Project name: c24be5ce9146a1f

Status: done

Started: 2026-05-20 10:47:28
Settings
Chain sequence(s) A: FEKGHFEF
C: FEKGHFEF
B: FEKGHFEF
E: FEKGHFEF
D: FEKGHFEF
G: FEKGHFEF
F: FEKGHFEF
I: FEKGHFEF
H: FEKGHFEF
K: FEKGHFEF
J: FEKGHFEF
M: FEKGHFEF
L: FEKGHFEF
O: FEKGHFEF
N: FEKGHFEF
Q: FEKGHFEF
P: FEKGHFEF
S: FEKGHFEF
R: FEKGHFEF
T: FEKGHFEF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:28)
Show buried residues

Minimal score value
-2.3494
Maximal score value
2.4825
Average score
0.152
Total score value
24.3252

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 1.9159
2 E A 0.2420
3 K A -0.4107
4 G A 0.0000
5 H A -0.7035
6 F A 0.0000
7 E A -0.2970
8 F A 1.3946
1 F B 2.1635
2 E B 0.4490
3 K B -0.7148
4 G B 0.0000
5 H B -1.0340
6 F B -0.5971
7 E B -1.0561
8 F B 0.4888
1 F C 1.9760
2 E C 0.4013
3 K C -1.2224
4 G C 0.0000
5 H C -1.5889
6 F C -0.9897
7 E C -1.4197
8 F C 0.2617
1 F D 0.9261
2 E D -1.5285
3 K D -2.3494
4 G D -1.6398
5 H D -1.9834
6 F D -0.9677
7 E D -1.2485
8 F D 1.2333
1 F E 2.2728
2 E E 0.8428
3 K E -0.2839
4 G E 0.0000
5 H E -0.4874
6 F E -0.1411
7 E E -0.0620
8 F E 1.2107
1 F F 2.1252
2 E F 0.4627
3 K F -0.3377
4 G F 0.0000
5 H F -0.7384
6 F F -0.1720
7 E F 0.3600
8 F F 1.7430
1 F G 2.4825
2 E G 1.1589
3 K G -0.3709
4 G G 0.0000
5 H G -0.7581
6 F G -0.4186
7 E G 0.0201
8 F G 1.3896
1 F H 2.3485
2 E H 0.7521
3 K H -0.4980
4 G H 0.0000
5 H H -0.9419
6 F H -0.4593
7 E H 0.0091
8 F H 1.2239
1 F I 2.3331
2 E I 0.8319
3 K I -0.5357
4 G I 0.0000
5 H I -0.6145
6 F I -0.3645
7 E I -0.0246
8 F I 1.4138
1 F J 2.1595
2 E J 0.4409
3 K J -0.4892
4 G J 0.0000
5 H J -0.6218
6 F J -0.3606
7 E J 0.1425
8 F J 1.3057
1 F K 2.2105
2 E K 0.7563
3 K K -0.3777
4 G K 0.0000
5 H K -0.6192
6 F K -0.4569
7 E K -0.1149
8 F K 1.1235
1 F L 2.4194
2 E L 0.9419
3 K L -0.7188
4 G L 0.0000
5 H L -0.5400
6 F L -0.2667
7 E L 0.0892
8 F L 1.3781
1 F M 2.2481
2 E M 0.6496
3 K M -0.6539
4 G M 0.0000
5 H M -0.7223
6 F M -0.3922
7 E M 0.0990
8 F M 1.2390
1 F N 2.3519
2 E N 0.7705
3 K N -0.7030
4 G N 0.0000
5 H N -0.5844
6 F N -0.3292
7 E N 0.0439
8 F N 1.2021
1 F O 2.3700
2 E O 0.9289
3 K O -0.6739
4 G O 0.0000
5 H O -1.1031
6 F O -0.6222
7 E O -0.0985
8 F O 1.2412
1 F P 2.2132
2 E P 0.3744
3 K P -0.8050
4 G P 0.0000
5 H P -0.9822
6 F P -0.5962
7 E P -0.1926
8 F P 1.1060
1 F Q 2.2342
2 E Q 0.2738
3 K Q -0.7681
4 G Q 0.0000
5 H Q -0.6341
6 F Q -0.5490
7 E Q 0.1554
8 F Q 1.3042
1 F R 2.2844
2 E R 0.7506
3 K R -0.5765
4 G R 0.0000
5 H R -0.7323
6 F R -0.4888
7 E R -0.1191
8 F R 1.2441
1 F S 1.2678
2 E S -1.0221
3 K S -1.7526
4 G S -1.2437
5 H S -1.5542
6 F S -0.7716
7 E S -0.9195
8 F S 1.3424
1 F T 2.1001
2 E T 0.7214
3 K T -0.7783
4 G T 0.0000
5 H T -1.2269
6 F T -0.6987
7 E T -0.6673
8 F T 0.8957
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Laboratory of Theory of Biopolymers 2018