| Chain sequence(s) |
A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
C: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA B: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA E: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA D: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA G: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA F: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA I: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA H: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA K: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA J: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA L: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:18:18)
[INFO] Main: Simulation completed successfully. (00:18:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.9097 | |
| 2 | A | A | -1.3118 | |
| 3 | E | A | -2.0026 | |
| 4 | F | A | -0.5708 | |
| 5 | R | A | -2.5655 | |
| 6 | H | A | -2.5173 | |
| 7 | D | A | -2.8276 | |
| 8 | S | A | -1.9930 | |
| 9 | G | A | 0.0000 | |
| 10 | Y | A | 0.0000 | |
| 11 | E | A | -1.4018 | |
| 12 | V | A | -1.1176 | |
| 13 | H | A | -2.1588 | |
| 14 | H | A | -2.2986 | |
| 15 | Q | A | -2.7364 | |
| 16 | K | A | -2.3133 | |
| 17 | L | A | 0.0000 | |
| 18 | V | A | -0.5221 | |
| 19 | F | A | 0.0000 | |
| 20 | F | A | 0.1021 | |
| 21 | A | A | 0.0000 | |
| 22 | E | A | -2.4590 | |
| 23 | D | A | 0.0000 | |
| 24 | V | A | 0.0000 | |
| 25 | G | A | -1.4361 | |
| 26 | S | A | -1.5271 | |
| 27 | N | A | 0.0000 | |
| 28 | K | A | -1.7293 | |
| 29 | G | A | 0.0000 | |
| 30 | A | A | 0.0000 | |
| 31 | I | A | 0.0000 | |
| 32 | I | A | 0.0962 | |
| 33 | G | A | 0.0000 | |
| 34 | L | A | 0.0000 | |
| 35 | M | A | 0.0000 | |
| 36 | V | A | 1.0018 | |
| 37 | G | A | 0.0000 | |
| 38 | G | A | 0.4470 | |
| 39 | V | A | 0.0000 | |
| 40 | V | A | 0.6548 | |
| 41 | I | A | 0.0000 | |
| 42 | A | A | -0.3494 | |
| 1 | D | B | -1.9117 | |
| 2 | A | B | -1.3239 | |
| 3 | E | B | -1.9671 | |
| 4 | F | B | -0.6907 | |
| 5 | R | B | -2.6303 | |
| 6 | H | B | -2.7990 | |
| 7 | D | B | -3.1438 | |
| 8 | S | B | -2.2983 | |
| 9 | G | B | 0.0000 | |
| 10 | Y | B | 0.0000 | |
| 11 | E | B | -1.4518 | |
| 12 | V | B | -0.6280 | |
| 13 | H | B | -1.7860 | |
| 14 | H | B | -1.9683 | |
| 15 | Q | B | -2.1570 | |
| 16 | K | B | 0.0000 | |
| 17 | L | B | 0.0000 | |
| 18 | V | B | 0.0000 | |
| 19 | F | B | 0.0000 | |
| 20 | F | B | -0.5287 | |
| 21 | A | B | 0.0000 | |
| 22 | E | B | -2.1671 | |
| 23 | D | B | -2.0033 | |
| 24 | V | B | 0.0000 | |
| 25 | G | B | -1.6849 | |
| 26 | S | B | -1.5944 | |
| 27 | N | B | 0.0000 | |
| 28 | K | B | -1.3758 | |
| 29 | G | B | -0.7984 | |
| 30 | A | B | 0.0000 | |
| 31 | I | B | 0.0000 | |
| 32 | I | B | 0.5994 | |
| 33 | G | B | 0.0000 | |
| 34 | L | B | 0.0000 | |
