| Chain sequence(s) |
A: EDKCSPSGAICSGFGPPEQCCSGACVPHPILRIPVCQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -3.1886 | |
| 2 | D | A | -3.3699 | |
| 3 | K | A | -3.3114 | |
| 4 | C | A | -2.0661 | |
| 5 | S | A | -0.8441 | |
| 6 | P | A | -0.4855 | |
| 7 | S | A | -0.5397 | |
| 8 | G | A | -0.3809 | |
| 9 | A | A | 0.5470 | |
| 10 | I | A | 1.7023 | |
| 11 | C | A | 0.0000 | |
| 12 | S | A | 0.7395 | |
| 13 | G | A | 0.7128 | |
| 14 | F | A | 1.5139 | |
| 15 | G | A | 0.0575 | |
| 16 | P | A | -0.7790 | |
| 17 | P | A | -1.1336 | |
| 18 | E | A | -2.4049 | |
| 19 | Q | A | -1.2803 | |
| 20 | C | A | 0.0000 | |
| 21 | C | A | -0.7516 | |
| 22 | S | A | -0.7321 | |
| 23 | G | A | -1.0959 | |
| 24 | A | A | -0.7619 | |
| 25 | C | A | 0.0914 | |
| 26 | V | A | -0.0900 | |
| 27 | P | A | -0.0044 | |
| 28 | H | A | 0.3600 | |
| 29 | P | A | 0.5782 | |
| 30 | I | A | 2.0706 | |
| 31 | L | A | 1.6615 | |
| 32 | R | A | -0.3775 | |
| 33 | I | A | 0.7604 | |
| 34 | P | A | 0.4298 | |
| 35 | V | A | 0.0000 | |
| 36 | C | A | 0.0000 | |
| 37 | Q | A | -1.1024 |