| Chain sequence(s) |
L: KYDYRDFIEAYLQKID
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 264 | K | L | -1.4612 | |
| 265 | Y | L | 0.6791 | |
| 266 | D | L | -1.3107 | |
| 267 | Y | L | 0.6568 | |
| 268 | R | L | -1.6918 | |
| 269 | D | L | -0.4562 | |
| 270 | F | L | 2.1832 | |
| 271 | I | L | 2.0920 | |
| 272 | E | L | -0.1144 | |
| 273 | A | L | 0.1677 | |
| 274 | Y | L | 1.3979 | |
| 275 | L | L | 1.9513 | |
| 276 | Q | L | -0.2861 | |
| 277 | K | L | -1.2343 | |
| 278 | I | L | 1.5554 | |
| 279 | D | L | -1.4326 |