| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPLHPGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPEGHPLPAAPPPSPLYTPPPASSPLATPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQISTPAVNVYDPANFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9401 | |
| 2 | L | A | 1.9612 | |
| 3 | P | A | 0.8293 | |
| 4 | P | A | 0.3748 | |
| 5 | T | A | 0.1220 | |
| 6 | T | A | 0.1310 | |
| 7 | P | A | 0.1942 | |
| 8 | V | A | 1.2162 | |
| 9 | A | A | 0.0881 | |
| 10 | K | A | -1.0271 | |
| 11 | V | A | -0.1633 | |
| 12 | Q | A | -1.4013 | |
| 13 | S | A | -1.5463 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4085 | |
| 16 | E | A | -2.4336 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4631 | |
| 20 | P | A | 0.1315 | |
| 21 | T | A | 0.1606 | |
| 22 | S | A | -0.0946 | |
| 23 | L | A | 0.0937 | |
| 24 | F | A | -0.0269 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2796 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8995 | |
| 31 | R | A | -2.6865 | |
| 32 | L | A | -0.8013 | |
| 33 | L | A | 1.1603 | |
| 34 | T | A | 1.3674 | |
| 35 | V | A | 1.8195 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2313 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6309 | |
| 40 | K | A | -1.6826 | |
| 41 | D | A | -0.7365 | |
| 42 | I | A | 1.2609 | |
| 43 | V | A | 2.2227 | |
| 44 | V | A | 1.6611 | |
| 45 | N | A | -0.5327 | |
| 46 | G | A | -0.3622 | |
| 47 | K | A | -0.1298 | |
| 48 | V | A | 2.0248 | |
| 49 | L | A | 2.5272 | |
| 50 | V | A | 1.4314 | |
| 51 | P | A | 0.3200 | |
| 52 | K | A | -0.6963 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1564 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3635 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2315 | |
| 70 | K | A | -1.7802 | |
| 71 | F | A | -0.6245 | |
| 72 | A | A | -0.5772 | |
| 73 | L | A | -0.8657 | |
| 74 | P | A | -1.2140 | |
| 75 | Q | A | -2.5070 | |
| 76 | K | A | -3.1119 | |
| 77 | D | A | -2.9933 | |
| 78 | F | A | -1.6703 | |
| 79 | Y | A | -1.8865 | |
| 80 | D | A | -2.6882 | |
| 81 | P | A | -2.3652 | |
| 82 | E | A | -3.0569 | |
| 83 | K | A | -3.3958 | |
| 84 | E | A | -2.4580 | |
| 85 | R | A | -1.2955 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6566 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9938 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3779 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6980 | |
| 99 | G | A | -0.5367 | |
| 100 | P | A | -0.3969 | |
| 101 | L | A | 0.0593 | |
| 102 | G | A | -0.1499 | |
| 103 | K | A | -0.4536 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.3293 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1828 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4423 | |
| 110 | L | A | 0.3642 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1196 | |
| 113 | K | A | -0.4878 | |
| 114 | L | A | -0.9627 | |
| 115 | G | A | -1.0812 | |
| 116 | D | A | -1.3850 | |
| 117 | T | A | -1.0197 | |
| 118 | E | A | -1.6877 | |
| 119 | N | A | -2.1668 | |
| 120 | P | A | -1.9376 | |
| 121 | T | A | -1.6303 | |
| 122 | E | A | -2.3815 | |
| 123 | P | A | -1.3409 | |
| 124 | L | A | -0.9769 | |
| 125 | H | A | -1.3578 | |
| 126 | P | A | -1.3821 | |
| 127 | G | A | -1.5431 | |
| 128 | A | A | -1.2907 | |
| 129 | D | A | -2.2298 | |
| 130 | D | A | -1.7557 | |
| 131 | R | A | -1.0744 | |
| 132 | V | A | 0.2902 | |
| 133 | A | A | 0.4638 | |
| 134 | F | A | 0.2937 | |
| 135 | S | A | -0.0248 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5613 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1972 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1262 | |
| 157 | D | A | 0.2951 | |
| 158 | I | A | 0.8225 | |
| 159 | A | A | 0.1094 | |
| 160 | E | A | -1.4831 | |
| 161 | P | A | -0.2263 | |
| 162 | C | A | 0.1895 | |
| 163 | P | A | -0.1691 | |
| 164 | G | A | -0.0715 | |
| 165 | L | A | 0.6125 | |
| 166 | P | A | -0.1067 | |
| 167 | P | A | -0.3355 | |
| 168 | G | A | -0.4243 | |
| 169 | A | A | -0.0264 | |
| 170 | C | A | 0.7405 | |
| 171 | P | A | 0.5528 | |
| 172 | P | A | 0.7513 | |
| 173 | I | A | 2.0471 | |
| 174 | Q | A | 0.8570 | |
| 175 | L | A | 1.4602 | |
| 176 | V | A | 0.8454 | |
| 177 | N | A | -0.2941 | |
| 178 | S | A | 0.0311 | |
| 179 | V | A | 0.4348 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3829 | |
| 182 | D | A | 0.0814 | |
| 183 | G | A | -0.1558 | |
| 184 | D | A | -0.5238 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1344 | |
| 190 | F | A | 0.0585 | |
| 191 | G | A | -0.1088 | |
| 192 | N | A | -0.2561 | |
| 193 | M | A | -0.1143 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3775 | |
| 197 | E | A | -2.6072 | |
| 198 | L | A | -1.2068 | |
| 199 | Q | A | -2.5388 | |
| 200 | Q | A | -3.3187 | |
| 201 | D | A | -3.5850 | |
| 202 | R | A | -3.3286 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2105 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3464 | |
| 211 | S | A | -1.8734 | |
| 212 | T | A | -1.4153 | |
| 213 | R | A | -2.0423 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1525 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3701 | |
| 220 | L | A | 0.5956 | |
| 221 | K | A | -1.1290 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8173 | |
| 224 | N | A | -1.5028 | |
| 225 | E | A | -1.2449 | |
| 226 | A | A | -0.6012 | |
| 227 | Y | A | -0.3571 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6795 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0825 | |
| 234 | F | A | 0.2651 | |
| 235 | G | A | -0.8281 | |
| 236 | R | A | -2.6209 | |
| 237 | R | A | -2.9064 | |
| 238 | E | A | -2.1229 | |
| 239 | Q | A | -0.2004 | |
| 240 | V | A | 1.4438 | |
| 241 | Y | A | 1.1726 | |
| 242 | A | A | 0.3295 | |
| 243 | R | A | -0.6761 | |
| 244 | H | A | -0.8055 | |
| 245 | F | A | 0.1326 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8070 | |
| 249 | S | A | -1.2135 | |
| 250 | G | A | -1.1105 | |
| 251 | P | A | -1.0304 | |
| 252 | E | A | -1.3800 | |
| 253 | G | A | -1.2890 | |
| 254 | H | A | -1.4650 | |
| 255 | P | A | -0.9922 | |
| 256 | L | A | 0.2186 | |
| 257 | P | A | 0.0591 | |
| 258 | A | A | 0.1494 | |
| 259 | A | A | 0.0238 | |
| 260 | P | A | -0.5195 | |
| 261 | P | A | -0.3961 | |
| 262 | P | A | -0.3087 | |
| 263 | S | A | 0.1339 | |
| 264 | P | A | 0.4294 | |
| 265 | L | A | 1.5721 | |
| 266 | Y | A | 0.9699 | |
| 267 | T | A | 0.1408 | |
| 268 | P | A | 0.0819 | |
| 269 | P | A | -0.0066 | |
| 270 | P | A | -0.2163 | |
| 271 | A | A | -0.0637 | |
| 272 | S | A | -0.1659 | |
| 273 | S | A | 0.0485 | |
| 274 | P | A | 0.0510 | |
| 275 | L | A | 0.7627 | |
| 276 | A | A | 0.3165 | |
| 277 | T | A | 0.2982 | |
| 278 | P | A | 0.1554 | |
| 279 | P | A | -0.3777 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.4987 | |
| 282 | D | A | -1.0976 | |
| 283 | Y | A | 0.7541 | |
| 284 | F | A | 0.6521 | |
| 285 | G | A | 0.3087 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9876 | |
| 291 | L | A | 1.6346 | |
| 292 | V | A | 0.6574 | |
| 293 | S | A | -0.1575 | |
| 294 | S | A | -0.9619 | |
| 295 | D | A | -1.8416 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1330 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6833 | |
| 301 | R | A | -1.9509 | |
| 302 | P | A | -1.0346 | |
| 303 | F | A | -0.2176 | |
| 304 | W | A | -0.5714 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0838 | |
| 307 | R | A | -2.8277 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2415 | |
| 310 | G | A | -1.2143 | |
| 311 | N | A | -1.2611 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7504 | |
| 319 | N | A | -0.8319 | |
| 320 | E | A | -1.0275 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3095 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0350 | |
| 333 | N | A | 0.5828 | |
| 334 | F | A | 1.7629 | |
| 335 | T | A | 0.9193 | |
| 336 | I | A | 0.4448 | |
| 337 | S | A | -0.8703 | |
| 338 | Q | A | -1.4931 | |
| 339 | Q | A | -0.7330 | |
| 340 | I | A | 1.0291 | |
| 341 | S | A | 0.5747 | |
| 342 | T | A | 0.1438 | |
| 343 | P | A | -0.1579 | |
| 344 | A | A | 0.1793 | |
| 345 | V | A | 0.7668 | |
| 346 | N | A | 0.0228 | |
| 347 | V | A | 1.7057 | |
| 348 | Y | A | 1.5384 | |
| 349 | D | A | -0.0002 | |
| 350 | P | A | -0.5606 | |
| 351 | A | A | -0.2103 | |
| 352 | N | A | 0.0932 | |
| 353 | F | A | -0.6103 | |
| 354 | K | A | -1.8609 | |
| 355 | N | A | -1.7410 | |
| 356 | Y | A | 0.0335 | |
| 357 | L | A | 0.7405 | |
| 358 | R | A | 0.9993 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3869 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0774 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0607 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6907 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2742 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3076 | |
| 376 | L | A | -1.7070 | |
| 377 | D | A | -1.9703 | |
| 378 | P | A | -1.0290 | |
| 379 | G | A | -1.0068 | |
| 380 | V | A | -0.9267 | |
| 381 | L | A | -0.5251 | |
| 382 | A | A | -0.6526 | |
| 383 | H | A | -0.8071 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4124 | |
| 386 | T | A | -0.5518 | |
| 387 | M | A | -0.2974 | |
| 388 | N | A | -0.8652 | |
| 389 | P | A | -1.2297 | |
| 390 | T | A | -1.4117 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4057 | |
| 393 | E | A | -2.7372 | |
| 394 | N | A | -2.4352 | |
| 395 | W | A | -1.3297 | |
| 396 | N | A | -1.1317 | |
| 397 | L | A | -0.2130 | |
| 398 | G | A | 0.5037 | |
| 399 | F | A | 2.4030 | |
| 400 | V | A | 1.8139 | |
| 401 | P | A | 0.0460 | |
| 402 | P | A | -1.7770 | |
| 403 | K | A | -3.3070 | |
| 404 | E | A | -3.8222 | |
| 405 | R | A | -3.8392 | |
| 406 | E | A | -3.7604 | |
| 407 | D | A | -2.8511 | |
| 408 | P | A | -1.7522 | |
| 409 | Y | A | -0.9805 | |
| 410 | K | A | -2.1053 | |
| 411 | G | A | -0.6301 | |
| 412 | L | A | 0.6813 | |
| 413 | I | A | 1.5853 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4115 | |
| 416 | E | A | -1.7258 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9584 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0409 | |
| 421 | E | A | -2.7688 | |
| 422 | R | A | -2.6058 | |
| 423 | F | A | -1.2646 | |
| 424 | S | A | -1.4634 | |
| 425 | Q | A | -1.8603 | |
| 426 | D | A | -2.9776 | |
| 427 | L | A | -2.1674 | |
| 428 | D | A | -3.0397 | |
| 429 | Q | A | -2.7642 | |
| 430 | F | A | -1.6129 | |
| 431 | A | A | -1.1290 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2359 | |
| 435 | K | A | -1.0721 | |
| 436 | F | A | -0.0969 | |
| 437 | L | A | 0.7945 | |
| 438 | Y | A | 0.6354 | |
| 439 | Q | A | -0.3792 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine