| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGATFGNYGMGWFRQAPGKERELVAAITSNGFYGYYPDSVEGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCNARDSRFGKNGLDDYRAWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | EG44H |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.346133 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] FoldX: Building mutant model (00:00:37)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:43)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:10)
[INFO] Main: Simulation completed successfully. (00:01:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.4458 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.4662 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.2632 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5583 | |
| 8 | G | H | -1.1965 | |
| 9 | G | H | -0.7940 | |
| 10 | G | H | -0.1061 | |
| 11 | L | H | 1.0059 | |
| 12 | V | H | 0.0269 | |
| 13 | Q | H | -1.2476 | |
| 14 | P | H | -1.4899 | |
| 15 | G | H | -1.4136 | |
| 16 | G | H | -0.9888 | |
| 17 | S | H | -1.4352 | |
| 18 | L | H | -1.0430 | |
| 19 | R | H | -2.3323 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.4064 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.0752 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -1.1252 | |
| 26 | G | H | -1.4259 | |
| 27 | A | H | -1.1700 | |
| 28 | T | H | -1.2025 | |
| 29 | F | H | 0.0000 | |
| 30 | G | H | -1.9268 | |
| 31 | N | H | -2.0913 | |
| 32 | Y | H | 0.0000 | |
| 33 | G | H | -0.8908 | |
| 34 | M | H | 0.0000 | |
| 35 | G | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | F | H | 0.0000 | |
| 38 | R | H | -1.3667 | |
| 39 | Q | H | -1.8498 | |
| 40 | A | H | -1.7975 | |
| 41 | P | H | -1.1896 | |
| 42 | G | H | -1.6758 | |
| 43 | K | H | -2.8000 | |
| 44 | G | H | -2.4321 | mutated: EG44H |
| 45 | R | H | -2.4793 | |
| 46 | E | H | -2.6085 | |
| 47 | L | H | -0.6787 | |
| 48 | V | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | A | H | 0.5485 | |
| 51 | I | H | 0.0000 | |
| 52 | T | H | 0.2959 | |
| 53 | S | H | -1.1437 | |
| 54 | N | H | -0.9113 | |
| 55 | G | H | 0.2104 | |
| 56 | F | H | 2.1041 | |
| 57 | Y | H | 2.1552 | |
| 58 | G | H | 1.2873 | |
| 59 | Y | H | 1.1259 | |
| 60 | Y | H | -0.3186 | |
| 61 | P | H | -1.3364 | |
| 62 | D | H | -2.4992 | |
| 63 | S | H | -1.8869 | |
| 64 | V | H | 0.0000 | |
| 65 | E | H | -2.6159 | |
| 66 | G | H | -1.9597 | |
| 67 | R | H | -1.8471 | |
| 68 | F | H | 0.0000 | |
| 69 | T | H | -0.9799 | |
| 70 | I | H | 0.0000 | |
| 71 | S | H | -0.2570 | |
| 72 | R | H | 0.0000 | |
| 73 | D | H | -2.4991 | |
| 74 | N | H | -3.0254 | |
| 75 | A | H | -1.9804 | |
| 76 | K | H | -2.7817 | |
| 77 | R | H | -2.5513 | |
| 78 | M | H | -1.2862 | |
| 79 | V | H | 0.0000 | |
| 80 | Y | H | 0.0000 | |
| 81 | L | H | 0.0000 | |
| 82 | Q | H | -1.6656 | |
| 83 | M | H | 0.0000 | |
| 84 | N | H | -1.9566 | |
| 85 | S | H | -1.4013 | |
| 86 | L | H | 0.0000 | |
| 87 | R | H | -2.2299 | |
| 88 | A | H | -1.6582 | |
| 89 | E | H | -2.2109 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | -0.8448 | |
| 92 | A | H | 0.0000 | |
| 93 | V | H | -0.4291 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | -0.2592 | |
| 96 | C | H | 0.0000 | |
| 97 | N | H | 0.0000 | |
| 98 | A | H | 0.0000 | |
| 99 | R | H | -1.5043 | |
| 100 | D | H | 0.0000 | |
| 101 | S | H | -1.5837 | |
| 102 | R | H | -1.8587 | |
| 103 | F | H | -0.6846 | |
| 104 | G | H | -1.7859 | |
| 105 | K | H | -2.7034 | |
| 106 | N | H | -2.2897 | |
| 107 | G | H | -1.3899 | |
| 108 | L | H | -0.6396 | |
| 109 | D | H | -2.1725 | |
| 110 | D | H | -2.0726 | |
| 111 | Y | H | -1.1818 | |
| 112 | R | H | -2.0129 | |
| 113 | A | H | 0.0000 | |
| 114 | W | H | -0.1484 | |
| 115 | G | H | -0.0729 | |
| 116 | Q | H | -0.6496 | |
| 117 | G | H | 0.0000 | |
| 118 | T | H | -0.6661 | |
| 119 | Q | H | -0.9888 | |
| 120 | V | H | 0.0000 | |
| 121 | T | H | -0.2656 | |
| 122 | V | H | 0.0000 | |
| 123 | S | H | -0.7318 | |
| 124 | S | H | -0.6558 |