1.6276 | |
| 292 | V | A | 0.6399 | |
| 293 | S | A | -0.1739 | |
| 294 | S | A | -0.9879 | |
| 295 | D | A | -1.8637 | |
| 296 | G | A | -0.9675 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1835 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6481 | |
| 301 | R | A | -1.9078 | |
| 302 | P | A | -1.0031 | |
| 303 | F | A | -0.1855 | |
| 304 | W | A | -0.5141 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0745 | |
| 307 | R | A | -2.9177 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6575 | |
| 310 | G | A | -1.4279 | |
| 311 | N | A | -1.3914 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9105 | |
| 319 | N | A | -0.8858 | |
| 320 | E | A | -1.0491 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3449 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1913 | |
| 333 | N | A | 0.3542 | |
| 334 | F | A | 1.3872 | |
| 335 | T | A | 0.6959 | |
| 336 | I | A | 0.3300 | |
| 337 | S | A | -0.9046 | |
| 338 | Q | A | -1.5267 | |
| 339 | Q | A | -0.7948 | |
| 340 | L | A | 0.6173 | |
| 341 | S | A | 0.2886 | |
| 342 | T | A | 0.0015 | |
| 343 | P | A | -0.3297 | |
| 344 | P | A | -0.2626 | |
| 345 | L | A | 0.4236 | |
| 346 | N | A | -0.0075 | |
| 347 | V | A | 1.7249 | |
| 348 | Y | A | 1.5588 | |
| 349 | N | A | 0.0131 | |
| 350 | P | A | -0.7235 | |
| 351 | A | A | -0.2857 | |
| 352 | D | A | -0.1265 | |
| 353 | F | A | -0.7502 | |
| 354 | K | A | -1.8300 | |
| 355 | N | A | -1.7534 | |
| 356 | Y | A | -0.1734 | |
| 357 | L | A | 0.5404 | |
| 358 | R | A | 0.8823 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4654 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0053 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9175 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6602 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3111 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3281 | |
| 376 | L | A | -1.7567 | |
| 377 | D | A | -2.0393 | |
| 378 | P | A | -1.0668 | |
| 379 | G | A | -1.0222 | |
| 380 | V | A | -0.9311 | |
| 381 | L | A | -0.5433 | |
| 382 | A | A | -0.6589 | |
| 383 | H | A | -0.8451 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3910 | |
| 386 | T | A | -0.5731 | |
| 387 | M | A | -0.3279 | |
| 388 | N | A | -0.8607 | |
| 389 | P | A | -1.2851 | |
| 390 | T | A | -1.5283 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5294 | |
| 393 | E | A | -2.9063 | |
| 394 | N | A | -2.6427 | |
| 395 | W | A | -1.5032 | |
| 396 | N | A | -1.2560 | |
| 397 | L | A | -0.1470 | |
| 398 | G | A | 0.5727 | |
| 399 | F | A | 2.4505 | |
| 400 | V | A | 1.8829 | |
| 401 | P | A | 0.0787 | |
| 402 | P | A | -1.8734 | |
| 403 | K | A | -3.4583 | |
| 404 | E | A | -3.7701 | |
| 405 | R | A | -3.9703 | |
| 406 | E | A | -3.7680 | |
| 407 | D | A | -2.8448 | |
| 408 | P | A | -1.7438 | |
| 409 | Y | A | -0.9893 | |
| 410 | K | A | -2.0919 | |
| 411 | G | A | -0.6365 | |
| 412 | L | A | 0.6631 | |
| 413 | I | A | 1.5731 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4158 | |
| 416 | E | A | -1.7101 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9548 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0824 | |
| 421 | E | A | -2.8003 | |
| 422 | R | A | -2.6682 | |
| 423 | F | A | -1.3114 | |
| 424 | S | A | -1.4725 | |
| 425 | Q | A | -1.9151 | |
| 426 | D | A | -2.9006 | |
| 427 | L | A | -2.0056 | |
| 428 | D | A | -2.8043 | |
| 429 | Q | A | -2.6237 | |
| 430 | F | A | -1.4487 | |
| 431 | A | A | -0.9158 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6217 | |
| 435 | K | A | -0.7576 | |
| 436 | F | A | 0.1425 | |
| 437 | L | A | 1.0184 | |
| 438 | Y | A | 0.8122 | |
| 439 | Q | A | -0.2759 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine