| Chain sequence(s) |
A: GPLPLNPEPPLMSTDEYVKPTDLLLYAETDLLTETGDPTKDIVKDGKVVKPRVSAYDWRVYKLTLPDPNTFPLPSEDFIDPSTEILIWRLLAFKIHVFGPLGKGTYGHAHFNALGDIDNPTSYQHGTADDTQALSWRPKLKQEFIIGDLPPLGVYTAPAAPAPGLPPGAIPPLEKKTTIIEHGDRADIGFGAKDFAKLEPRKDDVPDIILDTKTIVVDYEGMKAEPYGRRMFTHNKREQSRDVRTLVRDGPDPTPLPDAPPPSPLYTKPPPSSPYATPPPYDVFTLPDEGAITEADLLFNKPYILEETEGLNNGILWNNQLYITVLDNTRATIATNTTQISTPAINVYNPADYVTSKTYTREYKLSLIVQLCRIPLTPEILKFLERLDPRILVNSKLPFVPPVVRPDPLAGKKFREIDLTNKLTTDLEKSELGRYYLNK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2181 | |
| 2 | P | A | 0.4327 | |
| 3 | L | A | 1.3820 | |
| 4 | P | A | 0.4434 | |
| 5 | L | A | 0.9494 | |
| 6 | N | A | -1.0334 | |
| 7 | P | A | -1.3918 | |
| 8 | E | A | -2.2051 | |
| 9 | P | A | -1.2834 | |
| 10 | P | A | -0.4492 | |
| 11 | L | A | 0.5085 | |
| 12 | M | A | -0.1947 | |
| 13 | S | A | -0.7982 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -3.1283 | |
| 16 | E | A | -2.8863 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | K | A | -2.6453 | |
| 20 | P | A | -1.8509 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.7104 | |
| 23 | L | A | -0.6270 | |
| 24 | L | A | -0.3521 | |
| 25 | L | A | 0.0000 | |
| 26 | Y | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.8406 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.3837 | |
| 31 | L | A | 0.2331 | |
| 32 | L | A | 0.0000 | |
| 33 | T | A | -0.1896 | |
| 34 | E | A | -0.3839 | |
| 35 | T | A | -0.4691 | |
| 36 | G | A | 0.0000 | |
| 37 | D | A | -1.3695 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.5970 | |
| 40 | K | A | -2.2023 | |
| 41 | D | A | -1.3535 | |
| 42 | I | A | 0.4437 | |
| 43 | V | A | 0.6898 | |
| 44 | K | A | -1.5242 | |
| 45 | D | A | -2.4588 | |
| 46 | G | A | -1.5200 | |
| 47 | K | A | -1.2514 | |
| 48 | V | A | 1.0258 | |
| 49 | V | A | 1.5622 | |
| 50 | K | A | 0.3699 | |
| 51 | P | A | -0.4238 | |
| 52 | R | A | -1.4271 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | Y | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2105 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.6637 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.9649 | |
| 70 | T | A | -0.4416 | |
| 71 | F | A | -0.0115 | |
| 72 | P | A | -0.3108 | |
| 73 | L | A | -0.3705 | |
| 74 | P | A | -0.6927 | |
| 75 | S | A | -1.5153 | |
| 76 | E | A | -2.7870 | |
| 77 | D | A | -2.8035 | |
| 78 | F | A | -1.4443 | |
| 79 | I | A | -1.4945 | |
| 80 | D | A | -2.0917 | |
| 81 | P | A | -1.3073 | |
| 82 | S | A | -0.8683 | |
| 83 | T | A | -0.8098 | |
| 84 | E | A | -1.0490 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3535 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.3631 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.4648 | |
| 99 | G | A | -0.1811 | |
| 100 | P | A | -0.1945 | |
| 101 | L | A | -0.1287 | |
| 102 | G | A | -0.3482 | |
| 103 | K | A | -0.8573 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4603 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.6458 | |
| 108 | H | A | -1.1012 | |
| 109 | A | A | -0.8648 | |
| 110 | H | A | -1.9560 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -1.0325 | |
| 116 | D | A | -1.6450 | |
| 117 | I | A | -1.1064 | |
| 118 | D | A | -2.6279 | |
| 119 | N | A | -2.2852 | |
| 120 | P | A | -1.3993 | |
| 121 | T | A | -0.7774 | |
| 122 | S | A | -0.4331 | |
| 123 | Y | A | 0.1942 | |
| 124 | Q | A | -0.3921 | |
| 125 | H | A | -0.7520 | |
| 126 | G | A | -1.1585 | |
| 127 | T | A | -1.0303 | |
| 128 | A | A | -1.0070 | |
| 129 | D | A | -2.2992 | |
| 130 | D | A | -1.8102 | |
| 131 | T | A | -1.6595 | |
| 132 | Q | A | -1.6355 | |
| 133 | A | A | -0.7435 | |
| 134 | L | A | -0.4166 | |
| 135 | S | A | -0.4965 | |
| 136 | W | A | 0.0000 | |