| 35 | M | B | 0.0000 | |
| 36 | V | B | 1.2343 | |
| 37 | G | B | 0.0000 | |
| 38 | G | B | 0.4582 | |
| 39 | V | B | 0.0000 | |
| 40 | V | B | 0.5997 | |
| 41 | I | B | 0.0000 | |
| 42 | A | B | -0.4637 | |
| 1 | D | C | -1.9310 | |
| 2 | A | C | -1.3181 | |
| 3 | E | C | -1.9799 | |
| 4 | F | C | -0.5800 | |
| 5 | R | C | -2.5898 | |
| 6 | H | C | -2.7563 | |
| 7 | D | C | -3.0912 | |
| 8 | S | C | -2.3462 | |
| 9 | G | C | 0.0000 | |
| 10 | Y | C | 0.0000 | |
| 11 | E | C | -1.0878 | |
| 12 | V | C | -0.2539 | |
| 13 | H | C | -1.5405 | |
| 14 | H | C | -2.0116 | |
| 15 | Q | C | -2.2456 | |
| 16 | K | C | -1.4634 | |
| 17 | L | C | 0.0000 | |
| 18 | V | C | 0.0000 | |
| 19 | F | C | 0.0000 | |
| 20 | F | C | -0.3226 | |
| 21 | A | C | 0.0000 | |
| 22 | E | C | -2.5733 | |
| 23 | D | C | 0.0000 | |
| 24 | V | C | 0.0000 | |
| 25 | G | C | -1.3047 | |
| 26 | S | C | -1.4645 | |
| 27 | N | C | 0.0000 | |
| 28 | K | C | -1.1900 | |
| 29 | G | C | -0.5758 | |
| 30 | A | C | 0.0000 | |
| 31 | I | C | 0.0000 | |
| 32 | I | C | 0.5448 | |
| 33 | G | C | 0.0000 | |
| 34 | L | C | 0.0000 | |
| 35 | M | C | 0.0000 | |
| 36 | V | C | 1.1671 | |
| 37 | G | C | 0.0000 | |
| 38 | G | C | 0.5744 | |
| 39 | V | C | 0.0000 | |
| 40 | V | C | 0.6026 | |
| 41 | I | C | 0.0000 | |
| 42 | A | C | -0.2436 | |
| 1 | D | D | -1.9000 | |
| 2 | A | D | -1.3248 | |
| 3 | E | D | -1.9742 | |
| 4 | F | D | -0.7314 | |
| 5 | R | D | -2.6490 | |
| 6 | H | D | -2.7765 | |
| 7 | D | D | -3.1520 | |
| 8 | S | D | -2.0973 | |
| 9 | G | D | 0.0000 | |
| 10 | Y | D | 0.0000 | |
| 11 | E | D | -1.0677 | |
| 12 | V | D | -0.4648 | |
| 13 | H | D | -1.8999 | |
| 14 | H | D | -2.0728 | |
| 15 | Q | D | -2.1530 | |
| 16 | K | D | -1.6011 | |
| 17 | L | D | 0.0000 | |
| 18 | V | D | 0.0000 | |
| 19 | F | D | 0.0000 | |
| 20 | F | D | 0.0640 | |
| 21 | A | D | 0.0000 | |
| 22 | E | D | -2.3783 | |
| 23 | D | D | 0.0000 | |
| 24 | V | D | 0.0000 | |
| 25 | G | D | -1.3730 | |
| 26 | S | D | -1.5574 | |
| 27 | N | D | 0.0000 | |
| 28 | K | D | -1.1452 | |
| 29 | G | D | 0.0000 | |
| 30 | A | D | 0.0000 | |
| 31 | I | D | 0.0000 | |
| 32 | I | D | 0.6017 | |
| 33 | G | D | 0.0000 | |
| 34 | L | D | 0.0000 | |
| 35 | M | D | 0.0000 | |
| 36 | V | D | 1.1188 | |
| 37 | G | D | 0.0000 | |
| 38 | G | D | 0.5257 | |
| 39 | V | D | 0.0000 | |
| 40 | V | D | 0.6522 | |
| 41 | I | D | 0.0000 | |
| 42 | A | D | -0.4504 | |
| 1 | D | E | -1.9042 | |
| 2 | A | E | -1.3153 | |
| 3 | E | E | -2.1096 | |
| 4 | F | E | -0.5935 | |
| 5 | R | E | -2.4461 | |
| 6 | H | E | -2.6629 | |
| 7 | D | E | -3.0592 | |
| 8 | S | E | -2.0423 | |
| 9 | G | E | -1.7554 | |
| 10 | Y | E | 0.0000 | |
| 11 | E | E | -0.7111 | |
| 12 | V | E | -0.4005 | |
| 13 | H | E | -1.9915 | |
| 14 | H | E | -2.1205 | |
| 15 | Q | E | -2.2011 | |
