| Chain sequence(s) |
A: FEKGHFEF
C: FEKGHFEF B: FEKGHFEF E: FEKGHFEF D: FEKGHFEF G: FEKGHFEF F: FEKGHFEF I: FEKGHFEF H: FEKGHFEF K: FEKGHFEF J: FEKGHFEF M: FEKGHFEF L: FEKGHFEF O: FEKGHFEF N: FEKGHFEF Q: FEKGHFEF P: FEKGHFEF S: FEKGHFEF R: FEKGHFEF T: FEKGHFEF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:24)
[INFO] Main: Simulation completed successfully. (00:05:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.9159 | |
| 2 | E | A | 0.2420 | |
| 3 | K | A | -0.4107 | |
| 4 | G | A | 0.0000 | |
| 5 | H | A | -0.7035 | |
| 6 | F | A | 0.0000 | |
| 7 | E | A | -0.2970 | |
| 8 | F | A | 1.3946 | |
| 1 | F | B | 2.1635 | |
| 2 | E | B | 0.4490 | |
| 3 | K | B | -0.7148 | |
| 4 | G | B | 0.0000 | |
| 5 | H | B | -1.0340 | |
| 6 | F | B | -0.5971 | |
| 7 | E | B | -1.0561 | |
| 8 | F | B | 0.4888 | |
| 1 | F | C | 1.9760 | |
| 2 | E | C | 0.4013 | |
| 3 | K | C | -1.2224 | |
| 4 | G | C | 0.0000 | |
| 5 | H | C | -1.5889 | |
| 6 | F | C | -0.9897 | |
| 7 | E | C | -1.4197 | |
| 8 | F | C | 0.2617 | |
| 1 | F | D | 0.9261 | |
| 2 | E | D | -1.5285 | |
| 3 | K | D | -2.3494 | |
| 4 | G | D | -1.6398 | |
| 5 | H | D | -1.9834 | |
| 6 | F | D | -0.9677 | |
| 7 | E | D | -1.2485 | |
| 8 | F | D | 1.2333 | |
| 1 | F | E | 2.2728 | |
| 2 | E | E | 0.8428 | |
| 3 | K | E | -0.2839 | |
| 4 | G | E | 0.0000 | |
| 5 | H | E | -0.4874 | |
| 6 | F | E | -0.1411 | |
| 7 | E | E | -0.0620 | |
| 8 | F | E | 1.2107 | |
| 1 | F | F | 2.1252 | |
| 2 | E | F | 0.4627 | |
| 3 | K | F | -0.3377 | |
| 4 | G | F | 0.0000 | |
| 5 | H | F | -0.7384 | |
| 6 | F | F | -0.1720 | |
| 7 | E | F | 0.3600 | |
| 8 | F | F | 1.7430 | |
| 1 | F | G | 2.4825 | |
| 2 | E | G | 1.1589 | |
| 3 | K | G | -0.3709 | |
| 4 | G | G | 0.0000 | |
| 5 | H | G | -0.7581 | |
| 6 | F | G | -0.4186 | |
| 7 | E | G | 0.0201 | |
| 8 | F | G | 1.3896 | |
| 1 | F | H | 2.3485 | |
| 2 | E | H | 0.7521 | |
| 3 | K | H | -0.4980 | |
| 4 | G | H | 0.0000 | |
| 5 | H | H | -0.9419 | |
| 6 | F | H | -0.4593 | |
| 7 | E | H | 0.0091 | |
| 8 | F | H | 1.2239 | |
| 1 | F | I | 2.3331 | |
| 2 | E | I | 0.8319 | |
| 3 | K | I | -0.5357 | |
| 4 | G | I | 0.0000 | |
| 5 | H | I | -0.6145 | |
| 6 | F | I | -0.3645 | |
| 7 | E | I | -0.0246 | |
| 8 | F | I | 1.4138 | |