| 137 | R | A | -0.7691 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | -1.4195 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | L | A | 0.1000 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | 0.0205 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | 0.0000 | |
| 155 | Y | A | -0.8992 | |
| 156 | T | A | -0.9364 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.1647 | |
| 159 | A | A | -0.1430 | |
| 160 | A | A | -0.0257 | |
| 161 | P | A | 0.1124 | |
| 162 | A | A | -0.2036 | |
| 163 | P | A | -0.3975 | |
| 164 | G | A | -0.4532 | |
| 165 | L | A | 0.2185 | |
| 166 | P | A | -0.1483 | |
| 167 | P | A | -0.2612 | |
| 168 | G | A | -0.1045 | |
| 169 | A | A | 0.6012 | |
| 170 | I | A | 2.0140 | |
| 171 | P | A | 1.0967 | |
| 172 | P | A | 0.8255 | |
| 173 | L | A | 0.8690 | |
| 174 | E | A | -1.0853 | |
| 175 | K | A | -2.0215 | |
| 176 | K | A | -1.3913 | |
| 177 | T | A | -0.6474 | |
| 178 | T | A | 0.0249 | |
| 179 | I | A | -0.1392 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.1404 | |
| 182 | H | A | -1.2743 | |
| 183 | G | A | -0.7827 | |
| 184 | D | A | -0.7767 | |
| 185 | R | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.7747 | |
| 190 | F | A | -0.0219 | |
| 191 | G | A | -0.2810 | |
| 192 | A | A | -0.4341 | |
| 193 | K | A | -0.9679 | |
| 194 | D | A | -1.4388 | |
| 195 | F | A | 0.0000 | |
| 196 | A | A | -2.3042 | |
| 197 | K | A | -2.2034 | |
| 198 | L | A | -1.1152 | |
| 199 | E | A | -2.0533 | |
| 200 | P | A | -2.1691 | |
| 201 | R | A | -2.4467 | |
| 202 | K | A | -3.0587 | |
| 203 | D | A | -2.0937 | |
| 204 | D | A | -1.3258 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.7744 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.9172 | |
| 211 | D | A | -2.5709 | |
| 212 | T | A | -1.5340 | |
| 213 | K | A | -1.3506 | |
| 214 | T | A | 0.0000 | |
| 215 | I | A | 0.0000 | |
| 216 | V | A | 0.4023 | |
| 217 | V | A | 0.0000 | |
| 218 | D | A | -0.7680 | |
| 219 | Y | A | -1.3251 | |
| 220 | E | A | -2.4617 | |
| 221 | G | A | -1.6240 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.8558 | |
| 224 | A | A | -1.5241 | |
| 225 | E | A | -1.2294 | |
| 226 | P | A | -0.3922 | |
| 227 | Y | A | -0.2504 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.4058 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.9470 | |
| 234 | H | A | -0.8046 | |
| 235 | N | A | -1.0151 | |
| 236 | K | A | -1.7117 | |
| 237 | R | A | -2.0347 | |
| 238 | E | A | -2.4684 | |
| 239 | Q | A | -1.9306 | |
| 240 | S | A | -2.1721 | |
| 241 | R | A | -2.9348 | |
| 242 | D | A | -2.7577 | |
| 243 | V | A | -1.4261 | |
| 244 | R | A | -2.1395 | |
| 245 | T | A | -1.2702 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | D | A | -1.0312 | |
| 250 | G | A | -1.0201 | |
| 251 | P | A | -0.8203 | |
| 252 | D | A | -0.8351 | |
| 253 | P | A | -0.4112 | |
| 254 | T | A | -0.3970 | |
| 255 | P | A | -0.5856 | |
| 256 | L | A | 0.3352 | |
| 257 | P | A | -0.5978 | |
| 258 | D | A | -1.7320 | |
| 259 | A | A | -0.8836 | |
| 260 | P | A | -1.0087 | |
| 261 | P | A | -0.7211 | |
| 262 | P | A | -0.3823 | |
| 263 | S | A | -0.1810 | |
| 264 | P | A | 0.4103 | |
| 265 | L | A | 1.3541 | |
| 266 | Y | A | 0.8360 | |
| 267 | T | A | -0.0538 | |
| 268 | K | A | -0.5990 | |
| 269 | P | A | -0.2879 | |
| 270 | P | A | -0.4683 | |
| 271 | P | A | -0.4566 | |
| 272 | S | A | -0.3464 | |
| 273 | S | A | -0.1211 | |
| 274 | P | A | 0.0601 | |
| 275 | Y | A | 0.6402 | |
| 276 | A | A | 0.0521 | |
| 277 | T | A | -0.0470 | |
| 278 | P | A | -0.0332 | |
| 279 | P | A | -0.2272 | |
| 280 | P | A | -0.3886 | |
| 281 | Y | A | 0.2992 | |
| 282 | D | A | -0.7784 | |
| 283 | V | A | 0.8693 | |
| 284 | F | A | 0.1809 | |
| 285 | T | A | -0.8353 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | 0.0000 | |
| 289 | E | A | 0.0000 | |