| 16 | K | E | -1.5394 | |
| 17 | L | E | 0.0000 | |
| 18 | V | E | 0.0000 | |
| 19 | F | E | 0.0000 | |
| 20 | F | E | 0.1290 | |
| 21 | A | E | 0.0000 | |
| 22 | E | E | -2.3356 | |
| 23 | D | E | 0.0000 | |
| 24 | V | E | 0.0000 | |
| 25 | G | E | -1.2450 | |
| 26 | S | E | -1.4823 | |
| 27 | N | E | 0.0000 | |
| 28 | K | E | -1.1318 | |
| 29 | G | E | -0.6006 | |
| 30 | A | E | 0.0000 | |
| 31 | I | E | 0.0000 | |
| 32 | I | E | 0.5839 | |
| 33 | G | E | 0.0000 | |
| 34 | L | E | 0.0000 | |
| 35 | M | E | 0.0000 | |
| 36 | V | E | 1.1487 | |
| 37 | G | E | 0.0000 | |
| 38 | G | E | 0.5638 | |
| 39 | V | E | 0.0000 | |
| 40 | V | E | 0.6824 | |
| 41 | I | E | 0.0000 | |
| 42 | A | E | -0.2414 | |
| 1 | D | F | -1.9079 | |
| 2 | A | F | -1.4255 | |
| 3 | E | F | -2.1098 | |
| 4 | F | F | -0.5665 | |
| 5 | R | F | -2.4302 | |
| 6 | H | F | -2.6683 | |
| 7 | D | F | -3.0214 | |
| 8 | S | F | -2.0562 | |
| 9 | G | F | -1.7754 | |
| 10 | Y | F | 0.0000 | |
| 11 | E | F | -0.5222 | |
| 12 | V | F | -0.0935 | |
| 13 | H | F | -1.6804 | |
| 14 | H | F | -1.9809 | |
| 15 | Q | F | -2.3362 | |
| 16 | K | F | -1.4601 | |
| 17 | L | F | 0.0000 | |
| 18 | V | F | 0.0000 | |
| 19 | F | F | 0.0000 | |
| 20 | F | F | 0.1001 | |
| 21 | A | F | 0.0000 | |
| 22 | E | F | -2.4193 | |
| 23 | D | F | 0.0000 | |
| 24 | V | F | 0.0000 | |
| 25 | G | F | -1.4376 | |
| 26 | S | F | -1.4116 | |
| 27 | N | F | 0.0000 | |
| 28 | K | F | -1.3086 | |
| 29 | G | F | -0.8158 | |
| 30 | A | F | 0.0000 | |
| 31 | I | F | 0.0000 | |
| 32 | I | F | 0.5547 | |
| 33 | G | F | 0.0000 | |
| 34 | L | F | 0.0000 | |
| 35 | M | F | 0.0000 | |
| 36 | V | F | 1.0246 | |
| 37 | G | F | 0.0000 | |
| 38 | G | F | 0.5738 | |
| 39 | V | F | 0.0000 | |
| 40 | V | F | 0.6158 | |
| 41 | I | F | 0.0000 | |
| 42 | A | F | -0.2550 | |
| 1 | D | G | -1.9060 | |
| 2 | A | G | -1.4181 | |
| 3 | E | G | -2.0228 | |
| 4 | F | G | -0.5710 | |
| 5 | R | G | -2.5531 | |
| 6 | H | G | -2.6999 | |
| 7 | D | G | -3.0323 | |
| 8 | S | G | -2.2833 | |
| 9 | G | G | 0.0000 | |
| 10 | Y | G | 0.0000 | |
| 11 | E | G | -1.1504 | |
| 12 | V | G | -0.5003 | |
| 13 | H | G | -1.8921 | |
| 14 | H | G | -2.1023 | |
| 15 | Q | G | -2.2964 | |
| 16 | K | G | -1.5886 | |
| 17 | L | G | 0.0000 | |
| 18 | V | G | 0.0000 | |
| 19 | F | G | 0.0000 | |
| 20 | F | G | -0.2259 | |
| 21 | A | G | 0.0000 | |
| 22 | E | G | -2.5280 | |
| 23 | D | G | -1.9295 | |
| 24 | V | G | 0.0000 | |
| 25 | G | G | -1.5599 | |
| 26 | S | G | -1.7230 | |
| 27 | N | G | 0.0000 | |
| 28 | K | G | -1.4565 | |
| 29 | G | G | -0.9551 | |
| 30 | A | G | 0.0000 | |
| 31 | I | G | 0.0000 | |
| 32 | I | G | 0.3750 | |
| 33 | G | G | 0.0000 | |
| 34 | L | G | 0.0000 | |
| 35 | M | G | 0.0000 | |
| 36 | V | G | 0.9665 | |
| 37 | G | G | 0.0000 | |
| 38 | G | G | 0.5317 | |
