Project name: query_structure

Status: done

Started: 2026-03-16 20:08:40
Settings
Chain sequence(s) A: EDKCSPSGAICSGFGPPEQCCSGACVPHPILRIPVCQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:12)
Show buried residues

Minimal score value
-3.3699
Maximal score value
2.0706
Average score
-0.3642
Total score value
-13.4749

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -3.1886
2 D A -3.3699
3 K A -3.3114
4 C A -2.0661
5 S A -0.8441
6 P A -0.4855
7 S A -0.5397
8 G A -0.3809
9 A A 0.5470
10 I A 1.7023
11 C A 0.0000
12 S A 0.7395
13 G A 0.7128
14 F A 1.5139
15 G A 0.0575
16 P A -0.7790
17 P A -1.1336
18 E A -2.4049
19 Q A -1.2803
20 C A 0.0000
21 C A -0.7516
22 S A -0.7321
23 G A -1.0959
24 A A -0.7619
25 C A 0.0914
26 V A -0.0900
27 P A -0.0044
28 H A 0.3600
29 P A 0.5782
30 I A 2.0706
31 L A 1.6615
32 R A -0.3775
33 I A 0.7604
34 P A 0.4298
35 V A 0.0000
36 C A 0.0000
37 Q A -1.1024
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Laboratory of Theory of Biopolymers 2018