| 290 | G | A | -0.8599 | |
| 291 | A | A | -0.0235 | |
| 292 | I | A | -0.3230 | |
| 293 | T | A | -0.8293 | |
| 294 | E | A | -1.8114 | |
| 295 | A | A | -1.0304 | |
| 296 | D | A | -1.0608 | |
| 297 | L | A | 0.0000 | |
| 298 | L | A | -0.8192 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.0386 | |
| 301 | K | A | -1.2216 | |
| 302 | P | A | -0.5517 | |
| 303 | Y | A | 0.0801 | |
| 304 | I | A | -0.0975 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.4857 | |
| 307 | E | A | -3.1790 | |
| 308 | T | A | -2.1622 | |
| 309 | E | A | -2.5212 | |
| 310 | G | A | -1.4965 | |
| 311 | L | A | -0.5500 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | N | A | -0.5736 | |
| 319 | N | A | -0.5749 | |
| 320 | Q | A | -0.5276 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.2475 | |
| 331 | A | A | 0.0000 | |
| 332 | T | A | -0.2781 | |
| 333 | I | A | -0.3703 | |
| 334 | A | A | -0.5928 | |
| 335 | T | A | -1.0972 | |
| 336 | N | A | -1.1765 | |
| 337 | T | A | -0.0864 | |
| 338 | T | A | 0.5637 | |
| 339 | Q | A | 0.9787 | |
| 340 | I | A | 2.0968 | |
| 341 | S | A | 0.5845 | |
| 342 | T | A | 0.0534 | |
| 343 | P | A | -0.2009 | |
| 344 | A | A | -0.0578 | |
| 345 | I | A | 0.4092 | |
| 346 | N | A | -0.0100 | |
| 347 | V | A | 1.6722 | |
| 348 | Y | A | 1.4953 | |
| 349 | N | A | -0.0299 | |
| 350 | P | A | 0.0620 | |
| 351 | A | A | 0.3267 | |
| 352 | D | A | 0.7491 | |
| 353 | Y | A | 1.3733 | |
| 354 | V | A | 1.9994 | |
| 355 | T | A | 0.2795 | |
| 356 | S | A | -0.8599 | |
| 357 | K | A | -1.7725 | |
| 358 | T | A | -1.0291 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.2235 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.1658 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.5096 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.5008 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -1.4190 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.9324 | |
| 376 | L | A | -0.6278 | |
| 377 | T | A | -0.9405 | |
| 378 | P | A | -1.4894 | |
| 379 | E | A | -2.4248 | |
| 380 | I | A | 0.0000 | |
| 381 | L | A | -1.8533 | |
| 382 | K | A | -3.1133 | |
| 383 | F | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -2.7830 | |
| 386 | R | A | -2.3298 | |
| 387 | L | A | -1.1057 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -1.4290 | |
| 390 | R | A | -1.0308 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.3947 | |
| 394 | N | A | -1.1141 | |
| 395 | S | A | -1.3704 | |
| 396 | K | A | -1.7914 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.2421 | |
| 399 | F | A | 1.6567 | |
| 400 | V | A | 0.8344 | |
| 401 | P | A | 0.6984 | |
| 402 | P | A | 0.5053 | |
| 403 | V | A | 1.7174 | |
| 404 | V | A | 1.4094 | |
| 405 | R | A | -0.6591 | |
| 406 | P | A | -0.8579 | |
| 407 | D | A | -1.2380 | |
| 408 | P | A | -1.0544 | |
| 409 | L | A | 0.0000 | |
| 410 | A | A | -1.0144 | |
| 411 | G | A | -1.3199 | |
| 412 | K | A | -1.7913 | |
| 413 | K | A | -2.5390 | |
| 414 | F | A | -1.6932 | |
| 415 | R | A | -1.7564 | |
| 416 | E | A | -2.5964 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -2.5953 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.3402 | |
| 421 | N | A | -1.7997 | |
| 422 | K | A | -1.6296 | |
| 423 | L | A | -0.6561 | |
| 424 | T | A | -0.8420 | |
| 425 | T | A | -0.9556 | |
| 426 | D | A | -2.3802 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.7006 | |
| 429 | K | A | -3.7182 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -3.0034 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -3.3945 | |
| 435 | Y | A | -1.3952 | |
| 436 | Y | A | -0.7897 | |
| 437 | L | A | -0.5741 | |
| 438 | N | A | -1.7368 | |
| 439 | K | A | -1.8813 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine