| Chain sequence(s) |
H: QVTLKESGPTLVKPTQTLTLTCTFSGFSLTTTGEGVGWIRQPPGKALEFLAFIYWNDAKRYNPSLQSRLTITKDASKKQVVLTLTNLDPVDTATYYCARTSGWDIEFEYWGQGTLVTVSS
L: EIVLTQSPGTLSLSPGERATLSCRASETVSNDKVAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISGLEPEDFVVYYCQQYASSPRTFGQGTK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3775 | |
| 2 | V | H | 0.0000 | |
| 3 | T | H | -0.9348 | |
| 4 | L | H | 0.0000 | |
| 5 | K | H | -1.7890 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.7620 | |
| 8 | G | H | -0.3029 | |
| 9 | P | H | 0.1205 | |
| 11 | T | H | 0.5554 | |
| 12 | L | H | 1.0583 | |
| 13 | V | H | 0.0000 | |
| 14 | K | H | -1.2465 | |
| 15 | P | H | -1.3652 | |
| 16 | T | H | -1.6079 | |
| 17 | Q | H | -1.7597 | |
| 18 | T | H | -1.1742 | |
| 19 | L | H | 0.0000 | |
| 20 | T | H | -0.1270 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.3609 | |
| 23 | C | H | 0.0000 | |
| 24 | T | H | -1.2147 | |
| 25 | F | H | 0.0000 | |
| 26 | S | H | -1.0262 | |
| 27 | G | H | -1.0646 | |
| 28 | F | H | 0.0000 | |
| 29 | S | H | -0.3670 | |
| 30 | L | H | 0.0000 | |
| 31 | T | H | -0.4266 | |
| 34 | T | H | -0.2190 | |
| 35 | T | H | -0.1086 | |
| 36 | G | H | 0.0000 | |
| 37 | E | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | V | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7743 | |
| 45 | P | H | 0.0000 | |
| 46 | P | H | -0.7909 | |
| 47 | G | H | -1.4497 | |
| 48 | K | H | -2.2530 | |
| 49 | A | H | -1.2949 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7804 | |
| 52 | F | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | F | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.6320 | |
| 58 | W | H | -0.5920 | |
| 59 | N | H | -1.5328 | |
| 63 | D | H | -1.6361 | |
| 64 | A | H | -1.1186 | |
| 65 | K | H | -1.3100 | |
| 66 | R | H | -1.6182 | |
| 67 | Y | H | -0.9770 | |
| 68 | N | H | -0.8481 | |
| 69 | P | H | -1.0553 | |
| 70 | S | H | -0.6157 | |
| 71 | L | H | -0.7278 | |
| 72 | Q | H | -1.5575 | |
| 74 | S | H | -0.9484 | |
| 75 | R | H | -1.0829 | |
| 76 | L | H | 0.0000 | |
| 77 | T | H | -0.4598 | |
| 78 | I | H | 0.0000 | |
| 79 | T | H | -0.4656 | |
| 80 | K | H | -1.1781 | |
| 81 | D | H | -1.9513 | |
| 82 | A | H | -1.4809 | |
| 83 | S | H | -1.5886 | |
| 84 | K | H | -2.5458 | |
| 85 | K | H | -2.0889 | |
| 86 | Q | H | -1.7211 | |
| 87 | V | H | 0.0000 | |
| 88 | V | H | 0.0398 | |
| 89 | L | H | 0.0000 | |
| 90 | T | H | -0.0498 | |
| 91 | L | H | 0.0000 | |
| 92 | T | H | -1.1893 | |
| 93 | N | H | -2.0508 | |
| 94 | L | H | 0.0000 | |
| 95 | D | H | -1.2843 | |
| 96 | P | H | -0.1103 | |
| 97 | V | H | 1.2474 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.4895 | |
| 100 | A | H | 0.0000 | |
| 101 | T | H | -0.0130 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.1598 | |
| 107 | T | H | 0.0000 | |
| 108 | S | H | -0.0283 | |
| 109 | G | H | 0.1809 | |
| 110 | W | H | 0.7079 | |
| 112 | D | H | -0.5672 | |
| 113 | I | H | 0.1425 | |
| 114 | E | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | E | H | -0.5150 | |
| 117 | Y | H | -0.3993 | |
| 118 | W | H | -0.6277 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.7491 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.3194 | |
| 123 | L | H | 0.5480 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.4714 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.2697 | |
| 128 | S | H | -0.5257 | |
| 1 | E | L | -1.6588 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.6541 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.7400 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.9023 | |
| 8 | P | L | -0.5399 | |
| 9 | G | L | -0.8090 | |
| 10 | T | L | -0.3495 | |
| 11 | L | L | 0.0140 | |
| 12 | S | L | 0.0234 | |
| 13 | L | L | -0.3335 | |
| 14 | S | L | -0.9508 | |
| 15 | P | L | -1.7029 | |
| 16 | G | L | -1.9286 | |
| 17 | E | L | -2.4340 | |
| 18 | R | L | -2.5926 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6933 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.9505 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3481 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.9314 | |
| 27 | E | L | -1.4948 | |
| 28 | T | L | -1.3402 | |
| 29 | V | L | 0.0000 | |
| 30 | S | L | -1.2415 | |
| 36 | N | L | -1.8835 | |
| 37 | D | L | -1.7058 | |
| 38 | K | L | -1.0429 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.2217 | |
| 46 | P | L | -0.9943 | |
| 47 | G | L | -1.4144 | |
| 48 | Q | L | -2.0573 | |
| 49 | A | L | -1.3806 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.5334 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.3903 | |
| 56 | G | L | -0.9419 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.7338 | |
| 66 | S | L | -0.6679 | |
| 67 | R | L | -1.3001 | |
| 68 | A | L | -0.7141 | |
| 69 | T | L | -0.5640 | |
| 70 | G | L | -0.8589 | |
| 71 | I | L | 0.0000 | |
| 72 | P | L | -1.3061 | |
| 74 | D | L | -2.1960 | |
| 75 | R | L | -1.6202 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.9201 | |
| 78 | G | L | -0.5243 | |
| 79 | S | L | -0.7721 | |
| 80 | G | L | -1.2415 | |
| 83 | S | L | -1.4398 | |
| 84 | G | L | -1.4121 | |
| 85 | T | L | -1.7119 | |
| 86 | D | L | -2.2511 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.8372 | |
| 89 | L | L | 0.0000 | |
| 90 | S | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.8818 | |
| 93 | G | L | -1.8902 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -2.2921 | |
| 96 | P | L | -1.5821 | |
| 97 | E | L | -1.8820 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.2494 | |
| 100 | V | L | 0.0414 | |
| 101 | V | L | 0.2563 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | A | L | -0.7689 | |
| 109 | S | L | -0.6469 | |
| 114 | S | L | -0.8900 | |
| 115 | P | L | 0.0000 | |
| 116 | R | L | -0.4888 | |
| 117 | T | L | -0.1417 | |
| 118 | F | L | 0.1383 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.1411 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.2107 |