| 1 | F | J | 2.1595 | |
| 2 | E | J | 0.4409 | |
| 3 | K | J | -0.4892 | |
| 4 | G | J | 0.0000 | |
| 5 | H | J | -0.6218 | |
| 6 | F | J | -0.3606 | |
| 7 | E | J | 0.1425 | |
| 8 | F | J | 1.3057 | |
| 1 | F | K | 2.2105 | |
| 2 | E | K | 0.7563 | |
| 3 | K | K | -0.3777 | |
| 4 | G | K | 0.0000 | |
| 5 | H | K | -0.6192 | |
| 6 | F | K | -0.4569 | |
| 7 | E | K | -0.1149 | |
| 8 | F | K | 1.1235 | |
| 1 | F | L | 2.4194 | |
| 2 | E | L | 0.9419 | |
| 3 | K | L | -0.7188 | |
| 4 | G | L | 0.0000 | |
| 5 | H | L | -0.5400 | |
| 6 | F | L | -0.2667 | |
| 7 | E | L | 0.0892 | |
| 8 | F | L | 1.3781 | |
| 1 | F | M | 2.2481 | |
| 2 | E | M | 0.6496 | |
| 3 | K | M | -0.6539 | |
| 4 | G | M | 0.0000 | |
| 5 | H | M | -0.7223 | |
| 6 | F | M | -0.3922 | |
| 7 | E | M | 0.0990 | |
| 8 | F | M | 1.2390 | |
| 1 | F | N | 2.3519 | |
| 2 | E | N | 0.7705 | |
| 3 | K | N | -0.7030 | |
| 4 | G | N | 0.0000 | |
| 5 | H | N | -0.5844 | |
| 6 | F | N | -0.3292 | |
| 7 | E | N | 0.0439 | |
| 8 | F | N | 1.2021 | |
| 1 | F | O | 2.3700 | |
| 2 | E | O | 0.9289 | |
| 3 | K | O | -0.6739 | |
| 4 | G | O | 0.0000 | |
| 5 | H | O | -1.1031 | |
| 6 | F | O | -0.6222 | |
| 7 | E | O | -0.0985 | |
| 8 | F | O | 1.2412 | |
| 1 | F | P | 2.2132 | |
| 2 | E | P | 0.3744 | |
| 3 | K | P | -0.8050 | |
| 4 | G | P | 0.0000 | |
| 5 | H | P | -0.9822 | |
| 6 | F | P | -0.5962 | |
| 7 | E | P | -0.1926 | |
| 8 | F | P | 1.1060 | |
| 1 | F | Q | 2.2342 | |
| 2 | E | Q | 0.2738 | |
| 3 | K | Q | -0.7681 | |
| 4 | G | Q | 0.0000 | |
| 5 | H | Q | -0.6341 | |
| 6 | F | Q | -0.5490 | |
| 7 | E | Q | 0.1554 | |
| 8 | F | Q | 1.3042 | |
| 1 | F | R | 2.2844 | |
| 2 | E | R | 0.7506 | |
| 3 | K | R | -0.5765 | |
| 4 | G | R | 0.0000 | |
| 5 | H | R | -0.7323 | |
| 6 | F | R | -0.4888 | |
| 7 | E | R | -0.1191 | |
| 8 | F | R | 1.2441 | |
| 1 | F | S | 1.2678 | |
| 2 | E | S | -1.0221 | |
| 3 | K | S | -1.7526 | |
| 4 | G | S | -1.2437 | |
| 5 | H | S | -1.5542 | |
| 6 | F | S | -0.7716 | |
| 7 | E | S | -0.9195 | |
| 8 | F | S | 1.3424 | |
| 1 | F | T | 2.1001 | |
| 2 | E | T | 0.7214 | |
| 3 | K | T | -0.7783 | |
| 4 | G | T | 0.0000 | |
| 5 | H | T | -1.2269 | |
| 6 | F | T | -0.6987 | |
| 7 | E | T | -0.6673 | |
| 8 | F | T | 0.8957 |