| Chain sequence(s) |
L: KTTDPSGGTVCPPSVD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 205 | K | L | -1.7137 | |
| 206 | T | L | -0.4349 | |
| 207 | T | L | -0.4420 | |
| 208 | D | L | -1.8482 | |
| 209 | P | L | -0.6237 | |
| 210 | S | L | -0.3443 | |
| 211 | G | L | -0.5905 | |
| 212 | G | L | -0.5642 | |
| 213 | T | L | 0.0066 | |
| 214 | V | L | 0.9301 | |
| 215 | C | L | 0.4959 | |
| 216 | P | L | -0.2395 | |
| 217 | P | L | -0.3380 | |
| 218 | S | L | 0.0655 | |
| 219 | V | L | 1.4071 | |
| 220 | D | L | -1.4656 |