| 39 | V | G | 0.0000 | |
| 40 | V | G | 0.7204 | |
| 41 | I | G | 0.0000 | |
| 42 | A | G | -0.3319 | |
| 1 | D | H | -1.9132 | |
| 2 | A | H | -1.4080 | |
| 3 | E | H | -1.9758 | |
| 4 | F | H | -0.6530 | |
| 5 | R | H | -2.4563 | |
| 6 | H | H | -2.6489 | |
| 7 | D | H | -3.0045 | |
| 8 | S | H | -2.1208 | |
| 9 | G | H | 0.0000 | |
| 10 | Y | H | 0.0000 | |
| 11 | E | H | -0.7818 | |
| 12 | V | H | -0.6218 | |
| 13 | H | H | -1.8285 | |
| 14 | H | H | -2.1580 | |
| 15 | Q | H | -2.2804 | |
| 16 | K | H | -1.5849 | |
| 17 | L | H | 0.0000 | |
| 18 | V | H | 0.0000 | |
| 19 | F | H | 0.0000 | |
| 20 | F | H | -0.1157 | |
| 21 | A | H | 0.0000 | |
| 22 | E | H | -2.4694 | |
| 23 | D | H | -1.7435 | |
| 24 | V | H | 0.0000 | |
| 25 | G | H | -1.7227 | |
| 26 | S | H | -1.7707 | |
| 27 | N | H | 0.0000 | |
| 28 | K | H | -1.8094 | |
| 29 | G | H | -0.9056 | |
| 30 | A | H | 0.0000 | |
| 31 | I | H | 0.0000 | |
| 32 | I | H | 0.3402 | |
| 33 | G | H | 0.0000 | |
| 34 | L | H | 0.0000 | |
| 35 | M | H | 0.0000 | |
| 36 | V | H | 0.9836 | |
| 37 | G | H | 0.0000 | |
| 38 | G | H | 0.5632 | |
| 39 | V | H | 0.0000 | |
| 40 | V | H | 0.7274 | |
| 41 | I | H | 0.0000 | |
| 42 | A | H | -0.2113 | |
| 1 | D | I | -1.9182 | |
| 2 | A | I | -1.3090 | |
| 3 | E | I | -1.9423 | |
| 4 | F | I | -0.6335 | |
| 5 | R | I | -2.3407 | |
| 6 | H | I | -2.3488 | |
| 7 | D | I | -2.9487 | |
| 8 | S | I | -2.1480 | |
| 9 | G | I | 0.0000 | |
| 10 | Y | I | 0.0000 | |
| 11 | E | I | -0.5420 | |
| 12 | V | I | 0.3045 | |
| 13 | H | I | -1.4710 | |
| 14 | H | I | -1.9069 | |
| 15 | Q | I | -1.8574 | |
| 16 | K | I | -1.3286 | |
| 17 | L | I | 0.0000 | |
| 18 | V | I | 0.0000 | |
| 19 | F | I | 0.0000 | |
| 20 | F | I | -0.0468 | |
| 21 | A | I | 0.0000 | |
| 22 | E | I | -2.4535 | |
| 23 | D | I | -1.6447 | |
| 24 | V | I | 0.0000 | |
| 25 | G | I | -1.3433 | |
| 26 | S | I | -1.5259 | |
| 27 | N | I | 0.0000 | |
| 28 | K | I | -1.1704 | |
| 29 | G | I | -0.6811 | |
| 30 | A | I | 0.0000 | |
| 31 | I | I | 0.0000 | |
| 32 | I | I | 0.5142 | |
| 33 | G | I | 0.0000 | |
| 34 | L | I | 0.0000 | |
| 35 | M | I | 0.0000 | |
| 36 | V | I | 1.0307 | |
| 37 | G | I | 0.0000 | |
| 38 | G | I | 0.6039 | |
| 39 | V | I | 0.0000 | |
| 40 | V | I | 0.7969 | |
| 41 | I | I | 0.0000 | |
| 42 | A | I | -0.3289 | |
| 1 | D | J | -1.9245 | |
| 2 | A | J | -1.3202 | |
| 3 | E | J | -1.9794 | |
| 4 | F | J | -0.6575 | |
| 5 | R | J | -2.4834 | |
| 6 | H | J | -2.7406 | |
| 7 | D | J | -3.1325 | |
| 8 | S | J | -2.1063 | |
| 9 | G | J | 0.0000 | |
| 10 | Y | J | 0.0000 | |
| 11 | E | J | -0.7042 | |
| 12 | V | J | -0.4606 | |
| 13 | H | J | -1.6286 | |
| 14 | H | J | -2.0485 | |
| 15 | Q | J | -2.1961 | |
| 16 | K | J | -1.4514 | |
| 17 | L | J | 0.0000 | |
| 18 | V | J | 0.0000 | |
| 19 | F | J | 0.0000 | |
| 20 | F | J | 0.2484 | |
| 21 | A | J | 0.0000 | |
| 22 | E | J | -2.2073 | |
| 23 | D | J | -1.5976 | |
| 24 | V | J | 0.0000 | |
| 25 | G | J | -1.3345 | |
| 26 | S | J | -1.5399 | |
| 27 | N | J | 0.0000 | |
| 28 | K | J | -1.2094 | |
| 29 | G | J | -0.6629 | |
| 30 | A | J | 0.0000 | |
| 31 | I | J | 0.0000 | |
| 32 | I | J | 0.6885 | |
| 33 | G | J | 0.0000 | |
| 34 | L | J | 0.0000 | |
| 35 | M | J | 0.0000 | |
| 36 | V | J | 1.1293 | |
| 37 | G | J | 0.0000 | |
| 38 | G | J | 0.5283 | |
| 39 | V | J | 0.0000 | |
| 40 | V | J | 0.7193 | |
| 41 | I | J | 0.0000 | |
| 42 | A | J | -0.4170 | |
| 1 | D | K | -1.8920 | |
| 2 | A | K | -1.3023 | |
| 3 | E | K | -1.9468 | |
| 4 | F | K | -0.6433 | |
| 5 | R | K | -2.5320 | |
| 6 | H | K | -2.6915 | |
| 7 | D | K | -3.0548 | |
| 8 | S | K | -2.1753 | |
| 9 | G | K | -1.8325 | |
| 10 | Y | K | 0.0000 | |
| 11 | E | K | -0.6216 | |
| 12 | V | K | 0.0525 | |
| 13 | H | K | -1.6104 | |
| 14 | H | K | -2.0165 | |
| 15 | Q | K | -2.1140 | |
| 16 | K | K | -1.4482 | |
| 17 | L | K | 0.0000 | |
| 18 | V | K | 0.0000 | |
| 19 | F | K | 0.0000 | |
| 20 | F | K | 0.1954 | |
| 21 | A | K | 0.0000 | |
| 22 | E | K | -2.3819 | |
| 23 | D | K | 0.0000 | |
| 24 | V | K | 0.0000 | |
| 25 | G | K | -1.2656 | |
| 26 | S | K | -1.4474 | |
| 27 | N | K | 0.0000 | |
| 28 | K | K | -1.0840 | |
| 29 | G | K | -0.5861 | |
| 30 | A | K | 0.0000 | |
| 31 | I | K | 0.0000 | |
| 32 | I | K | 0.7079 | |
| 33 | G | K | 0.0000 | |
| 34 | L | K | 0.0000 | |
| 35 | M | K | 0.0000 | |
| 36 | V | K | 1.1622 | |
| 37 | G | K | 0.0000 | |
| 38 | G | K | 0.5749 | |
| 39 | V | K | 0.0000 | |
| 40 | V | K | 0.7540 | |
| 41 | I | K | 0.0000 | |
| 42 | A | K | -0.3853 | |
| 1 | D | L | -1.9000 | |
| 2 | A | L | -1.4308 | |
| 3 | E | L | -2.0221 | |
| 4 | F | L | -0.7058 | |
| 5 | R | L | -2.5037 | |
| 6 | H | L | -2.7830 | |
| 7 | D | L | -3.1429 | |
| 8 | S | L | -2.2550 | |
| 9 | G | L | 0.0000 | |
| 10 | Y | L | 0.0000 | |
| 11 | E | L | -0.9760 | |
| 12 | V | L | -0.2619 | |
| 13 | H | L | -1.6809 | |
| 14 | H | L | -2.0041 | |
| 15 | Q | L | -2.0723 | |
| 16 | K | L | -1.4326 | |
| 17 | L | L | 0.0000 | |
| 18 | V | L | 0.0000 | |
| 19 | F | L | 0.0000 | |
| 20 | F | L | 0.1946 | |
| 21 | A | L | -1.0465 | |
| 22 | E | L | -2.3675 | |
| 23 | D | L | -1.6327 | |
| 24 | V | L | 0.0000 | |
| 25 | G | L | -1.3094 | |
| 26 | S | L | -1.4706 | |
| 27 | N | L | 0.0000 | |
| 28 | K | L | -1.1799 | |
| 29 | G | L | -1.0181 | |
| 30 | A | L | 0.0000 | |
| 31 | I | L | 0.0000 | |
| 32 | I | L | 0.3616 | |
| 33 | G | L | 0.0000 | |
| 34 | L | L | 0.0000 | |
| 35 | M | L | 0.0000 | |
| 36 | V | L | 0.0000 | |
| 37 | G | L | 0.0000 | |
| 38 | G | L | 0.4937 | |
| 39 | V | L | 0.0000 | |
| 40 | V | L | 0.9158 | |
| 41 | I | L | 0.0000 | |
| 42 | A | L | -0.4871 |